RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FAM19A5Q7Z5A7 132 aaPredicted RBP9.47□□□□□ -0.89
TRIM35-201ENST00000305364 NCR3O14931 201 aa9.47□□□□□ -0.89
TRIM35-201ENST00000305364 IGLV1-40P01703 118 aa9.47□□□□□ -0.89
TRIM35-201ENST00000305364 TNRC18O15417 2968 aaPredicted RBP9.47□□□□□ -0.89
TRIM35-201ENST00000305364 A0A087WVE0 104 aa9.47□□□□□ -0.89
TRIM35-201ENST00000305364 RPL18AQ02543 176 aaKnown RBP9.47□□□□□ -0.89
TRIM35-201ENST00000305364 CXCL5P42830 114 aa9.46□□□□□ -0.89
TRIM35-201ENST00000305364 UBL5Q9BZL1 73 aa9.46□□□□□ -0.9
TRIM35-201ENST00000305364 LAMTOR3Q9UHA4 124 aa9.46□□□□□ -0.9
TRIM35-201ENST00000305364 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
TRIM35-201ENST00000305364 LRBAP50851 2863 aa9.45□□□□□ -0.9
TRIM35-201ENST00000305364 RBMY1FQ15415 496 aaKnown RBP9.45□□□□□ -0.9
TRIM35-201ENST00000305364 LRRC75A-AS1Q8N1F1 130 aa9.45□□□□□ -0.9
TRIM35-201ENST00000305364 K7EQD1 137 aa9.45□□□□□ -0.9
TRIM35-201ENST00000305364 NOP10Q9NPE3 64 aaKnown RBP9.45□□□□□ -0.9
TRIM35-201ENST00000305364 MAST4O15021 2626 aa9.45□□□□□ -0.9
TRIM35-201ENST00000305364 TRAV23DV6A0A075B6W5 121 aa9.45□□□□□ -0.9
TRIM35-201ENST00000305364 SMIM9A6NGZ8 99 aa9.45□□□□□ -0.9
TRIM35-201ENST00000305364 SMIM1B2RUZ4 78 aa9.45□□□□□ -0.9
TRIM35-201ENST00000305364 ATRQ13535 2644 aa9.45□□□□□ -0.9
TRIM35-201ENST00000305364 USP17L23D6RBM5 183 aa9.44□□□□□ -0.9
TRIM35-201ENST00000305364 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
TRIM35-201ENST00000305364 CFAP46Q8IYW2 2715 aa9.44□□□□□ -0.9
TRIM35-201ENST00000305364 HAMPP81172 84 aa9.44□□□□□ -0.9
TRIM35-201ENST00000305364 KLK9Q2XQG4 91 aa9.44□□□□□ -0.9
TRIM35-201ENST00000305364 SERP2Q8N6R1 65 aa9.44□□□□□ -0.9
TRIM35-201ENST00000305364 PSMB8P28062 276 aa9.44□□□□□ -0.9
TRIM35-201ENST00000305364 DSCR8Q96T75 97 aa9.43□□□□□ -0.9
TRIM35-201ENST00000305364 GHRHP01286 108 aa9.43□□□□□ -0.9
TRIM35-201ENST00000305364 DEFB121Q5J5C9 76 aa9.43□□□□□ -0.9
TRIM35-201ENST00000305364 SMIM11BQ8TCY0 68 aa9.43□□□□□ -0.9
TRIM35-201ENST00000305364 F8P00451 2351 aa9.42□□□□□ -0.9
TRIM35-201ENST00000305364 C19orf84I3L1E1 186 aa9.42□□□□□ -0.9
TRIM35-201ENST00000305364 SOSTDC1Q6X4U4 206 aa9.42□□□□□ -0.9
TRIM35-201ENST00000305364 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
TRIM35-201ENST00000305364 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
TRIM35-201ENST00000305364 CLPSL2Q6UWE3 100 aa9.42□□□□□ -0.9
TRIM35-201ENST00000305364 RNF152Q8N8N0 203 aa9.42□□□□□ -0.9
TRIM35-201ENST00000305364 XCL1P47992 114 aa9.41□□□□□ -0.9
TRIM35-201ENST00000305364 Q6ZTI0 123 aa9.41□□□□□ -0.9
TRIM35-201ENST00000305364 FAM222AQ5U5X8 452 aa9.41□□□□□ -0.9
TRIM35-201ENST00000305364 C20orf197Q8N268 126 aa9.41□□□□□ -0.9
TRIM35-201ENST00000305364 TEP1Q99973 2627 aaKnown RBP9.4□□□□□ -0.9
TRIM35-201ENST00000305364 A0A087WYN8 130 aa9.4□□□□□ -0.9
TRIM35-201ENST00000305364 TMEM258P61165 79 aa9.4□□□□□ -0.9
TRIM35-201ENST00000305364 ATMQ13315 3056 aa9.4□□□□□ -0.9
TRIM35-201ENST00000305364 MAP6D1Q9H9H5 199 aa9.4□□□□□ -0.9
TRIM35-201ENST00000305364 ANKRD17O75179 2603 aaKnown RBP9.4□□□□□ -0.9
TRIM35-201ENST00000305364 DEFB130BP0DP73 79 aa9.39□□□□□ -0.91
TRIM35-201ENST00000305364 DEFB130AP0DP74 79 aa9.39□□□□□ -0.91
TRIM35-201ENST00000305364 WFDC9Q8NEX5 89 aa9.39□□□□□ -0.91
TRIM35-201ENST00000305364 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.39□□□□□ -0.91
TRIM35-201ENST00000305364 HELZ2Q9BYK8 2649 aaKnown RBP9.39□□□□□ -0.91
TRIM35-201ENST00000305364 AKAP13Q12802 2813 aa9.39□□□□□ -0.91
TRIM35-201ENST00000305364 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
TRIM35-201ENST00000305364 LINC00846Q9NV44 126 aa9.39□□□□□ -0.91
TRIM35-201ENST00000305364 SS18Q15532 418 aa9.38□□□□□ -0.91
TRIM35-201ENST00000305364 TRBV10-1A0A0K0K1A3 114 aa9.38□□□□□ -0.91
TRIM35-201ENST00000305364 TMEM89A2RUT3 159 aa9.37□□□□□ -0.91
TRIM35-201ENST00000305364 ENHOQ6UWT2 76 aa9.37□□□□□ -0.91
TRIM35-201ENST00000305364 Q6JHZ5 121 aa9.37□□□□□ -0.91
TRIM35-201ENST00000305364 LINC00337Q8N6G1 96 aa9.37□□□□□ -0.91
TRIM35-201ENST00000305364 CDC42SE2Q9NRR3 84 aa9.37□□□□□ -0.91
TRIM35-201ENST00000305364 SETXQ7Z333 2677 aaKnown RBP9.37□□□□□ -0.91
TRIM35-201ENST00000305364 IGLV5-39A0A0G2JS06 123 aa9.36□□□□□ -0.91
TRIM35-201ENST00000305364 AVPP01185 164 aa9.36□□□□□ -0.91
TRIM35-201ENST00000305364 CCL18P55774 89 aa9.36□□□□□ -0.91
TRIM35-201ENST00000305364 JMJD7-PLA2G4BH0Y9G9 81 aa9.36□□□□□ -0.91
TRIM35-201ENST00000305364 BRI3O95415 125 aa9.36□□□□□ -0.91
TRIM35-201ENST00000305364 CCL24O00175 119 aa9.36□□□□□ -0.91
TRIM35-201ENST00000305364 CRYGAP11844 174 aa9.36□□□□□ -0.91
TRIM35-201ENST00000305364 MUC3AQ02505 3323 aa9.35□□□□□ -0.91
TRIM35-201ENST00000305364 A0A096LPF7 62 aa9.35□□□□□ -0.91
TRIM35-201ENST00000305364 HRCT1Q6UXD1 115 aa9.35□□□□□ -0.91
TRIM35-201ENST00000305364 C18orf65Q6ZTR6 163 aa9.35□□□□□ -0.91
TRIM35-201ENST00000305364 KIR2DL5BQ8NHK3 375 aa9.35□□□□□ -0.91
TRIM35-201ENST00000305364 LINC01600Q96MT4 127 aa9.35□□□□□ -0.91
TRIM35-201ENST00000305364 SMG1Q96Q15 3661 aaKnown RBP9.35□□□□□ -0.91
TRIM35-201ENST00000305364 DPH3Q96FX2 82 aa9.34□□□□□ -0.91
TRIM35-201ENST00000305364 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
TRIM35-201ENST00000305364 MGAM2Q2M2H8 2515 aa9.33□□□□□ -0.92
TRIM35-201ENST00000305364 IBA57-AS1B1ANH7 110 aa9.33□□□□□ -0.92
TRIM35-201ENST00000305364 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
TRIM35-201ENST00000305364 LOC100131303A0A0U1RQF7 123 aa9.32□□□□□ -0.92
TRIM35-201ENST00000305364 TMEM256-PLSCR3K7ERE1 68 aa9.32□□□□□ -0.92
TRIM35-201ENST00000305364 RBM3P98179 157 aaKnown RBP9.32□□□□□ -0.92
TRIM35-201ENST00000305364 DMXL1Q9Y485 3027 aa9.31□□□□□ -0.92
TRIM35-201ENST00000305364 HILS1P60008 231 aa9.31□□□□□ -0.92
TRIM35-201ENST00000305364 IGLV10-54A0A075B6I4 117 aa9.3□□□□□ -0.92
TRIM35-201ENST00000305364 DEFB114Q30KQ6 69 aa9.3□□□□□ -0.92
TRIM35-201ENST00000305364 FAM236DA0A1B0GTK5 79 aa9.29□□□□□ -0.92
TRIM35-201ENST00000305364 FAM236CP0DP71 79 aa9.29□□□□□ -0.92
TRIM35-201ENST00000305364 C1orf43Q9BWL3 253 aa9.29□□□□□ -0.92
TRIM35-201ENST00000305364 ZNF843Q8N446 348 aa9.29□□□□□ -0.92
TRIM35-201ENST00000305364 CSMD1Q96PZ7 3565 aa9.29□□□□□ -0.92
TRIM35-201ENST00000305364 FAM104AQ969W3 186 aa9.29□□□□□ -0.92
TRIM35-201ENST00000305364 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
TRIM35-201ENST00000305364 BEAN1Q3B7T3 259 aa9.28□□□□□ -0.92
TRIM35-201ENST00000305364 FAM19A1Q7Z5A9 133 aa9.28□□□□□ -0.92
TRIM35-201ENST00000305364 F5H768 121 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms