RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
CDH8-201ENST00000299345 SMIM1B2RUZ4 78 aa9.68□□□□□ -0.86
CDH8-201ENST00000299345 CRLF1O75462 422 aa9.67□□□□□ -0.86
CDH8-201ENST00000299345 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
CDH8-201ENST00000299345 SPATA25Q9BR10 227 aa9.67□□□□□ -0.86
CDH8-201ENST00000299345 NTN5Q8WTR8 489 aaPredicted RBP9.67□□□□□ -0.86
CDH8-201ENST00000299345 OVOL2Q9BRP0 275 aa9.67□□□□□ -0.86
CDH8-201ENST00000299345 C19orf73Q9NVV2 129 aa9.67□□□□□ -0.86
CDH8-201ENST00000299345 UNC79Q9P2D8 2635 aa9.67□□□□□ -0.86
CDH8-201ENST00000299345 LINC00308Q8TCZ7 52 aa9.66□□□□□ -0.86
CDH8-201ENST00000299345 IGLV5-39A0A0G2JS06 123 aa9.66□□□□□ -0.86
CDH8-201ENST00000299345 HERV-K104P63124 156 aa9.66□□□□□ -0.86
CDH8-201ENST00000299345 HECTD1Q9ULT8 2610 aa9.66□□□□□ -0.86
CDH8-201ENST00000299345 TRBV6-8A0A0A6YYG3 113 aa9.65□□□□□ -0.86
CDH8-201ENST00000299345 PLAC8L1A1L4L8 177 aa9.65□□□□□ -0.86
CDH8-201ENST00000299345 CLEC2BQ92478 149 aa9.65□□□□□ -0.87
CDH8-201ENST00000299345 H7C423 109 aa9.64□□□□□ -0.87
CDH8-201ENST00000299345 SBSPONQ8IVN8 264 aa9.64□□□□□ -0.87
CDH8-201ENST00000299345 FHL2Q14192 279 aa9.64□□□□□ -0.87
CDH8-201ENST00000299345 CSNK1G2-AS1Q8NCQ2 148 aa9.64□□□□□ -0.87
CDH8-201ENST00000299345 TRBV10-2A0A0K0K1G8 114 aa9.64□□□□□ -0.87
CDH8-201ENST00000299345 GYPEP15421 78 aa9.64□□□□□ -0.87
CDH8-201ENST00000299345 LINC00158P58513 81 aa9.64□□□□□ -0.87
CDH8-201ENST00000299345 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
CDH8-201ENST00000299345 LY6G6DO95868 133 aa9.63□□□□□ -0.87
CDH8-201ENST00000299345 COX7B2Q8TF08 81 aa9.62□□□□□ -0.87
CDH8-201ENST00000299345 RNF183Q96D59 192 aa9.62□□□□□ -0.87
CDH8-201ENST00000299345 C5orf38Q86SI9 138 aa9.62□□□□□ -0.87
CDH8-201ENST00000299345 A0A096LPF7 62 aa9.62□□□□□ -0.87
CDH8-201ENST00000299345 SETXQ7Z333 2677 aaKnown RBP9.62□□□□□ -0.87
CDH8-201ENST00000299345 SCGB1A1P11684 91 aa9.61□□□□□ -0.87
CDH8-201ENST00000299345 LINC00482Q8N8I6 264 aa9.61□□□□□ -0.87
CDH8-201ENST00000299345 UBE2WQ96B02 151 aa9.61□□□□□ -0.87
CDH8-201ENST00000299345 IGLV4-60A0A075B6I1 120 aa9.61□□□□□ -0.87
CDH8-201ENST00000299345 C9orf66Q5T8R8 295 aa9.6□□□□□ -0.87
CDH8-201ENST00000299345 TENM4Q6N022 2769 aa9.6□□□□□ -0.87
CDH8-201ENST00000299345 C6orf226Q5I0X4 101 aa9.6□□□□□ -0.87
CDH8-201ENST00000299345 FAM19A3Q7Z5A8 133 aa9.59□□□□□ -0.87
CDH8-201ENST00000299345 C11orf68Q9H3H3 251 aaKnown RBP9.59□□□□□ -0.87
CDH8-201ENST00000299345 F5H768 121 aa9.59□□□□□ -0.87
CDH8-201ENST00000299345 CRPP02741 224 aa9.59□□□□□ -0.87
CDH8-201ENST00000299345 INAFM1C9JVW0 142 aa9.59□□□□□ -0.87
CDH8-201ENST00000299345 PAX4O43316 350 aa9.59□□□□□ -0.87
CDH8-201ENST00000299345 PRO0255Q9UI72 69 aa9.59□□□□□ -0.87
CDH8-201ENST00000299345 TRAV8-4A0A0B4J246 113 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 TEX49A0A1B0GTD5 131 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 PFN2P35080 140 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 SS18Q15532 418 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 MIR7-3HGQ8N6C7 128 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 KIR2DL5BQ8NHK3 375 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 H3BT86 120 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 DEFB4AO15263 64 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 XCL1P47992 114 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 LST1O00453 97 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 DEFB135Q30KP9 77 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 FAM222AQ5U5X8 452 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 CLPSL2Q6UWE3 100 aa9.58□□□□□ -0.88
CDH8-201ENST00000299345 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.88
CDH8-201ENST00000299345 CDIP1Q9H305 208 aa9.57□□□□□ -0.88
CDH8-201ENST00000299345 SMIM9A6NGZ8 99 aa9.57□□□□□ -0.88
CDH8-201ENST00000299345 KRTAP10-3P60369 221 aa9.57□□□□□ -0.88
CDH8-201ENST00000299345 M0QXV9 152 aa9.57□□□□□ -0.88
CDH8-201ENST00000299345 MT-ATP8P03928 68 aa9.57□□□□□ -0.88
CDH8-201ENST00000299345 HTN3P15516 51 aa9.56□□□□□ -0.88
CDH8-201ENST00000299345 A0A1B0GV72 72 aa9.56□□□□□ -0.88
CDH8-201ENST00000299345 SOSTDC1Q6X4U4 206 aa9.56□□□□□ -0.88
CDH8-201ENST00000299345 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
CDH8-201ENST00000299345 TRAV13-2A0A0B4J235 113 aa9.56□□□□□ -0.88
CDH8-201ENST00000299345 SNCGO76070 127 aa9.56□□□□□ -0.88
CDH8-201ENST00000299345 APOC4P55056 127 aa9.56□□□□□ -0.88
CDH8-201ENST00000299345 OR13C6PQ8NH95 151 aa9.56□□□□□ -0.88
CDH8-201ENST00000299345 XGP55808 180 aa9.55□□□□□ -0.88
CDH8-201ENST00000299345 DAD1P61803 113 aa9.55□□□□□ -0.88
CDH8-201ENST00000299345 COX7A2LO14548 114 aa9.55□□□□□ -0.88
CDH8-201ENST00000299345 LINC00959A0A1B0GUT2 108 aa9.54□□□□□ -0.88
CDH8-201ENST00000299345 CUBNO60494 3623 aa9.54□□□□□ -0.88
CDH8-201ENST00000299345 GCN1Q92616 2671 aaKnown RBP9.53□□□□□ -0.88
CDH8-201ENST00000299345 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
CDH8-201ENST00000299345 PDZD2O15018 2839 aa9.53□□□□□ -0.88
CDH8-201ENST00000299345 LYRM9A8MSI8 78 aa9.53□□□□□ -0.88
CDH8-201ENST00000299345 X6R8D5 127 aa9.53□□□□□ -0.88
CDH8-201ENST00000299345 A0A087WZ39 114 aa9.53□□□□□ -0.88
CDH8-201ENST00000299345 CKS1BP61024 79 aa9.53□□□□□ -0.88
CDH8-201ENST00000299345 ZNF469Q96JG9 3925 aaPredicted RBP9.53□□□□□ -0.88
CDH8-201ENST00000299345 NBEAL2Q6ZNJ1 2754 aa9.52□□□□□ -0.89
CDH8-201ENST00000299345 DNAL4O96015 105 aa9.52□□□□□ -0.89
CDH8-201ENST00000299345 CFAP161Q6P656 301 aa9.51□□□□□ -0.89
CDH8-201ENST00000299345 IBA57-AS1B1ANH7 110 aa9.51□□□□□ -0.89
CDH8-201ENST00000299345 ANGP03950 147 aaKnown RBP9.51□□□□□ -0.89
CDH8-201ENST00000299345 MALP21145 153 aa9.51□□□□□ -0.89
CDH8-201ENST00000299345 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
CDH8-201ENST00000299345 GAGE2EQ4V326 116 aa9.5□□□□□ -0.89
CDH8-201ENST00000299345 GAGE2DQ9UEU5 116 aa9.5□□□□□ -0.89
CDH8-201ENST00000299345 IGLV10-54A0A075B6I4 117 aa9.49□□□□□ -0.89
CDH8-201ENST00000299345 ATP5G1P05496 136 aa9.49□□□□□ -0.89
CDH8-201ENST00000299345 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
CDH8-201ENST00000299345 BAALC-AS2P0C853 105 aa9.49□□□□□ -0.89
CDH8-201ENST00000299345 LINC00269Q8N2A0 174 aa9.49□□□□□ -0.89
CDH8-201ENST00000299345 SHISA2Q6UWI4 295 aa9.48□□□□□ -0.89
CDH8-201ENST00000299345 CCL18P55774 89 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms