RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 IGKV4-1P06312 121 aa7.71□□□□□ -1.17
SYNPO2-201ENST00000307142 ZNF22P17026 224 aaPredicted RBP7.71□□□□□ -1.17
SYNPO2-201ENST00000307142 SPINK6Q6UWN8 80 aa7.71□□□□□ -1.17
SYNPO2-201ENST00000307142 FHL2Q14192 279 aa7.71□□□□□ -1.17
SYNPO2-201ENST00000307142 C14orf132Q9NPU4 83 aa7.71□□□□□ -1.17
SYNPO2-201ENST00000307142 ZNF462Q96JM2 2506 aa7.71□□□□□ -1.17
SYNPO2-201ENST00000307142 K7EP13 123 aa7.71□□□□□ -1.17
SYNPO2-201ENST00000307142 Q8N2B8 174 aa7.71□□□□□ -1.17
SYNPO2-201ENST00000307142 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.18
SYNPO2-201ENST00000307142 CEP295Q9C0D2 2601 aa7.71□□□□□ -1.18
SYNPO2-201ENST00000307142 IGKV3D-7A0A0C4DH55 119 aa7.71□□□□□ -1.18
SYNPO2-201ENST00000307142 MP68P56378 58 aa7.7□□□□□ -1.18
SYNPO2-201ENST00000307142 RNASE8Q8TDE3 154 aaKnown RBP7.7□□□□□ -1.18
SYNPO2-201ENST00000307142 M0R378 163 aa7.7□□□□□ -1.18
SYNPO2-201ENST00000307142 NRACQ8N912 160 aa7.7□□□□□ -1.18
SYNPO2-201ENST00000307142 A8MZ25 164 aa7.7□□□□□ -1.18
SYNPO2-201ENST00000307142 M0QXV9 152 aa7.7□□□□□ -1.18
SYNPO2-201ENST00000307142 MDFIQ99750 246 aa7.7□□□□□ -1.18
SYNPO2-201ENST00000307142 HIGD1BQ9P298 99 aa7.7□□□□□ -1.18
SYNPO2-201ENST00000307142 PYGO1Q9Y3Y4 419 aa7.7□□□□□ -1.18
SYNPO2-201ENST00000307142 CITED1Q99966 193 aa7.69□□□□□ -1.18
SYNPO2-201ENST00000307142 MYO9AB2RTY4 2548 aa7.69□□□□□ -1.18
SYNPO2-201ENST00000307142 USP17L23D6RBM5 183 aa7.68□□□□□ -1.18
SYNPO2-201ENST00000307142 SBSPONQ8IVN8 264 aa7.68□□□□□ -1.18
SYNPO2-201ENST00000307142 CEP350Q5VT06 3117 aa7.68□□□□□ -1.18
SYNPO2-201ENST00000307142 A0A0B4J2C4 111 aa7.68□□□□□ -1.18
SYNPO2-201ENST00000307142 CYSRT1A8MQ03 144 aa7.68□□□□□ -1.18
SYNPO2-201ENST00000307142 SLPIP03973 132 aa7.68□□□□□ -1.18
SYNPO2-201ENST00000307142 WFDC10BQ8IUB3 73 aa7.68□□□□□ -1.18
SYNPO2-201ENST00000307142 CDC42SE2Q9NRR3 84 aa7.68□□□□□ -1.18
SYNPO2-201ENST00000307142 C6orf223Q8N319 242 aa7.68□□□□□ -1.18
SYNPO2-201ENST00000307142 ACYP1P07311 99 aa7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 MRPS36P82909 103 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 LYPD5Q6UWN5 251 aa7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 LINC00308Q8TCZ7 52 aa7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 CDPF1Q6NVV7 123 aa7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 FASNP49327 2511 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 MRPS12O15235 138 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 COX17Q14061 63 aa7.67□□□□□ -1.18
SYNPO2-201ENST00000307142 CELA1Q9UNI1 258 aa7.66□□□□□ -1.18
SYNPO2-201ENST00000307142 LINC01556Q5JQF7 62 aa7.66□□□□□ -1.18
SYNPO2-201ENST00000307142 CIRBP-AS1Q8TBR5 109 aa7.66□□□□□ -1.18
SYNPO2-201ENST00000307142 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
SYNPO2-201ENST00000307142 C6orf99Q4VX62 202 aa7.66□□□□□ -1.18
SYNPO2-201ENST00000307142 SPATA12Q7Z6I5 190 aa7.65□□□□□ -1.18
SYNPO2-201ENST00000307142 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.18
SYNPO2-201ENST00000307142 PDE6GP18545 87 aa7.65□□□□□ -1.18
SYNPO2-201ENST00000307142 C1orf137Q5JT78 98 aa7.65□□□□□ -1.18
SYNPO2-201ENST00000307142 DOPEY1Q5JWR5 2465 aa7.65□□□□□ -1.18
SYNPO2-201ENST00000307142 BEAN1Q3B7T3 259 aa7.65□□□□□ -1.19
SYNPO2-201ENST00000307142 BPY2O14599 106 aa7.64□□□□□ -1.19
SYNPO2-201ENST00000307142 Q8IZM0 81 aa7.64□□□□□ -1.19
SYNPO2-201ENST00000307142 WFDC9Q8NEX5 89 aa7.64□□□□□ -1.19
SYNPO2-201ENST00000307142 TRBV30A0A0K0K1B3 111 aa7.64□□□□□ -1.19
SYNPO2-201ENST00000307142 CASC2Q6XLA1 102 aa7.64□□□□□ -1.19
SYNPO2-201ENST00000307142 IGLV4-60A0A075B6I1 120 aa7.63□□□□□ -1.19
SYNPO2-201ENST00000307142 UNQ6190/PRO20217Q6UXQ8 127 aa7.63□□□□□ -1.19
SYNPO2-201ENST00000307142 UPK3BQ9BT76 320 aa7.63□□□□□ -1.19
SYNPO2-201ENST00000307142 GAS8-AS1O95177 125 aa7.63□□□□□ -1.19
SYNPO2-201ENST00000307142 POLR2KP53803 58 aaKnown RBP7.63□□□□□ -1.19
SYNPO2-201ENST00000307142 C9orf116Q5BN46 136 aaPredicted RBP7.63□□□□□ -1.19
SYNPO2-201ENST00000307142 REG3GQ6UW15 175 aa7.63□□□□□ -1.19
SYNPO2-201ENST00000307142 COX6A2Q02221 97 aa7.62□□□□□ -1.19
SYNPO2-201ENST00000307142 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
SYNPO2-201ENST00000307142 MUC7Q8TAX7 377 aa7.61□□□□□ -1.19
SYNPO2-201ENST00000307142 USP9XQ93008 2570 aaPredicted RBP7.61□□□□□ -1.19
SYNPO2-201ENST00000307142 C3orf84H3BNL1 204 aa7.61□□□□□ -1.19
SYNPO2-201ENST00000307142 POM121L12Q8N7R1 296 aa7.61□□□□□ -1.19
SYNPO2-201ENST00000307142 TCL1BO95988 128 aa7.61□□□□□ -1.19
SYNPO2-201ENST00000307142 SEC61GP60059 68 aa7.61□□□□□ -1.19
SYNPO2-201ENST00000307142 Q6ZSN1 163 aa7.61□□□□□ -1.19
SYNPO2-201ENST00000307142 SS18L2Q9UHA2 77 aa7.6□□□□□ -1.19
SYNPO2-201ENST00000307142 LINC00694P0DN24 101 aa7.6□□□□□ -1.19
SYNPO2-201ENST00000307142 WWC2-AS2Q96NR7 200 aa7.6□□□□□ -1.19
SYNPO2-201ENST00000307142 EGFEM1PQ0D2K5 195 aa7.59□□□□□ -1.19
SYNPO2-201ENST00000307142 SCXQ7RTU7 201 aa7.59□□□□□ -1.19
SYNPO2-201ENST00000307142 CCKP06307 115 aa7.58□□□□□ -1.2
SYNPO2-201ENST00000307142 MAPKAPK5-AS1Q8N8E1 139 aa7.58□□□□□ -1.2
SYNPO2-201ENST00000307142 MUC4Q99102 2169 aa7.58□□□□□ -1.2
SYNPO2-201ENST00000307142 H3BT86 120 aa7.58□□□□□ -1.2
SYNPO2-201ENST00000307142 ZNF73O43830 326 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-201ENST00000307142 WFDC2Q14508 124 aa7.57□□□□□ -1.2
SYNPO2-201ENST00000307142 TEN1Q86WV5 123 aa7.57□□□□□ -1.2
SYNPO2-201ENST00000307142 PKD1L2Q7Z442 2459 aa7.57□□□□□ -1.2
SYNPO2-201ENST00000307142 SMIM11BQ8TCY0 68 aa7.57□□□□□ -1.2
SYNPO2-201ENST00000307142 CNFNQ9BYD5 112 aa7.57□□□□□ -1.2
SYNPO2-201ENST00000307142 TIMM17BO60830 172 aa7.57□□□□□ -1.2
SYNPO2-201ENST00000307142 C5orf47Q569G3 176 aa7.56□□□□□ -1.2
SYNPO2-201ENST00000307142 LINC00242Q5T6M2 205 aa7.56□□□□□ -1.2
SYNPO2-201ENST00000307142 C16orf90A8MZG2 172 aa7.56□□□□□ -1.2
SYNPO2-201ENST00000307142 Q6ZQY7 126 aa7.56□□□□□ -1.2
SYNPO2-201ENST00000307142 FAM229AH3BQW9 127 aa7.56□□□□□ -1.2
SYNPO2-201ENST00000307142 ESRGQ1W209 222 aa7.56□□□□□ -1.2
SYNPO2-201ENST00000307142 C2CD3Q4AC94 2353 aa7.55□□□□□ -1.2
SYNPO2-201ENST00000307142 MRPL55Q7Z7F7 128 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-201ENST00000307142 TRIAP1O43715 76 aa7.54□□□□□ -1.2
SYNPO2-201ENST00000307142 NDUFC2-KCTD14E9PQ53 114 aa7.54□□□□□ -1.2
SYNPO2-201ENST00000307142 XGP55808 180 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms