RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 CDC42SE2Q9NRR3 84 aa15.68■□□□□ 0.1
PDLIM2-202ENST00000308354 NBEAL1Q6ZS30 2694 aa15.67■□□□□ 0.1
PDLIM2-202ENST00000308354 TRAV13-1A0A0B4J241 112 aa15.67■□□□□ 0.1
PDLIM2-202ENST00000308354 APOMO95445 188 aa15.67■□□□□ 0.1
PDLIM2-202ENST00000308354 PGPEP1Q9NXJ5 209 aa15.67■□□□□ 0.1
PDLIM2-202ENST00000308354 NDUFA12Q9UI09 145 aa15.67■□□□□ 0.1
PDLIM2-202ENST00000308354 ATP5G1P05496 136 aa15.66■□□□□ 0.1
PDLIM2-202ENST00000308354 CHCHD5Q9BSY4 110 aa15.66■□□□□ 0.1
PDLIM2-202ENST00000308354 F5H768 121 aa15.66■□□□□ 0.1
PDLIM2-202ENST00000308354 TRAV26-1A0A087WT03 109 aa15.65■□□□□ 0.1
PDLIM2-202ENST00000308354 HERVK_113P63121 156 aa15.65■□□□□ 0.1
PDLIM2-202ENST00000308354 TMEM238C9JI98 176 aa15.64■□□□□ 0.09
PDLIM2-202ENST00000308354 SMAGPQ0VAQ4 97 aa15.64■□□□□ 0.09
PDLIM2-202ENST00000308354 TENM3Q9P273 2699 aa15.63■□□□□ 0.09
PDLIM2-202ENST00000308354 CFC1BP0CG36 223 aa15.63■□□□□ 0.09
PDLIM2-202ENST00000308354 CFC1P0CG37 223 aa15.63■□□□□ 0.09
PDLIM2-202ENST00000308354 TMEM101Q96IK0 257 aa15.63■□□□□ 0.09
PDLIM2-202ENST00000308354 FAM19A3Q7Z5A8 133 aa15.63■□□□□ 0.09
PDLIM2-202ENST00000308354 LITAFQ99732 161 aa15.63■□□□□ 0.09
PDLIM2-202ENST00000308354 IGLV4-60A0A075B6I1 120 aa15.62■□□□□ 0.09
PDLIM2-202ENST00000308354 ZFAND6Q6FIF0 208 aa15.62■□□□□ 0.09
PDLIM2-202ENST00000308354 DNAH3Q8TD57 4116 aa15.62■□□□□ 0.09
PDLIM2-202ENST00000308354 MUSTN1Q8IVN3 82 aa15.62■□□□□ 0.09
PDLIM2-202ENST00000308354 MDFIQ99750 246 aa15.62■□□□□ 0.09
PDLIM2-202ENST00000308354 A4D1N5 150 aa15.61■□□□□ 0.09
PDLIM2-202ENST00000308354 TSPAN13O95857 204 aa15.61■□□□□ 0.09
PDLIM2-202ENST00000308354 IGKV3OR2-268A0A0C4DH90 116 aa15.6■□□□□ 0.09
PDLIM2-202ENST00000308354 H7C423 109 aa15.6■□□□□ 0.09
PDLIM2-202ENST00000308354 MGAM2Q2M2H8 2515 aa15.6■□□□□ 0.09
PDLIM2-202ENST00000308354 ADAMTSL4-AS1Q5T5F5 129 aa15.59■□□□□ 0.09
PDLIM2-202ENST00000308354 SFTA2Q6UW10 78 aa15.59■□□□□ 0.09
PDLIM2-202ENST00000308354 IGLV5-39A0A0G2JS06 123 aa15.58■□□□□ 0.08
PDLIM2-202ENST00000308354 EIF4EBP3O60516 100 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-202ENST00000308354 RPL24P83731 157 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-202ENST00000308354 SMIM1B2RUZ4 78 aa15.57■□□□□ 0.08
PDLIM2-202ENST00000308354 TMEM262E9PQX1 116 aa15.57■□□□□ 0.08
PDLIM2-202ENST00000308354 OCIAD2Q56VL3 154 aa15.57■□□□□ 0.08
PDLIM2-202ENST00000308354 H3BMG7 143 aa15.56■□□□□ 0.08
PDLIM2-202ENST00000308354 NDUFA1O15239 70 aa15.55■□□□□ 0.08
PDLIM2-202ENST00000308354 PRSS2P07478 247 aa15.55■□□□□ 0.08
PDLIM2-202ENST00000308354 PRO1854Q9UHT4 67 aa15.55■□□□□ 0.08
PDLIM2-202ENST00000308354 LOC107984156A0A0G2JMH3 177 aa15.53■□□□□ 0.08
PDLIM2-202ENST00000308354 ARL17AQ8IVW1 177 aa15.53■□□□□ 0.08
PDLIM2-202ENST00000308354 SPANXDQ9BXN6 97 aa15.53■□□□□ 0.08
PDLIM2-202ENST00000308354 SPANXCQ9NY87 97 aa15.53■□□□□ 0.08
PDLIM2-202ENST00000308354 A0A0J9YWU9 116 aa15.53■□□□□ 0.08
PDLIM2-202ENST00000308354 MIAQ16674 131 aa15.52■□□□□ 0.08
PDLIM2-202ENST00000308354 Q9H8V8 135 aa15.52■□□□□ 0.08
PDLIM2-202ENST00000308354 NPC2P61916 151 aa15.52■□□□□ 0.07
PDLIM2-202ENST00000308354 Q6ZTC4 211 aa15.52■□□□□ 0.07
PDLIM2-202ENST00000308354 DEFB121Q5J5C9 76 aa15.51■□□□□ 0.07
PDLIM2-202ENST00000308354 MRAPQ8TCY5 172 aa15.51■□□□□ 0.07
PDLIM2-202ENST00000308354 TEX48A0A1B0GUV7 120 aa15.51■□□□□ 0.07
PDLIM2-202ENST00000308354 K7EIL1 84 aa15.51■□□□□ 0.07
PDLIM2-202ENST00000308354 Q8N3U1 123 aa15.51■□□□□ 0.07
PDLIM2-202ENST00000308354 DAND5Q8N907 189 aa15.51■□□□□ 0.07
PDLIM2-202ENST00000308354 A0A0B4J2C4 111 aa15.5■□□□□ 0.07
PDLIM2-202ENST00000308354 MRPL23Q16540 153 aaKnown RBP15.5■□□□□ 0.07
PDLIM2-202ENST00000308354 RNF151Q2KHN1 245 aa15.49■□□□□ 0.07
PDLIM2-202ENST00000308354 MTURNQ8N3F0 131 aa15.49■□□□□ 0.07
PDLIM2-202ENST00000308354 ZNF625Q96I27 306 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-202ENST00000308354 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-202ENST00000308354 CLPSL2Q6UWE3 100 aa15.49■□□□□ 0.07
PDLIM2-202ENST00000308354 ICOSQ9Y6W8 199 aa15.49■□□□□ 0.07
PDLIM2-202ENST00000308354 TIMM17BO60830 172 aa15.48■□□□□ 0.07
PDLIM2-202ENST00000308354 IGHV3-33P01772 117 aa15.48■□□□□ 0.07
PDLIM2-202ENST00000308354 C11orf68Q9H3H3 251 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-202ENST00000308354 H7C2G1 150 aa15.47■□□□□ 0.07
PDLIM2-202ENST00000308354 NANOS2P60321 138 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-202ENST00000308354 WFDC2Q14508 124 aa15.47■□□□□ 0.07
PDLIM2-202ENST00000308354 F8W1H4 67 aa15.46■□□□□ 0.07
PDLIM2-202ENST00000308354 K7ERU9 68 aa15.46■□□□□ 0.07
PDLIM2-202ENST00000308354 PSMB2P49721 201 aa15.45■□□□□ 0.06
PDLIM2-202ENST00000308354 A0A1B0GUV1 79 aa15.45■□□□□ 0.06
PDLIM2-202ENST00000308354 A0A0U1RRA0 63 aa15.44■□□□□ 0.06
PDLIM2-202ENST00000308354 PRO0461Q9UI25 63 aa15.44■□□□□ 0.06
PDLIM2-202ENST00000308354 ERG28Q9UKR5 140 aa15.44■□□□□ 0.06
PDLIM2-202ENST00000308354 CIRBPQ14011 172 aaKnown RBP15.44■□□□□ 0.06
PDLIM2-202ENST00000308354 LINC00959A0A1B0GUT2 108 aa15.43■□□□□ 0.06
PDLIM2-202ENST00000308354 LYRM7Q5U5X0 104 aa15.43■□□□□ 0.06
PDLIM2-202ENST00000308354 VPS25Q9BRG1 176 aa15.43■□□□□ 0.06
PDLIM2-202ENST00000308354 IGHV3OR16-9A0A0B4J2B5 98 aa15.42■□□□□ 0.06
PDLIM2-202ENST00000308354 TCL1BO95988 128 aa15.42■□□□□ 0.06
PDLIM2-202ENST00000308354 C11orf45Q8TAV5 145 aa15.42■□□□□ 0.06
PDLIM2-202ENST00000308354 KPRPQ5T749 579 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-202ENST00000308354 LINC00269Q8N2A0 174 aa15.41■□□□□ 0.06
PDLIM2-202ENST00000308354 SCGB1C2P0DMR2 95 aa15.41■□□□□ 0.06
PDLIM2-202ENST00000308354 IFITM1P13164 125 aa15.41■□□□□ 0.06
PDLIM2-202ENST00000308354 Q1RN00 199 aa15.41■□□□□ 0.06
PDLIM2-202ENST00000308354 XCL1P47992 114 aa15.4■□□□□ 0.06
PDLIM2-202ENST00000308354 MEIG1Q5JSS6 88 aa15.4■□□□□ 0.06
PDLIM2-202ENST00000308354 C5orf38Q86SI9 138 aa15.4■□□□□ 0.06
PDLIM2-202ENST00000308354 SPATA25Q9BR10 227 aa15.4■□□□□ 0.06
PDLIM2-202ENST00000308354 ANGP03950 147 aaKnown RBP15.39■□□□□ 0.05
PDLIM2-202ENST00000308354 LELP1Q5T871 98 aa15.39■□□□□ 0.05
PDLIM2-202ENST00000308354 LYPD5Q6UWN5 251 aa15.39■□□□□ 0.05
PDLIM2-202ENST00000308354 COX7B2Q8TF08 81 aa15.39■□□□□ 0.05
PDLIM2-202ENST00000308354 TOMM7Q9P0U1 55 aa15.39■□□□□ 0.05
PDLIM2-202ENST00000308354 SH2D6Q7Z4S9 175 aa15.39■□□□□ 0.05
PDLIM2-202ENST00000308354 LINC00308Q8TCZ7 52 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms