RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 UBE2D1P51668 147 aa7.98□□□□□ -1.13
PKNOX1-201ENST00000291547 PIEZO2Q9H5I5 2752 aa7.98□□□□□ -1.13
PKNOX1-201ENST00000291547 LOC107984640A0A0U1RRK4 108 aa7.98□□□□□ -1.13
PKNOX1-201ENST00000291547 SPINK6Q6UWN8 80 aa7.98□□□□□ -1.13
PKNOX1-201ENST00000291547 TRBV6-8A0A0A6YYG3 113 aa7.98□□□□□ -1.13
PKNOX1-201ENST00000291547 CRYGDP07320 174 aa7.98□□□□□ -1.13
PKNOX1-201ENST00000291547 EIF4EBP1Q13541 118 aaPredicted RBP7.97□□□□□ -1.13
PKNOX1-201ENST00000291547 SYCNQ0VAF6 134 aa7.97□□□□□ -1.13
PKNOX1-201ENST00000291547 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
PKNOX1-201ENST00000291547 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
PKNOX1-201ENST00000291547 PROK1P58294 105 aa7.97□□□□□ -1.13
PKNOX1-201ENST00000291547 C9orf85Q96MD7 179 aa7.97□□□□□ -1.13
PKNOX1-201ENST00000291547 LYRM9A8MSI8 78 aa7.96□□□□□ -1.13
PKNOX1-201ENST00000291547 CRYGAP11844 174 aa7.96□□□□□ -1.14
PKNOX1-201ENST00000291547 PYGO1Q9Y3Y4 419 aa7.96□□□□□ -1.14
PKNOX1-201ENST00000291547 NAV2Q8IVL1 2488 aa7.96□□□□□ -1.14
PKNOX1-201ENST00000291547 SPTBN4Q9H254 2564 aa7.95□□□□□ -1.14
PKNOX1-201ENST00000291547 TLN1Q9Y490 2541 aaKnown RBP7.95□□□□□ -1.14
PKNOX1-201ENST00000291547 MIFP14174 115 aa7.95□□□□□ -1.14
PKNOX1-201ENST00000291547 PMAIP1Q13794 54 aa7.95□□□□□ -1.14
PKNOX1-201ENST00000291547 DAZAP2Q15038 168 aaPredicted RBP7.95□□□□□ -1.14
PKNOX1-201ENST00000291547 Q6ZS46 218 aa7.95□□□□□ -1.14
PKNOX1-201ENST00000291547 POM121L12Q8N7R1 296 aa7.95□□□□□ -1.14
PKNOX1-201ENST00000291547 SBSPONQ8IVN8 264 aa7.95□□□□□ -1.14
PKNOX1-201ENST00000291547 SMIM11BQ8TCY0 68 aa7.95□□□□□ -1.14
PKNOX1-201ENST00000291547 DEFB114Q30KQ6 69 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 SOSTDC1Q6X4U4 206 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 Q6JHZ5 121 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 LINC00574Q9H8X3 128 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 EXPH5Q8NEV8 1989 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 LY6LH3BQJ8 138 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 TNFRSF13BO14836 293 aaPredicted RBP7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 IGHV4-30-4P0DP06 118 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 IGHV4-31P0DP07 118 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 TRBV6-4A0A1B0GX49 114 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 ODF3BA8MYP8 253 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 C22orf34Q6ZV56 151 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 FAM30AQ9NZY2 134 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 CELA1Q9UNI1 258 aa7.94□□□□□ -1.14
PKNOX1-201ENST00000291547 DEFB131BA0A096LNP1 70 aa7.93□□□□□ -1.14
PKNOX1-201ENST00000291547 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
PKNOX1-201ENST00000291547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.93□□□□□ -1.14
PKNOX1-201ENST00000291547 NRACQ8N912 160 aa7.93□□□□□ -1.14
PKNOX1-201ENST00000291547 DNAJC9-AS1A6NH13 148 aa7.92□□□□□ -1.14
PKNOX1-201ENST00000291547 TSHBP01222 138 aa7.92□□□□□ -1.14
PKNOX1-201ENST00000291547 ANKRD11Q6UB99 2663 aaPredicted RBP7.92□□□□□ -1.14
PKNOX1-201ENST00000291547 LMO4P61968 165 aa7.92□□□□□ -1.14
PKNOX1-201ENST00000291547 DHRS4-AS1Q9P1J3 65 aa7.92□□□□□ -1.14
PKNOX1-201ENST00000291547 M0R378 163 aa7.92□□□□□ -1.14
PKNOX1-201ENST00000291547 SMCPP49901 116 aaPredicted RBP7.92□□□□□ -1.14
PKNOX1-201ENST00000291547 EBI3Q14213 229 aa7.92□□□□□ -1.14
PKNOX1-201ENST00000291547 CD164L2Q6UWJ8 174 aa7.91□□□□□ -1.14
PKNOX1-201ENST00000291547 IGLV2-11P01706 119 aa7.91□□□□□ -1.14
PKNOX1-201ENST00000291547 TRAV7A0A075B6U4 112 aa7.9□□□□□ -1.14
PKNOX1-201ENST00000291547 NTM-AS1Q6ZSK4 140 aa7.9□□□□□ -1.14
PKNOX1-201ENST00000291547 NHLRC4P0CG21 123 aaPredicted RBP7.9□□□□□ -1.14
PKNOX1-201ENST00000291547 BBC3Q96PG8 261 aaPredicted RBP7.9□□□□□ -1.14
PKNOX1-201ENST00000291547 A0A087WVE0 104 aa7.9□□□□□ -1.15
PKNOX1-201ENST00000291547 RNASE3P12724 160 aaKnown RBP7.9□□□□□ -1.15
PKNOX1-201ENST00000291547 ZNF73O43830 326 aaPredicted RBP7.89□□□□□ -1.15
PKNOX1-201ENST00000291547 POLR2KP53803 58 aaKnown RBP7.89□□□□□ -1.15
PKNOX1-201ENST00000291547 A0A096LNJ9 63 aa7.89□□□□□ -1.15
PKNOX1-201ENST00000291547 ZNF843Q8N446 348 aa7.89□□□□□ -1.15
PKNOX1-201ENST00000291547 GAS8-AS1O95177 125 aa7.89□□□□□ -1.15
PKNOX1-201ENST00000291547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.89□□□□□ -1.15
PKNOX1-201ENST00000291547 IL17DQ8TAD2 202 aa7.89□□□□□ -1.15
PKNOX1-201ENST00000291547 LINC00208Q96KT6 92 aa7.89□□□□□ -1.15
PKNOX1-201ENST00000291547 NANOS2P60321 138 aaKnown RBP7.88□□□□□ -1.15
PKNOX1-201ENST00000291547 C11orf21Q9P2W6 132 aa7.88□□□□□ -1.15
PKNOX1-201ENST00000291547 UBE2D4Q9Y2X8 147 aa7.88□□□□□ -1.15
PKNOX1-201ENST00000291547 PTPRBP23467 1997 aa7.88□□□□□ -1.15
PKNOX1-201ENST00000291547 ARHGAP32A7KAX9 2087 aa7.88□□□□□ -1.15
PKNOX1-201ENST00000291547 LINC00959A0A1B0GUT2 108 aa7.88□□□□□ -1.15
PKNOX1-201ENST00000291547 C19orf84I3L1E1 186 aa7.88□□□□□ -1.15
PKNOX1-201ENST00000291547 LINC00482Q8N8I6 264 aa7.88□□□□□ -1.15
PKNOX1-201ENST00000291547 CDH23Q9H251 3354 aa7.87□□□□□ -1.15
PKNOX1-201ENST00000291547 WFDC10AQ9H1F0 79 aa7.87□□□□□ -1.15
PKNOX1-201ENST00000291547 F8P00451 2351 aa7.87□□□□□ -1.15
PKNOX1-201ENST00000291547 RPL37AP8A6NKH3 93 aa7.87□□□□□ -1.15
PKNOX1-201ENST00000291547 PRUNE2Q8WUY3 3088 aa7.87□□□□□ -1.15
PKNOX1-201ENST00000291547 HILS1P60008 231 aa7.86□□□□□ -1.15
PKNOX1-201ENST00000291547 PRR9Q5T870 116 aa7.86□□□□□ -1.15
PKNOX1-201ENST00000291547 MUC4Q99102 2169 aa7.86□□□□□ -1.15
PKNOX1-201ENST00000291547 CHD8Q9HCK8 2581 aa7.86□□□□□ -1.15
PKNOX1-201ENST00000291547 IGLV4-69A0A075B6H9 119 aa7.86□□□□□ -1.15
PKNOX1-201ENST00000291547 LINC01546A6NGU7 62 aa7.86□□□□□ -1.15
PKNOX1-201ENST00000291547 LOC100131303A0A0U1RQF7 123 aa7.86□□□□□ -1.15
PKNOX1-201ENST00000291547 FSTL3O95633 263 aa7.86□□□□□ -1.15
PKNOX1-201ENST00000291547 C7orf33Q8WU49 177 aa7.85□□□□□ -1.15
PKNOX1-201ENST00000291547 CPAMD8Q8IZJ3 1885 aa7.85□□□□□ -1.15
PKNOX1-201ENST00000291547 C10orf99Q6UWK7 81 aa7.85□□□□□ -1.15
PKNOX1-201ENST00000291547 TLN2Q9Y4G6 2542 aa7.85□□□□□ -1.15
PKNOX1-201ENST00000291547 IGLV9-49A0A0B4J1Y8 123 aa7.85□□□□□ -1.15
PKNOX1-201ENST00000291547 Q6YL49 198 aa7.85□□□□□ -1.15
PKNOX1-201ENST00000291547 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
PKNOX1-201ENST00000291547 RETNQ9HD89 108 aa7.84□□□□□ -1.15
PKNOX1-201ENST00000291547 CRIP2P52943 208 aaPredicted RBP7.84□□□□□ -1.15
PKNOX1-201ENST00000291547 BPTFQ12830 3046 aa7.84□□□□□ -1.15
PKNOX1-201ENST00000291547 PSPHP1O15172 72 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms