RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.61
NCKIPSD-201ENST00000294129 C9JAW5 83 aa11.21□□□□□ -0.61
NCKIPSD-201ENST00000294129 CMC4P56277 68 aaPredicted RBP11.21□□□□□ -0.61
NCKIPSD-201ENST00000294129 CSNK1G2-AS1Q8NCQ2 148 aa11.21□□□□□ -0.61
NCKIPSD-201ENST00000294129 TMEM243Q9BU79 118 aa11.21□□□□□ -0.61
NCKIPSD-201ENST00000294129 A0A0B4J2C4 111 aa11.21□□□□□ -0.62
NCKIPSD-201ENST00000294129 HERVK_113P63121 156 aa11.2□□□□□ -0.62
NCKIPSD-201ENST00000294129 MIAQ16674 131 aa11.2□□□□□ -0.62
NCKIPSD-201ENST00000294129 CRLF1O75462 422 aa11.2□□□□□ -0.62
NCKIPSD-201ENST00000294129 SLC25A20O43772 301 aa11.19□□□□□ -0.62
NCKIPSD-201ENST00000294129 TIRAPP58753 221 aa11.19□□□□□ -0.62
NCKIPSD-201ENST00000294129 CDC42SE2Q9NRR3 84 aa11.19□□□□□ -0.62
NCKIPSD-201ENST00000294129 LINC00482Q8N8I6 264 aa11.19□□□□□ -0.62
NCKIPSD-201ENST00000294129 TRAV26-1A0A087WT03 109 aa11.19□□□□□ -0.62
NCKIPSD-201ENST00000294129 INAFM1C9JVW0 142 aa11.18□□□□□ -0.62
NCKIPSD-201ENST00000294129 TRIAP1O43715 76 aa11.18□□□□□ -0.62
NCKIPSD-201ENST00000294129 MEIG1Q5JSS6 88 aa11.18□□□□□ -0.62
NCKIPSD-201ENST00000294129 SBSPONQ8IVN8 264 aa11.18□□□□□ -0.62
NCKIPSD-201ENST00000294129 CHCHD5Q9BSY4 110 aa11.18□□□□□ -0.62
NCKIPSD-201ENST00000294129 HIVEP1P15822 2718 aa11.17□□□□□ -0.62
NCKIPSD-201ENST00000294129 A0A096LPF7 62 aa11.17□□□□□ -0.62
NCKIPSD-201ENST00000294129 SMIM1B2RUZ4 78 aa11.17□□□□□ -0.62
NCKIPSD-201ENST00000294129 DEFB4AO15263 64 aa11.17□□□□□ -0.62
NCKIPSD-201ENST00000294129 PRIMA1Q86XR5 153 aa11.17□□□□□ -0.62
NCKIPSD-201ENST00000294129 TOMM7Q9P0U1 55 aa11.17□□□□□ -0.62
NCKIPSD-201ENST00000294129 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
NCKIPSD-201ENST00000294129 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
NCKIPSD-201ENST00000294129 IGLV5-45A0A087WSX0 123 aa11.16□□□□□ -0.62
NCKIPSD-201ENST00000294129 TRRAPQ9Y4A5 3859 aa11.16□□□□□ -0.62
NCKIPSD-201ENST00000294129 NDUFA1O15239 70 aa11.16□□□□□ -0.62
NCKIPSD-201ENST00000294129 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
NCKIPSD-201ENST00000294129 FHL2Q14192 279 aa11.16□□□□□ -0.62
NCKIPSD-201ENST00000294129 IGLV4-60A0A075B6I1 120 aa11.15□□□□□ -0.62
NCKIPSD-201ENST00000294129 RPL13AP40429 203 aaKnown RBP11.15□□□□□ -0.62
NCKIPSD-201ENST00000294129 TEP1Q99973 2627 aaKnown RBP11.14□□□□□ -0.63
NCKIPSD-201ENST00000294129 TRBV6-4A0A1B0GX49 114 aa11.14□□□□□ -0.63
NCKIPSD-201ENST00000294129 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
NCKIPSD-201ENST00000294129 CLEC2BQ92478 149 aa11.14□□□□□ -0.63
NCKIPSD-201ENST00000294129 FAM110AQ9BQ89 295 aa11.14□□□□□ -0.63
NCKIPSD-201ENST00000294129 OVOL2Q9BRP0 275 aa11.14□□□□□ -0.63
NCKIPSD-201ENST00000294129 IGLV5-39A0A0G2JS06 123 aa11.13□□□□□ -0.63
NCKIPSD-201ENST00000294129 NTN5Q8WTR8 489 aaPredicted RBP11.13□□□□□ -0.63
NCKIPSD-201ENST00000294129 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
NCKIPSD-201ENST00000294129 CLPSL2Q6UWE3 100 aa11.12□□□□□ -0.63
NCKIPSD-201ENST00000294129 TMEM262E9PQX1 116 aa11.12□□□□□ -0.63
NCKIPSD-201ENST00000294129 LINC00308Q8TCZ7 52 aa11.12□□□□□ -0.63
NCKIPSD-201ENST00000294129 TRBV6-8A0A0A6YYG3 113 aa11.11□□□□□ -0.63
NCKIPSD-201ENST00000294129 F5H768 121 aa11.11□□□□□ -0.63
NCKIPSD-201ENST00000294129 GYPEP15421 78 aa11.11□□□□□ -0.63
NCKIPSD-201ENST00000294129 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
NCKIPSD-201ENST00000294129 C11orf68Q9H3H3 251 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-201ENST00000294129 DEFB135Q30KP9 77 aa11.11□□□□□ -0.63
NCKIPSD-201ENST00000294129 RNF183Q96D59 192 aa11.11□□□□□ -0.63
NCKIPSD-201ENST00000294129 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
NCKIPSD-201ENST00000294129 TEX49A0A1B0GTD5 131 aa11.1□□□□□ -0.63
NCKIPSD-201ENST00000294129 SOSTDC1Q6X4U4 206 aa11.1□□□□□ -0.63
NCKIPSD-201ENST00000294129 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
NCKIPSD-201ENST00000294129 FLNBO75369 2602 aaKnown RBP11.1□□□□□ -0.63
NCKIPSD-201ENST00000294129 TRBV30A0A0K0K1B3 111 aa11.09□□□□□ -0.63
NCKIPSD-201ENST00000294129 TIMM17BO60830 172 aa11.08□□□□□ -0.64
NCKIPSD-201ENST00000294129 COX6CP09669 75 aa11.08□□□□□ -0.64
NCKIPSD-201ENST00000294129 IFITM1P13164 125 aa11.08□□□□□ -0.64
NCKIPSD-201ENST00000294129 FAM222AQ5U5X8 452 aa11.07□□□□□ -0.64
NCKIPSD-201ENST00000294129 ANAPC13Q9BS18 74 aa11.07□□□□□ -0.64
NCKIPSD-201ENST00000294129 X6R8D5 127 aa11.07□□□□□ -0.64
NCKIPSD-201ENST00000294129 XCL1P47992 114 aa11.05□□□□□ -0.64
NCKIPSD-201ENST00000294129 COX7B2Q8TF08 81 aa11.05□□□□□ -0.64
NCKIPSD-201ENST00000294129 F8P00451 2351 aa11.05□□□□□ -0.64
NCKIPSD-201ENST00000294129 C2orf82Q6UX34 121 aa11.04□□□□□ -0.64
NCKIPSD-201ENST00000294129 FAM19A3Q7Z5A8 133 aa11.04□□□□□ -0.64
NCKIPSD-201ENST00000294129 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
NCKIPSD-201ENST00000294129 SNCGO76070 127 aa11.04□□□□□ -0.64
NCKIPSD-201ENST00000294129 PFN2P35080 140 aa11.04□□□□□ -0.64
NCKIPSD-201ENST00000294129 CITED1Q99966 193 aa11.04□□□□□ -0.64
NCKIPSD-201ENST00000294129 M0QXV9 152 aa11.03□□□□□ -0.64
NCKIPSD-201ENST00000294129 HTN3P15516 51 aa11.03□□□□□ -0.64
NCKIPSD-201ENST00000294129 LINC00158P58513 81 aa11.03□□□□□ -0.64
NCKIPSD-201ENST00000294129 MIR7-3HGQ8N6C7 128 aa11.03□□□□□ -0.64
NCKIPSD-201ENST00000294129 C9orf66Q5T8R8 295 aa11.03□□□□□ -0.64
NCKIPSD-201ENST00000294129 GAGE2BQ13066 116 aa11.02□□□□□ -0.64
NCKIPSD-201ENST00000294129 GAGE2EQ4V326 116 aa11.02□□□□□ -0.64
NCKIPSD-201ENST00000294129 KIR2DL5BQ8NHK3 375 aa11.02□□□□□ -0.64
NCKIPSD-201ENST00000294129 GAGE2DQ9UEU5 116 aa11.02□□□□□ -0.64
NCKIPSD-201ENST00000294129 H7C423 109 aa11.02□□□□□ -0.65
NCKIPSD-201ENST00000294129 PAX4O43316 350 aa11.02□□□□□ -0.65
NCKIPSD-201ENST00000294129 Q8N3U1 123 aa11.01□□□□□ -0.65
NCKIPSD-201ENST00000294129 TRAV8-4A0A0B4J246 113 aa11.01□□□□□ -0.65
NCKIPSD-201ENST00000294129 UBE2WQ96B02 151 aa11.01□□□□□ -0.65
NCKIPSD-201ENST00000294129 IGHV3OR16-9A0A0B4J2B5 98 aa11.01□□□□□ -0.65
NCKIPSD-201ENST00000294129 HERV-K104P63124 156 aa11.01□□□□□ -0.65
NCKIPSD-201ENST00000294129 PRO0255Q9UI72 69 aa11.01□□□□□ -0.65
NCKIPSD-201ENST00000294129 LINC00959A0A1B0GUT2 108 aa11□□□□□ -0.65
NCKIPSD-201ENST00000294129 IGLV10-54A0A075B6I4 117 aa10.99□□□□□ -0.65
NCKIPSD-201ENST00000294129 LST1O00453 97 aa10.99□□□□□ -0.65
NCKIPSD-201ENST00000294129 NHLRC4P0CG21 123 aaPredicted RBP10.99□□□□□ -0.65
NCKIPSD-201ENST00000294129 IGHV4-28A0A0C4DH34 117 aa10.98□□□□□ -0.65
NCKIPSD-201ENST00000294129 C15orf53Q8NAA6 179 aa10.98□□□□□ -0.65
NCKIPSD-201ENST00000294129 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
NCKIPSD-201ENST00000294129 CELA1Q9UNI1 258 aa10.98□□□□□ -0.65
NCKIPSD-201ENST00000294129 DAD1P61803 113 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms