RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 TMEM243Q9BU79 118 aa12.2□□□□□ -0.46
CCDC78-201ENST00000293889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-201ENST00000293889 IGKV2-29A2NJV5 120 aaPredicted RBP12.19□□□□□ -0.46
CCDC78-201ENST00000293889 C11orf86A6NJI1 115 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 C20orf203Q8NBC4 194 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 NAA38Q9BRA0 125 aaKnown RBP12.19□□□□□ -0.46
CCDC78-201ENST00000293889 LINC00588Q9Y4M8 146 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 CCL18P55774 89 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
CCDC78-201ENST00000293889 K7ERJ3 54 aa12.18□□□□□ -0.46
CCDC78-201ENST00000293889 HERVK_113P61574 105 aa12.18□□□□□ -0.46
CCDC78-201ENST00000293889 RPL39P62891 51 aaKnown RBP12.18□□□□□ -0.46
CCDC78-201ENST00000293889 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
CCDC78-201ENST00000293889 LYSTQ99698 3801 aa12.17□□□□□ -0.46
CCDC78-201ENST00000293889 GAGE6Q13070 117 aa12.16□□□□□ -0.46
CCDC78-201ENST00000293889 RNF151Q2KHN1 245 aa12.16□□□□□ -0.46
CCDC78-201ENST00000293889 SPANXB1Q9NS25 103 aaPredicted RBP12.16□□□□□ -0.46
CCDC78-201ENST00000293889 KMT2CQ8NEZ4 4911 aaKnown RBP12.16□□□□□ -0.46
CCDC78-201ENST00000293889 UBE2L6O14933 153 aa12.15□□□□□ -0.46
CCDC78-201ENST00000293889 ZNF815PA8K554 130 aa12.15□□□□□ -0.47
CCDC78-201ENST00000293889 F8W1H4 67 aa12.15□□□□□ -0.47
CCDC78-201ENST00000293889 WFDC10BQ8IUB3 73 aa12.15□□□□□ -0.47
CCDC78-201ENST00000293889 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 A6NJY4 79 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 H7C423 109 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 UBE2D1P51668 147 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 VPS25Q9BRG1 176 aa12.14□□□□□ -0.47
CCDC78-201ENST00000293889 TMEM262E9PQX1 116 aa12.13□□□□□ -0.47
CCDC78-201ENST00000293889 UBE2DNLQ8IWF7 75 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 Q8N3U1 123 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 UPK3BQ9BT76 320 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 ALMS1Q8TCU4 4167 aa12.12□□□□□ -0.47
CCDC78-201ENST00000293889 PLEKHB2Q96CS7 222 aa12.11□□□□□ -0.47
CCDC78-201ENST00000293889 PYGO1Q9Y3Y4 419 aa12.11□□□□□ -0.47
CCDC78-201ENST00000293889 AMELXQ99217 191 aa12.11□□□□□ -0.47
CCDC78-201ENST00000293889 DNAH1Q9P2D7 4330 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 LCE6AA0A183 80 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 LINC00476Q8WZB0 136 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 TIMM21Q9BVV7 248 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 VPS13DQ5THJ4 4388 aa12.1□□□□□ -0.47
CCDC78-201ENST00000293889 OPRPNQ99935 248 aaPredicted RBP12.09□□□□□ -0.47
CCDC78-201ENST00000293889 SACSQ9NZJ4 4579 aa12.09□□□□□ -0.47
CCDC78-201ENST00000293889 IGLV4-60A0A075B6I1 120 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 A0A1B0GUV1 79 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 LEPROTO15243 131 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 DGAT2L7PQ6IED9 249 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 SCGB1D4Q6XE38 83 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 PRO0461Q9UI25 63 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
CCDC78-201ENST00000293889 TMEM223A0PJW6 202 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 IGHV3-30P01768 117 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 IGHV3-33P01772 117 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 IGHV3-30-3P0DP02 117 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 IGHV3-30-5P0DP03 117 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 SMAGPQ0VAQ4 97 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 TMEM101Q96IK0 257 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 Q9H8V8 135 aa12.08□□□□□ -0.48
CCDC78-201ENST00000293889 LY6G6CO95867 125 aa12.07□□□□□ -0.48
CCDC78-201ENST00000293889 DNAH10OSP0CZ25 163 aa12.07□□□□□ -0.48
CCDC78-201ENST00000293889 LINC01556Q5JQF7 62 aa12.07□□□□□ -0.48
CCDC78-201ENST00000293889 IGLV4-3A0A075B6K6 122 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 J3QQQ9 107 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 TSPEAR-AS2P59090 65 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 Q6ZUT4 128 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 CDC42SE2Q9NRR3 84 aa12.06□□□□□ -0.48
CCDC78-201ENST00000293889 SRSF9Q13242 221 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC78-201ENST00000293889 RNASE13Q5GAN3 156 aaKnown RBP12.05□□□□□ -0.48
CCDC78-201ENST00000293889 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
CCDC78-201ENST00000293889 TMEM170BQ5T4T1 132 aa12.04□□□□□ -0.48
CCDC78-201ENST00000293889 ANGP03950 147 aaKnown RBP12.04□□□□□ -0.48
CCDC78-201ENST00000293889 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
CCDC78-201ENST00000293889 PGPEP1Q9NXJ5 209 aa12.04□□□□□ -0.48
CCDC78-201ENST00000293889 KLK12Q9UKR0 248 aa12.03□□□□□ -0.48
CCDC78-201ENST00000293889 HYDINQ4G0P3 5121 aa12.02□□□□□ -0.48
CCDC78-201ENST00000293889 LGALS3P17931 250 aaKnown RBP12.02□□□□□ -0.49
CCDC78-201ENST00000293889 LYRM7Q5U5X0 104 aa12.02□□□□□ -0.49
CCDC78-201ENST00000293889 LINC00269Q8N2A0 174 aa12.02□□□□□ -0.49
CCDC78-201ENST00000293889 VCX2Q9H322 139 aa12.02□□□□□ -0.49
CCDC78-201ENST00000293889 H3BMG7 143 aa12.01□□□□□ -0.49
CCDC78-201ENST00000293889 TSPAN13O95857 204 aa12.01□□□□□ -0.49
CCDC78-201ENST00000293889 WFDC2Q14508 124 aa12.01□□□□□ -0.49
CCDC78-201ENST00000293889 C21orf62-AS1Q17RA5 79 aa12□□□□□ -0.49
CCDC78-201ENST00000293889 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
CCDC78-201ENST00000293889 KMT2AQ03164 3969 aa12□□□□□ -0.49
CCDC78-201ENST00000293889 J3QR89 54 aa12□□□□□ -0.49
CCDC78-201ENST00000293889 RPL24P83731 157 aaKnown RBP12□□□□□ -0.49
CCDC78-201ENST00000293889 IGKV3OR2-268A0A0C4DH90 116 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 CFC1BP0CG36 223 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 CFC1P0CG37 223 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 REG3AQ06141 175 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 PRR34Q9NV39 138 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 RYR2Q92736 4967 aa11.98□□□□□ -0.49
CCDC78-201ENST00000293889 RYR3Q15413 4870 aa11.97□□□□□ -0.49
CCDC78-201ENST00000293889 TRBV20-1A0A075B6N2 111 aa11.97□□□□□ -0.49
CCDC78-201ENST00000293889 ENHOQ6UWT2 76 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms