RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 DEFB4AO15263 64 aa11.64□□□□□ -0.55
CACNA2D3-201ENST00000288197 PF4P02776 101 aa11.64□□□□□ -0.55
CACNA2D3-201ENST00000288197 CELSR2Q9HCU4 2923 aa11.63□□□□□ -0.55
CACNA2D3-201ENST00000288197 ITPR3Q14573 2671 aa11.63□□□□□ -0.55
CACNA2D3-201ENST00000288197 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
CACNA2D3-201ENST00000288197 TMEM86BQ8N661 226 aa11.63□□□□□ -0.55
CACNA2D3-201ENST00000288197 NDUFA1O15239 70 aa11.62□□□□□ -0.55
CACNA2D3-201ENST00000288197 INAFM2P0DMQ5 153 aa11.62□□□□□ -0.55
CACNA2D3-201ENST00000288197 DEFB114Q30KQ6 69 aa11.62□□□□□ -0.55
CACNA2D3-201ENST00000288197 ZNF702PQ9H963 129 aa11.62□□□□□ -0.55
CACNA2D3-201ENST00000288197 SPANXDQ9BXN6 97 aa11.62□□□□□ -0.55
CACNA2D3-201ENST00000288197 SPANXCQ9NY87 97 aa11.62□□□□□ -0.55
CACNA2D3-201ENST00000288197 TRAV13-2A0A0B4J235 113 aa11.62□□□□□ -0.55
CACNA2D3-201ENST00000288197 COX7B2Q8TF08 81 aa11.62□□□□□ -0.55
CACNA2D3-201ENST00000288197 DNAJC30Q96LL9 226 aa11.61□□□□□ -0.55
CACNA2D3-201ENST00000288197 IGSF10Q6WRI0 2623 aa11.61□□□□□ -0.55
CACNA2D3-201ENST00000288197 TMEM89A2RUT3 159 aa11.61□□□□□ -0.55
CACNA2D3-201ENST00000288197 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.61□□□□□ -0.55
CACNA2D3-201ENST00000288197 S100A7L2Q5SY68 101 aa11.6□□□□□ -0.55
CACNA2D3-201ENST00000288197 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
CACNA2D3-201ENST00000288197 F8P00451 2351 aa11.59□□□□□ -0.55
CACNA2D3-201ENST00000288197 NCR3O14931 201 aa11.59□□□□□ -0.55
CACNA2D3-201ENST00000288197 HECTD1Q9ULT8 2610 aa11.59□□□□□ -0.55
CACNA2D3-201ENST00000288197 WFDC11Q8NEX6 87 aa11.58□□□□□ -0.55
CACNA2D3-201ENST00000288197 LAMTOR3Q9UHA4 124 aa11.58□□□□□ -0.56
CACNA2D3-201ENST00000288197 SMIM1B2RUZ4 78 aa11.58□□□□□ -0.56
CACNA2D3-201ENST00000288197 KRTAP10-9P60411 292 aa11.57□□□□□ -0.56
CACNA2D3-201ENST00000288197 HIST2H2BCQ6DN03 193 aa11.57□□□□□ -0.56
CACNA2D3-201ENST00000288197 TIRAPP58753 221 aa11.57□□□□□ -0.56
CACNA2D3-201ENST00000288197 A0A1B0GX51 115 aa11.56□□□□□ -0.56
CACNA2D3-201ENST00000288197 ODF3L2Q3SX64 289 aa11.56□□□□□ -0.56
CACNA2D3-201ENST00000288197 SBSPONQ8IVN8 264 aa11.56□□□□□ -0.56
CACNA2D3-201ENST00000288197 CITED1Q99966 193 aa11.56□□□□□ -0.56
CACNA2D3-201ENST00000288197 LITAFQ99732 161 aa11.56□□□□□ -0.56
CACNA2D3-201ENST00000288197 KLK5Q9Y337 293 aaPredicted RBP11.56□□□□□ -0.56
CACNA2D3-201ENST00000288197 J3QLI3 93 aa11.56□□□□□ -0.56
CACNA2D3-201ENST00000288197 Q6YL49 198 aa11.55□□□□□ -0.56
CACNA2D3-201ENST00000288197 ANGP03950 147 aaKnown RBP11.55□□□□□ -0.56
CACNA2D3-201ENST00000288197 GYPEP15421 78 aa11.55□□□□□ -0.56
CACNA2D3-201ENST00000288197 SOSTDC1Q6X4U4 206 aa11.55□□□□□ -0.56
CACNA2D3-201ENST00000288197 SS18Q15532 418 aa11.55□□□□□ -0.56
CACNA2D3-201ENST00000288197 BSNQ9UPA5 3926 aa11.54□□□□□ -0.56
CACNA2D3-201ENST00000288197 PRR3P79522 188 aaKnown RBP11.54□□□□□ -0.56
CACNA2D3-201ENST00000288197 LINC00643Q86TS7 51 aa11.54□□□□□ -0.56
CACNA2D3-201ENST00000288197 MXRA5Q9NR99 2828 aa11.54□□□□□ -0.56
CACNA2D3-201ENST00000288197 LINC00526Q96FQ7 95 aa11.53□□□□□ -0.56
CACNA2D3-201ENST00000288197 NHLRC4P0CG21 123 aaPredicted RBP11.53□□□□□ -0.56
CACNA2D3-201ENST00000288197 IGHV4-31P0DP07 118 aa11.53□□□□□ -0.56
CACNA2D3-201ENST00000288197 A0A087WVE0 104 aa11.53□□□□□ -0.56
CACNA2D3-201ENST00000288197 C1orf158Q8N1D5 194 aa11.53□□□□□ -0.56
CACNA2D3-201ENST00000288197 HAMPP81172 84 aa11.52□□□□□ -0.56
CACNA2D3-201ENST00000288197 CDC42SE2Q9NRR3 84 aa11.52□□□□□ -0.56
CACNA2D3-201ENST00000288197 ACYP1P07311 99 aa11.52□□□□□ -0.57
CACNA2D3-201ENST00000288197 SMIM11BQ8TCY0 68 aa11.52□□□□□ -0.57
CACNA2D3-201ENST00000288197 C4orf3Q8WVX3 66 aa11.52□□□□□ -0.57
CACNA2D3-201ENST00000288197 IGLV4-60A0A075B6I1 120 aa11.51□□□□□ -0.57
CACNA2D3-201ENST00000288197 WFDC9Q8NEX5 89 aa11.51□□□□□ -0.57
CACNA2D3-201ENST00000288197 FAM218AQ96MZ4 157 aa11.51□□□□□ -0.57
CACNA2D3-201ENST00000288197 hADV29S1A0JD25 119 aa11.5□□□□□ -0.57
CACNA2D3-201ENST00000288197 KLK9Q2XQG4 91 aa11.5□□□□□ -0.57
CACNA2D3-201ENST00000288197 NTM-AS1Q6ZSK4 140 aa11.5□□□□□ -0.57
CACNA2D3-201ENST00000288197 A0A087WYN8 130 aa11.5□□□□□ -0.57
CACNA2D3-201ENST00000288197 PRORYQ9H606 182 aa11.5□□□□□ -0.57
CACNA2D3-201ENST00000288197 ATRQ13535 2644 aa11.49□□□□□ -0.57
CACNA2D3-201ENST00000288197 USP24Q9UPU5 2620 aa11.49□□□□□ -0.57
CACNA2D3-201ENST00000288197 RNF152Q8N8N0 203 aa11.49□□□□□ -0.57
CACNA2D3-201ENST00000288197 TRBV10-1A0A0K0K1A3 114 aa11.48□□□□□ -0.57
CACNA2D3-201ENST00000288197 C11orf72Q8NBR9 251 aa11.48□□□□□ -0.57
CACNA2D3-201ENST00000288197 CCL18P55774 89 aa11.48□□□□□ -0.57
CACNA2D3-201ENST00000288197 ORMDL1Q9P0S3 153 aa11.48□□□□□ -0.57
CACNA2D3-201ENST00000288197 TIMM17BO60830 172 aa11.48□□□□□ -0.57
CACNA2D3-201ENST00000288197 LINC00337Q8N6G1 96 aa11.48□□□□□ -0.57
CACNA2D3-201ENST00000288197 TMEM126AQ9H061 195 aa11.48□□□□□ -0.57
CACNA2D3-201ENST00000288197 NIPBLQ6KC79 2804 aaeCLIP11.47□□□□□ -0.57
CACNA2D3-201ENST00000288197 F5H768 121 aa11.47□□□□□ -0.57
CACNA2D3-201ENST00000288197 TRAV23DV6A0A075B6W5 121 aa11.47□□□□□ -0.57
CACNA2D3-201ENST00000288197 DNAJC9-AS1A6NH13 148 aa11.47□□□□□ -0.57
CACNA2D3-201ENST00000288197 DEFB113Q30KQ7 82 aa11.47□□□□□ -0.57
CACNA2D3-201ENST00000288197 TRACP01848 142 aa11.46□□□□□ -0.57
CACNA2D3-201ENST00000288197 C16orf74Q96GX8 76 aa11.46□□□□□ -0.58
CACNA2D3-201ENST00000288197 OVOL2Q9BRP0 275 aa11.46□□□□□ -0.58
CACNA2D3-201ENST00000288197 BRI3O95415 125 aa11.45□□□□□ -0.58
CACNA2D3-201ENST00000288197 CSMD2Q7Z408 3487 aa11.45□□□□□ -0.58
CACNA2D3-201ENST00000288197 LINC00269Q8N2A0 174 aa11.45□□□□□ -0.58
CACNA2D3-201ENST00000288197 SHISA2Q6UWI4 295 aa11.44□□□□□ -0.58
CACNA2D3-201ENST00000288197 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
CACNA2D3-201ENST00000288197 TRBV6-8A0A0A6YYG3 113 aa11.44□□□□□ -0.58
CACNA2D3-201ENST00000288197 H0YGX0 51 aa11.44□□□□□ -0.58
CACNA2D3-201ENST00000288197 LOC107984640A0A0U1RRK4 108 aa11.43□□□□□ -0.58
CACNA2D3-201ENST00000288197 FLNBO75369 2602 aaKnown RBP11.43□□□□□ -0.58
CACNA2D3-201ENST00000288197 Q6Q795 121 aa11.42□□□□□ -0.58
CACNA2D3-201ENST00000288197 CXCL5P42830 114 aa11.42□□□□□ -0.58
CACNA2D3-201ENST00000288197 DEFB135Q30KP9 77 aa11.42□□□□□ -0.58
CACNA2D3-201ENST00000288197 C3orf22Q8N5N4 141 aa11.42□□□□□ -0.58
CACNA2D3-201ENST00000288197 LINC00482Q8N8I6 264 aa11.42□□□□□ -0.58
CACNA2D3-201ENST00000288197 SMCR5Q8TEV8 140 aa11.41□□□□□ -0.58
CACNA2D3-201ENST00000288197 UBL5Q9BZL1 73 aa11.41□□□□□ -0.58
CACNA2D3-201ENST00000288197 FAM104AQ969W3 186 aa11.4□□□□□ -0.58
CACNA2D3-201ENST00000288197 UBR5O95071 2799 aaPredicted RBP11.4□□□□□ -0.58
CACNA2D3-201ENST00000288197 FAM240AA0A1B0GVK7 77 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms