RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 UBE2L6O14933 153 aa17.96■□□□□ 0.47
HOXB3-201ENST00000311626 A0A1B0GV72 72 aa17.95■□□□□ 0.46
HOXB3-201ENST00000311626 GAGE6Q13070 117 aa17.95■□□□□ 0.46
HOXB3-201ENST00000311626 PDZD2O15018 2839 aa17.95■□□□□ 0.46
HOXB3-201ENST00000311626 IFITM1P13164 125 aa17.95■□□□□ 0.46
HOXB3-201ENST00000311626 F5H768 121 aa17.94■□□□□ 0.46
HOXB3-201ENST00000311626 ANK3Q12955 4377 aaKnown RBP17.94■□□□□ 0.46
HOXB3-201ENST00000311626 TMEM243Q9BU79 118 aa17.93■□□□□ 0.46
HOXB3-201ENST00000311626 UBE2WQ96B02 151 aa17.93■□□□□ 0.46
HOXB3-201ENST00000311626 NBEAL2Q6ZNJ1 2754 aa17.93■□□□□ 0.46
HOXB3-201ENST00000311626 M0QXV9 152 aa17.92■□□□□ 0.46
HOXB3-201ENST00000311626 CRLF1O75462 422 aa17.92■□□□□ 0.46
HOXB3-201ENST00000311626 TRGV4A0A0C4DH28 118 aa17.92■□□□□ 0.46
HOXB3-201ENST00000311626 KRTAP1-1Q07627 177 aa17.92■□□□□ 0.46
HOXB3-201ENST00000311626 C19orf73Q9NVV2 129 aa17.92■□□□□ 0.46
HOXB3-201ENST00000311626 LST1O00453 97 aa17.91■□□□□ 0.46
HOXB3-201ENST00000311626 TMEM262E9PQX1 116 aa17.9■□□□□ 0.46
HOXB3-201ENST00000311626 TOMM7Q9P0U1 55 aa17.9■□□□□ 0.46
HOXB3-201ENST00000311626 CSDC2Q9Y534 153 aaKnown RBP17.9■□□□□ 0.46
HOXB3-201ENST00000311626 C16orf74Q96GX8 76 aa17.89■□□□□ 0.45
HOXB3-201ENST00000311626 IGLV4-60A0A075B6I1 120 aa17.88■□□□□ 0.45
HOXB3-201ENST00000311626 TRAV8-4A0A0B4J246 113 aa17.88■□□□□ 0.45
HOXB3-201ENST00000311626 IGLV1-51P01701 117 aa17.87■□□□□ 0.45
HOXB3-201ENST00000311626 CSNK1G2-AS1Q8NCQ2 148 aa17.87■□□□□ 0.45
HOXB3-201ENST00000311626 RNF183Q96D59 192 aa17.87■□□□□ 0.45
HOXB3-201ENST00000311626 GCN1Q92616 2671 aaKnown RBP17.87■□□□□ 0.45
HOXB3-201ENST00000311626 FAM19A3Q7Z5A8 133 aa17.86■□□□□ 0.45
HOXB3-201ENST00000311626 DEFB130BP0DP73 79 aa17.85■□□□□ 0.45
HOXB3-201ENST00000311626 DEFB130AP0DP74 79 aa17.85■□□□□ 0.45
HOXB3-201ENST00000311626 SMR3AQ99954 134 aa17.83■□□□□ 0.44
HOXB3-201ENST00000311626 CHCHD5Q9BSY4 110 aa17.83■□□□□ 0.44
HOXB3-201ENST00000311626 FHL2Q14192 279 aa17.83■□□□□ 0.44
HOXB3-201ENST00000311626 RNASE1P07998 156 aaKnown RBP17.82■□□□□ 0.44
HOXB3-201ENST00000311626 H3BT86 120 aa17.81■□□□□ 0.44
HOXB3-201ENST00000311626 CITED1Q99966 193 aa17.81■□□□□ 0.44
HOXB3-201ENST00000311626 TEX29Q8N6K0 151 aa17.81■□□□□ 0.44
HOXB3-201ENST00000311626 TRAV26-1A0A087WT03 109 aa17.8■□□□□ 0.44
HOXB3-201ENST00000311626 TRBV6-4A0A1B0GX49 114 aa17.8■□□□□ 0.44
HOXB3-201ENST00000311626 SNCGO76070 127 aa17.8■□□□□ 0.44
HOXB3-201ENST00000311626 TTC32Q5I0X7 151 aa17.8■□□□□ 0.44
HOXB3-201ENST00000311626 LINC01600Q96MT4 127 aa17.8■□□□□ 0.44
HOXB3-201ENST00000311626 C5orf38Q86SI9 138 aa17.79■□□□□ 0.44
HOXB3-201ENST00000311626 C15orf53Q8NAA6 179 aa17.79■□□□□ 0.44
HOXB3-201ENST00000311626 COX7B2Q8TF08 81 aa17.79■□□□□ 0.44
HOXB3-201ENST00000311626 C11orf68Q9H3H3 251 aaKnown RBP17.79■□□□□ 0.44
HOXB3-201ENST00000311626 MIR7-3HGQ8N6C7 128 aa17.78■□□□□ 0.44
HOXB3-201ENST00000311626 OVOL2Q9BRP0 275 aa17.78■□□□□ 0.44
HOXB3-201ENST00000311626 C16orf95Q9H693 158 aa17.78■□□□□ 0.44
HOXB3-201ENST00000311626 A0A096LPF7 62 aa17.77■□□□□ 0.44
HOXB3-201ENST00000311626 COX7A2LO14548 114 aa17.77■□□□□ 0.44
HOXB3-201ENST00000311626 FAM218AQ96MZ4 157 aa17.77■□□□□ 0.44
HOXB3-201ENST00000311626 VWFP04275 2813 aa17.77■□□□□ 0.43
HOXB3-201ENST00000311626 TRBV6-8A0A0A6YYG3 113 aa17.77■□□□□ 0.43
HOXB3-201ENST00000311626 SHISA2Q6UWI4 295 aa17.77■□□□□ 0.43
HOXB3-201ENST00000311626 CMC4P56277 68 aaPredicted RBP17.75■□□□□ 0.43
HOXB3-201ENST00000311626 KRTAP10-3P60369 221 aa17.75■□□□□ 0.43
HOXB3-201ENST00000311626 HERV-K104P63124 156 aa17.75■□□□□ 0.43
HOXB3-201ENST00000311626 FASNP49327 2511 aaKnown RBP17.74■□□□□ 0.43
HOXB3-201ENST00000311626 LINC00158P58513 81 aa17.74■□□□□ 0.43
HOXB3-201ENST00000311626 GAGE2BQ13066 116 aa17.74■□□□□ 0.43
HOXB3-201ENST00000311626 GAGE2EQ4V326 116 aa17.74■□□□□ 0.43
HOXB3-201ENST00000311626 ANAPC13Q9BS18 74 aa17.74■□□□□ 0.43
HOXB3-201ENST00000311626 GAGE2DQ9UEU5 116 aa17.74■□□□□ 0.43
HOXB3-201ENST00000311626 CLPSL2Q6UWE3 100 aa17.74■□□□□ 0.43
HOXB3-201ENST00000311626 HELZ2Q9BYK8 2649 aaKnown RBP17.73■□□□□ 0.43
HOXB3-201ENST00000311626 PFN2P35080 140 aa17.73■□□□□ 0.43
HOXB3-201ENST00000311626 LINC00337Q8N6G1 96 aa17.72■□□□□ 0.43
HOXB3-201ENST00000311626 SPATA3Q8NHX4 192 aa17.72■□□□□ 0.43
HOXB3-201ENST00000311626 HIVEP2P31629 2446 aa17.72■□□□□ 0.43
HOXB3-201ENST00000311626 Q9HAA7 133 aa17.71■□□□□ 0.43
HOXB3-201ENST00000311626 IGHV3OR16-9A0A0B4J2B5 98 aa17.7■□□□□ 0.42
HOXB3-201ENST00000311626 IGKV2-28A0A075B6P5 120 aa17.69■□□□□ 0.42
HOXB3-201ENST00000311626 IGKV2D-28P01615 120 aa17.69■□□□□ 0.42
HOXB3-201ENST00000311626 COPS9Q8WXC6 57 aa17.69■□□□□ 0.42
HOXB3-201ENST00000311626 GYPEP15421 78 aa17.69■□□□□ 0.42
HOXB3-201ENST00000311626 SND1-IT1Q9HBX3 110 aa17.69■□□□□ 0.42
HOXB3-201ENST00000311626 DEFB4AO15263 64 aa17.68■□□□□ 0.42
HOXB3-201ENST00000311626 UNC79Q9P2D8 2635 aa17.68■□□□□ 0.42
HOXB3-201ENST00000311626 PF4P02776 101 aa17.67■□□□□ 0.42
HOXB3-201ENST00000311626 XCL1P47992 114 aa17.67■□□□□ 0.42
HOXB3-201ENST00000311626 FAM110AQ9BQ89 295 aa17.67■□□□□ 0.42
HOXB3-201ENST00000311626 NOTCH2Q04721 2471 aa17.67■□□□□ 0.42
HOXB3-201ENST00000311626 BAALC-AS2P0C853 105 aa17.67■□□□□ 0.42
HOXB3-201ENST00000311626 NHLRC4P0CG21 123 aaPredicted RBP17.67■□□□□ 0.42
HOXB3-201ENST00000311626 LINC00482Q8N8I6 264 aa17.67■□□□□ 0.42
HOXB3-201ENST00000311626 HILS1P60008 231 aa17.66■□□□□ 0.42
HOXB3-201ENST00000311626 CRPP02741 224 aa17.65■□□□□ 0.42
HOXB3-201ENST00000311626 CCL18P55774 89 aa17.65■□□□□ 0.42
HOXB3-201ENST00000311626 LINC00959A0A1B0GUT2 108 aa17.65■□□□□ 0.42
HOXB3-201ENST00000311626 DEFB121Q5J5C9 76 aa17.64■□□□□ 0.41
HOXB3-201ENST00000311626 C22orf24Q9Y442 160 aa17.64■□□□□ 0.41
HOXB3-201ENST00000311626 NDUFV3P56181 108 aaKnown RBP17.63■□□□□ 0.41
HOXB3-201ENST00000311626 A0A087WZ39 114 aa17.61■□□□□ 0.41
HOXB3-201ENST00000311626 Q8N3U1 123 aa17.61■□□□□ 0.41
HOXB3-201ENST00000311626 SMIM11BQ8TCY0 68 aa17.61■□□□□ 0.41
HOXB3-201ENST00000311626 TRAV13-2A0A0B4J235 113 aa17.6■□□□□ 0.41
HOXB3-201ENST00000311626 A0A087WYN8 130 aa17.59■□□□□ 0.41
HOXB3-201ENST00000311626 ATP5G1P05496 136 aa17.59■□□□□ 0.41
HOXB3-201ENST00000311626 C6orf226Q5I0X4 101 aa17.59■□□□□ 0.41
HOXB3-201ENST00000311626 X6R8D5 127 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms