RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 HIST1H2BNQ99877 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 HIST1H2BMQ99879 126 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 CSDC2Q9Y534 153 aaKnown RBP3.9□□□□□ -1.79
SSX3-201ENST00000298396 BIRC6Q9NR09 4857 aa3.9□□□□□ -1.79
SSX3-201ENST00000298396 IGLV10-54A0A075B6I4 117 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 TRAV9-2A0A087WT02 112 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 K7EMI3 77 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 ZNF25P17030 456 aaPredicted RBP3.89□□□□□ -1.79
SSX3-201ENST00000298396 MRPS36P82909 103 aaKnown RBP3.89□□□□□ -1.79
SSX3-201ENST00000298396 Q0VG73 95 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 ORMDL2Q53FV1 153 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 PDZD11Q5EBL8 140 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 AMMECR1LQ6DCA0 310 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 FA2HQ7L5A8 372 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 ZNF664Q8N3J9 261 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 OR5A1Q8NGJ0 315 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 PRSS3P2Q8NHM4 247 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 SPANXA1Q9NS26 97 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 PYGO1Q9Y3Y4 419 aa3.89□□□□□ -1.79
SSX3-201ENST00000298396 IGKV2D-24A0A075B6R9 120 aa3.88□□□□□ -1.79
SSX3-201ENST00000298396 TRAV8-3A0A0A6YYJ7 113 aa3.88□□□□□ -1.79
SSX3-201ENST00000298396 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
SSX3-201ENST00000298396 LINC00959A0A1B0GUT2 108 aa3.88□□□□□ -1.79
SSX3-201ENST00000298396 SERF1AO75920 110 aa3.88□□□□□ -1.79
SSX3-201ENST00000298396 LINC00614P0C842 121 aa3.88□□□□□ -1.79
SSX3-201ENST00000298396 FUSP35637 526 aaKnown RBP eCLIP3.88□□□□□ -1.79
SSX3-201ENST00000298396 MIAQ16674 131 aa3.88□□□□□ -1.79
SSX3-201ENST00000298396 AMELXQ99217 191 aa3.88□□□□□ -1.79
SSX3-201ENST00000298396 CYSLTR1Q9Y271 337 aa3.88□□□□□ -1.79
SSX3-201ENST00000298396 HSPG2P98160 4391 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 A0A087WTM6 91 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 LECT2O14960 151 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 CRPP02741 224 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 NFE4Q86UQ8 179 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 FAM19A2Q8N3H0 131 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 CHCHD10Q8WYQ3 142 aaPredicted RBP3.87□□□□□ -1.79
SSX3-201ENST00000298396 TMEM18Q96B42 140 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 TMEM141Q96I45 108 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 TMEM101Q96IK0 257 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 TIMM17AQ99595 171 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 RYR1P21817 5038 aa3.87□□□□□ -1.79
SSX3-201ENST00000298396 VPS13BQ7Z7G8 4022 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 TRAV13-1A0A0B4J241 112 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 CCL25O15444 150 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 HBDP02042 147 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 UBE2D1P51668 147 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 COX6A2Q02221 97 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 LINC00336Q6ZUF6 198 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 ERASQ7Z444 233 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 BAGE3Q86Y29 109 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 C15orf56Q8N910 161 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 BAALCQ8WXS3 180 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 CHCHD1Q96BP2 118 aaKnown RBP3.86□□□□□ -1.79
SSX3-201ENST00000298396 SCGB3A1Q96QR1 104 aa3.86□□□□□ -1.79
SSX3-201ENST00000298396 KIAA1109Q2LD37 5005 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 TRAV8-4A0A0B4J246 113 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 IFITM10A6NMD0 228 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 USP17L23D6RBM5 183 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 PRYO14603 147 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 XCL1P47992 114 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 RAB5BP61020 215 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 COA6Q5JTJ3 125 aaKnown RBP3.85□□□□□ -1.79
SSX3-201ENST00000298396 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 DGAT2L7PQ6IED9 249 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 FAM19A3Q7Z5A8 133 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 RMI2Q96E14 147 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 TM2D2Q9BX73 214 aa3.85□□□□□ -1.79
SSX3-201ENST00000298396 IGLV4-69A0A075B6H9 119 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 IGHV3OR16-9A0A0B4J2B5 98 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 A0A0J9YXV3 536 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 C1orf196B1AJZ1 125 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 PSCAO43653 123 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 PRSS1P07477 247 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 SMAGPQ0VAQ4 97 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 CD164L2Q6UWJ8 174 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 TEX43Q6ZNM6 134 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 SPATA12Q7Z6I5 190 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 Q8N814 137 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 CST9LQ9H4G1 147 aa3.84□□□□□ -1.79
SSX3-201ENST00000298396 PKHD1L1Q86WI1 4243 aa3.84□□□□□ -1.8
SSX3-201ENST00000298396 LINC01549A6NIU2 74 aa3.83□□□□□ -1.8
SSX3-201ENST00000298396 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.83□□□□□ -1.8
SSX3-201ENST00000298396 HSBP1O75506 76 aa3.83□□□□□ -1.8
SSX3-201ENST00000298396 G0S2P27469 103 aa3.83□□□□□ -1.8
SSX3-201ENST00000298396 NDUFA6P56556 154 aa3.83□□□□□ -1.8
SSX3-201ENST00000298396 SS18Q15532 418 aa3.83□□□□□ -1.8
SSX3-201ENST00000298396 C5orf38Q86SI9 138 aa3.83□□□□□ -1.8
SSX3-201ENST00000298396 IFI27L1Q96BM0 104 aa3.83□□□□□ -1.8
SSX3-201ENST00000298396 LINC00526Q96FQ7 95 aa3.83□□□□□ -1.8
SSX3-201ENST00000298396 VCX2Q9H322 139 aa3.83□□□□□ -1.8
SSX3-201ENST00000298396 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.82□□□□□ -1.8
SSX3-201ENST00000298396 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
SSX3-201ENST00000298396 A0A087WZ39 114 aa3.82□□□□□ -1.8
SSX3-201ENST00000298396 GVQW2A0A096LPI5 108 aaPredicted RBP3.82□□□□□ -1.8
SSX3-201ENST00000298396 IGLC3P0DOY3 106 aa3.82□□□□□ -1.8
SSX3-201ENST00000298396 PMVKQ15126 192 aa3.82□□□□□ -1.8
SSX3-201ENST00000298396 HIGD2BQ4VC39 106 aa3.82□□□□□ -1.8
SSX3-201ENST00000298396 Q6ZN92 141 aa3.82□□□□□ -1.8
SSX3-201ENST00000298396 CDKN2A-AS1Q9UH64 79 aa3.82□□□□□ -1.8
SSX3-201ENST00000298396 IGHV3-64A0A075B6Q5 118 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms