RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 RPL39P62891 51 aaKnown RBP10.29□□□□□ -0.76
UBXN1-201ENST00000294119 MRPS36P82909 103 aaKnown RBP10.29□□□□□ -0.76
UBXN1-201ENST00000294119 GAGE6Q13070 117 aa10.29□□□□□ -0.76
UBXN1-201ENST00000294119 KRTAP3-3Q9BYR6 98 aa10.29□□□□□ -0.76
UBXN1-201ENST00000294119 KRTAP3-2Q9BYR7 98 aa10.29□□□□□ -0.76
UBXN1-201ENST00000294119 UBE2D4Q9Y2X8 147 aa10.29□□□□□ -0.76
UBXN1-201ENST00000294119 HNRNPA3P51991 378 aaKnown RBP10.28□□□□□ -0.76
UBXN1-201ENST00000294119 PMCHL1Q16048 86 aa10.28□□□□□ -0.76
UBXN1-201ENST00000294119 LINC01556Q5JQF7 62 aa10.28□□□□□ -0.76
UBXN1-201ENST00000294119 HIST3H2BBQ8N257 126 aa10.28□□□□□ -0.76
UBXN1-201ENST00000294119 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
UBXN1-201ENST00000294119 LPAP08519 4548 aa10.27□□□□□ -0.77
UBXN1-201ENST00000294119 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
UBXN1-201ENST00000294119 Q6ZN92 141 aa10.27□□□□□ -0.77
UBXN1-201ENST00000294119 MUC2Q02817 5179 aa10.27□□□□□ -0.77
UBXN1-201ENST00000294119 RBX1P62877 108 aa10.26□□□□□ -0.77
UBXN1-201ENST00000294119 ZNF664Q8N3J9 261 aa10.25□□□□□ -0.77
UBXN1-201ENST00000294119 IFI27L1Q96BM0 104 aa10.25□□□□□ -0.77
UBXN1-201ENST00000294119 CDC42SE2Q9NRR3 84 aa10.25□□□□□ -0.77
UBXN1-201ENST00000294119 FABP4P15090 132 aa10.24□□□□□ -0.77
UBXN1-201ENST00000294119 MPV17L2Q567V2 206 aa10.24□□□□□ -0.77
UBXN1-201ENST00000294119 HIST1H2BLQ99880 126 aa10.24□□□□□ -0.77
UBXN1-201ENST00000294119 MAP1LC3CQ9BXW4 147 aa10.24□□□□□ -0.77
UBXN1-201ENST00000294119 VCX2Q9H322 139 aa10.24□□□□□ -0.77
UBXN1-201ENST00000294119 IGLV4-3A0A075B6K6 122 aa10.23□□□□□ -0.77
UBXN1-201ENST00000294119 CCL25O15444 150 aa10.23□□□□□ -0.77
UBXN1-201ENST00000294119 ANGP03950 147 aaKnown RBP10.22□□□□□ -0.77
UBXN1-201ENST00000294119 PRSS1P07477 247 aa10.22□□□□□ -0.77
UBXN1-201ENST00000294119 TEX43Q6ZNM6 134 aa10.22□□□□□ -0.77
UBXN1-201ENST00000294119 C2orf88Q9BSF0 95 aa10.22□□□□□ -0.77
UBXN1-201ENST00000294119 CHAC1Q9BUX1 264 aa10.22□□□□□ -0.77
UBXN1-201ENST00000294119 IGLV4-60A0A075B6I1 120 aa10.21□□□□□ -0.77
UBXN1-201ENST00000294119 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.77
UBXN1-201ENST00000294119 IBA57-AS1B1ANH7 110 aa10.21□□□□□ -0.77
UBXN1-201ENST00000294119 PMVKQ15126 192 aa10.21□□□□□ -0.77
UBXN1-201ENST00000294119 Q8N976 141 aa10.21□□□□□ -0.77
UBXN1-201ENST00000294119 AMELXQ99217 191 aa10.21□□□□□ -0.77
UBXN1-201ENST00000294119 IGHV3-30P01768 117 aa10.2□□□□□ -0.78
UBXN1-201ENST00000294119 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
UBXN1-201ENST00000294119 IGHV3-30-3P0DP02 117 aa10.2□□□□□ -0.78
UBXN1-201ENST00000294119 IGHV3-30-5P0DP03 117 aa10.2□□□□□ -0.78
UBXN1-201ENST00000294119 AKR1D1P51857 326 aa10.2□□□□□ -0.78
UBXN1-201ENST00000294119 CIRBP-AS1Q8TBR5 109 aa10.2□□□□□ -0.78
UBXN1-201ENST00000294119 BAALCQ8WXS3 180 aa10.2□□□□□ -0.78
UBXN1-201ENST00000294119 PSCAO43653 123 aa10.19□□□□□ -0.78
UBXN1-201ENST00000294119 SEC11AP67812 179 aa10.19□□□□□ -0.78
UBXN1-201ENST00000294119 PET117Q6UWS5 81 aa10.19□□□□□ -0.78
UBXN1-201ENST00000294119 Q6ZUT4 128 aa10.19□□□□□ -0.78
UBXN1-201ENST00000294119 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
UBXN1-201ENST00000294119 PRR34Q9NV39 138 aa10.19□□□□□ -0.78
UBXN1-201ENST00000294119 TRAV8-3A0A0A6YYJ7 113 aa10.18□□□□□ -0.78
UBXN1-201ENST00000294119 TRAV8-4A0A0B4J246 113 aa10.18□□□□□ -0.78
UBXN1-201ENST00000294119 CRPP02741 224 aa10.18□□□□□ -0.78
UBXN1-201ENST00000294119 REG3AQ06141 175 aa10.18□□□□□ -0.78
UBXN1-201ENST00000294119 WFDC2Q14508 124 aa10.18□□□□□ -0.78
UBXN1-201ENST00000294119 LINC00173Q6ZV60 143 aa10.18□□□□□ -0.78
UBXN1-201ENST00000294119 LINC00269Q8N2A0 174 aa10.18□□□□□ -0.78
UBXN1-201ENST00000294119 FAM104AQ969W3 186 aa10.18□□□□□ -0.78
UBXN1-201ENST00000294119 OPRPNQ99935 248 aaPredicted RBP10.18□□□□□ -0.78
UBXN1-201ENST00000294119 KLK12Q9UKR0 248 aa10.18□□□□□ -0.78
UBXN1-201ENST00000294119 IFITM10A6NMD0 228 aa10.17□□□□□ -0.78
UBXN1-201ENST00000294119 SYS1-DBNDD2H3BUS1 97 aa10.17□□□□□ -0.78
UBXN1-201ENST00000294119 SS18Q15532 418 aa10.17□□□□□ -0.78
UBXN1-201ENST00000294119 MIAQ16674 131 aa10.17□□□□□ -0.78
UBXN1-201ENST00000294119 C20orf202A1L168 122 aa10.16□□□□□ -0.78
UBXN1-201ENST00000294119 C3orf79P0CE67 100 aa10.16□□□□□ -0.78
UBXN1-201ENST00000294119 KRTDAPP60985 99 aa10.16□□□□□ -0.78
UBXN1-201ENST00000294119 FAM19A3Q7Z5A8 133 aa10.16□□□□□ -0.78
UBXN1-201ENST00000294119 RMI2Q96E14 147 aa10.16□□□□□ -0.78
UBXN1-201ENST00000294119 TM2D2Q9BX73 214 aa10.16□□□□□ -0.78
UBXN1-201ENST00000294119 LINC00959A0A1B0GUT2 108 aa10.15□□□□□ -0.78
UBXN1-201ENST00000294119 OR10D4PQ8NGN7 298 aa10.15□□□□□ -0.78
UBXN1-201ENST00000294119 COX11Q9Y6N1 276 aa10.15□□□□□ -0.78
UBXN1-201ENST00000294119 UBE2D1P51668 147 aa10.14□□□□□ -0.79
UBXN1-201ENST00000294119 RPL37AP61513 92 aaKnown RBP10.14□□□□□ -0.79
UBXN1-201ENST00000294119 RNASE13Q5GAN3 156 aaKnown RBP10.14□□□□□ -0.79
UBXN1-201ENST00000294119 Q8N3U1 123 aa10.14□□□□□ -0.79
UBXN1-201ENST00000294119 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
UBXN1-201ENST00000294119 CHTOPQ9Y3Y2 248 aaKnown RBP10.14□□□□□ -0.79
UBXN1-201ENST00000294119 TRAV13-1A0A0B4J241 112 aa10.13□□□□□ -0.79
UBXN1-201ENST00000294119 TINCRA0A1B0GVN0 87 aa10.13□□□□□ -0.79
UBXN1-201ENST00000294119 F8VRH5 84 aa10.13□□□□□ -0.79
UBXN1-201ENST00000294119 ODF1Q14990 250 aa10.13□□□□□ -0.79
UBXN1-201ENST00000294119 LINC01620Q4KN68 170 aa10.13□□□□□ -0.79
UBXN1-201ENST00000294119 LINC01545Q5VT33 79 aa10.13□□□□□ -0.79
UBXN1-201ENST00000294119 ENHOQ6UWT2 76 aa10.13□□□□□ -0.79
UBXN1-201ENST00000294119 Q6ZRU5 148 aa10.13□□□□□ -0.79
UBXN1-201ENST00000294119 H0Y8G0 127 aa10.12□□□□□ -0.79
UBXN1-201ENST00000294119 PLNP26678 52 aa10.12□□□□□ -0.79
UBXN1-201ENST00000294119 HERVK_113P63121 156 aa10.12□□□□□ -0.79
UBXN1-201ENST00000294119 Q9HAA7 133 aa10.12□□□□□ -0.79
UBXN1-201ENST00000294119 IGKV3OR2-268A0A0C4DH90 116 aa10.11□□□□□ -0.79
UBXN1-201ENST00000294119 IGLC3P0DOY3 106 aa10.11□□□□□ -0.79
UBXN1-201ENST00000294119 ZC2HC1BQ5TFG8 222 aa10.11□□□□□ -0.79
UBXN1-201ENST00000294119 C1orf43Q9BWL3 253 aa10.11□□□□□ -0.79
UBXN1-201ENST00000294119 GEMIN7Q9H840 131 aaKnown RBP10.11□□□□□ -0.79
UBXN1-201ENST00000294119 DPM2O94777 84 aa10.1□□□□□ -0.79
UBXN1-201ENST00000294119 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
UBXN1-201ENST00000294119 CLPSL2Q6UWE3 100 aa10.1□□□□□ -0.79
UBXN1-201ENST00000294119 CD164L2Q6UWJ8 174 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms