RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 TINCRA0A1B0GVN0 87 aa8.2□□□□□ -1.1
SCLT1-201ENST00000281142 ESM1Q9NQ30 184 aa8.19□□□□□ -1.1
SCLT1-201ENST00000281142 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
SCLT1-201ENST00000281142 NOTCH3Q9UM47 2321 aa8.19□□□□□ -1.1
SCLT1-201ENST00000281142 SOSTDC1Q6X4U4 206 aa8.18□□□□□ -1.1
SCLT1-201ENST00000281142 DNAJC9-AS1A6NH13 148 aa8.18□□□□□ -1.1
SCLT1-201ENST00000281142 LINC00643Q86TS7 51 aa8.18□□□□□ -1.1
SCLT1-201ENST00000281142 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
SCLT1-201ENST00000281142 Q9H8V8 135 aa8.18□□□□□ -1.1
SCLT1-201ENST00000281142 ACYP1P07311 99 aa8.17□□□□□ -1.1
SCLT1-201ENST00000281142 COX7CP15954 63 aa8.17□□□□□ -1.1
SCLT1-201ENST00000281142 PSMB8P28062 276 aa8.17□□□□□ -1.1
SCLT1-201ENST00000281142 LINC00308Q8TCZ7 52 aa8.17□□□□□ -1.1
SCLT1-201ENST00000281142 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
SCLT1-201ENST00000281142 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
SCLT1-201ENST00000281142 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
SCLT1-201ENST00000281142 TRAV25A0A0B4J276 109 aa8.16□□□□□ -1.1
SCLT1-201ENST00000281142 GAGE2AQ6NT46 116 aa8.16□□□□□ -1.1
SCLT1-201ENST00000281142 WIPF1O43516 503 aa8.16□□□□□ -1.1
SCLT1-201ENST00000281142 FAM218AQ96MZ4 157 aa8.16□□□□□ -1.1
SCLT1-201ENST00000281142 hADV29S1A0JD25 119 aa8.15□□□□□ -1.1
SCLT1-201ENST00000281142 NDUFA1O15239 70 aa8.15□□□□□ -1.1
SCLT1-201ENST00000281142 CRYGAP11844 174 aa8.15□□□□□ -1.1
SCLT1-201ENST00000281142 HILS1P60008 231 aa8.15□□□□□ -1.1
SCLT1-201ENST00000281142 DAZ2Q13117 558 aaKnown RBP8.15□□□□□ -1.1
SCLT1-201ENST00000281142 HIST2H2BDQ6DRA6 164 aa8.15□□□□□ -1.1
SCLT1-201ENST00000281142 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
SCLT1-201ENST00000281142 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
SCLT1-201ENST00000281142 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
SCLT1-201ENST00000281142 IGHV3OR16-12A0A075B7B8 117 aa8.15□□□□□ -1.11
SCLT1-201ENST00000281142 ATP5G1P05496 136 aa8.15□□□□□ -1.11
SCLT1-201ENST00000281142 DEFB131AP59861 70 aa8.15□□□□□ -1.11
SCLT1-201ENST00000281142 SDIM1Q6ZPB5 146 aa8.15□□□□□ -1.11
SCLT1-201ENST00000281142 C5orf38Q86SI9 138 aa8.15□□□□□ -1.11
SCLT1-201ENST00000281142 TMEM86BQ8N661 226 aa8.14□□□□□ -1.11
SCLT1-201ENST00000281142 COX7A2LO14548 114 aa8.14□□□□□ -1.11
SCLT1-201ENST00000281142 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
SCLT1-201ENST00000281142 OR13C6PQ8NH95 151 aa8.14□□□□□ -1.11
SCLT1-201ENST00000281142 KIR2DL5BQ8NHK3 375 aa8.14□□□□□ -1.11
SCLT1-201ENST00000281142 TIMM17BO60830 172 aa8.14□□□□□ -1.11
SCLT1-201ENST00000281142 DEFB136Q30KP8 78 aa8.14□□□□□ -1.11
SCLT1-201ENST00000281142 PIK3CD-AS1Q5SR53 167 aa8.14□□□□□ -1.11
SCLT1-201ENST00000281142 HOXD3P31249 432 aaPredicted RBP8.13□□□□□ -1.11
SCLT1-201ENST00000281142 C18orf65Q6ZTR6 163 aa8.13□□□□□ -1.11
SCLT1-201ENST00000281142 Q9HAA7 133 aa8.13□□□□□ -1.11
SCLT1-201ENST00000281142 LINC00242Q5T6M2 205 aa8.13□□□□□ -1.11
SCLT1-201ENST00000281142 TRAV13-1A0A0B4J241 112 aa8.12□□□□□ -1.11
SCLT1-201ENST00000281142 RS1O15537 224 aa8.12□□□□□ -1.11
SCLT1-201ENST00000281142 OXTP01178 125 aa8.12□□□□□ -1.11
SCLT1-201ENST00000281142 BEAN1Q3B7T3 259 aa8.12□□□□□ -1.11
SCLT1-201ENST00000281142 DGAT2L7PQ6IED9 249 aa8.12□□□□□ -1.11
SCLT1-201ENST00000281142 RNASE1P07998 156 aaKnown RBP8.12□□□□□ -1.11
SCLT1-201ENST00000281142 BAALC-AS2P0C853 105 aa8.12□□□□□ -1.11
SCLT1-201ENST00000281142 CXCL5P42830 114 aa8.12□□□□□ -1.11
SCLT1-201ENST00000281142 HIST1H4AP62805 103 aaKnown RBP8.12□□□□□ -1.11
SCLT1-201ENST00000281142 CIRBPQ14011 172 aaKnown RBP8.11□□□□□ -1.11
SCLT1-201ENST00000281142 IGLV5-45A0A087WSX0 123 aa8.11□□□□□ -1.11
SCLT1-201ENST00000281142 SETD2Q9BYW2 2564 aaPredicted RBP8.11□□□□□ -1.11
SCLT1-201ENST00000281142 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
SCLT1-201ENST00000281142 SLURP1P55000 103 aa8.11□□□□□ -1.11
SCLT1-201ENST00000281142 TIRAPP58753 221 aa8.11□□□□□ -1.11
SCLT1-201ENST00000281142 ZNF702PQ9H963 129 aa8.11□□□□□ -1.11
SCLT1-201ENST00000281142 PEMTQ9UBM1 199 aa8.11□□□□□ -1.11
SCLT1-201ENST00000281142 IGLV5-39A0A0G2JS06 123 aa8.1□□□□□ -1.11
SCLT1-201ENST00000281142 C9orf129Q5T035 196 aaKnown RBP8.1□□□□□ -1.11
SCLT1-201ENST00000281142 PRIMA1Q86XR5 153 aa8.1□□□□□ -1.11
SCLT1-201ENST00000281142 DPH3Q96FX2 82 aa8.1□□□□□ -1.11
SCLT1-201ENST00000281142 WNK1Q9H4A3 2382 aa8.1□□□□□ -1.11
SCLT1-201ENST00000281142 IGHV3-53P01767 116 aa8.09□□□□□ -1.11
SCLT1-201ENST00000281142 C11orf72Q8NBR9 251 aa8.09□□□□□ -1.11
SCLT1-201ENST00000281142 ATOX1O00244 68 aa8.09□□□□□ -1.11
SCLT1-201ENST00000281142 TRACP01848 142 aa8.09□□□□□ -1.11
SCLT1-201ENST00000281142 ZNF415Q09FC8 603 aa8.09□□□□□ -1.11
SCLT1-201ENST00000281142 C4orf26Q17RF5 130 aa8.09□□□□□ -1.11
SCLT1-201ENST00000281142 DSCR8Q96T75 97 aa8.09□□□□□ -1.11
SCLT1-201ENST00000281142 JMJD1CQ15652 2540 aa8.08□□□□□ -1.12
SCLT1-201ENST00000281142 RNF152Q8N8N0 203 aa8.08□□□□□ -1.12
SCLT1-201ENST00000281142 FBN1P35555 2871 aaKnown RBP8.08□□□□□ -1.12
SCLT1-201ENST00000281142 TMEM89A2RUT3 159 aa8.07□□□□□ -1.12
SCLT1-201ENST00000281142 TMEM258P61165 79 aa8.06□□□□□ -1.12
SCLT1-201ENST00000281142 NTM-AS1Q6ZSK4 140 aa8.06□□□□□ -1.12
SCLT1-201ENST00000281142 HRCT1Q6UXD1 115 aa8.06□□□□□ -1.12
SCLT1-201ENST00000281142 F5H768 121 aa8.06□□□□□ -1.12
SCLT1-201ENST00000281142 RPL18AQ02543 176 aaKnown RBP8.06□□□□□ -1.12
SCLT1-201ENST00000281142 Q5XG85 94 aa8.06□□□□□ -1.12
SCLT1-201ENST00000281142 UPK3BQ9BT76 320 aa8.06□□□□□ -1.12
SCLT1-201ENST00000281142 XCL2Q9UBD3 114 aa8.06□□□□□ -1.12
SCLT1-201ENST00000281142 LINC00337Q8N6G1 96 aa8.05□□□□□ -1.12
SCLT1-201ENST00000281142 A0A087WYN8 130 aa8.05□□□□□ -1.12
SCLT1-201ENST00000281142 LINC01006Q8NI28 216 aa8.05□□□□□ -1.12
SCLT1-201ENST00000281142 UBE2E2Q96LR5 201 aa8.04□□□□□ -1.12
SCLT1-201ENST00000281142 C16orf95Q9H693 158 aa8.04□□□□□ -1.12
SCLT1-201ENST00000281142 TENM1Q9UKZ4 2725 aa8.04□□□□□ -1.12
SCLT1-201ENST00000281142 A0A087WVE0 104 aa8.04□□□□□ -1.12
SCLT1-201ENST00000281142 IGKV3D-7A0A0C4DH55 119 aa8.04□□□□□ -1.12
SCLT1-201ENST00000281142 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
SCLT1-201ENST00000281142 MALP21145 153 aa8.04□□□□□ -1.12
SCLT1-201ENST00000281142 MAP6D1Q9H9H5 199 aa8.04□□□□□ -1.12
SCLT1-201ENST00000281142 C14orf132Q9NPU4 83 aa8.04□□□□□ -1.12
SCLT1-201ENST00000281142 IGKV2-28A0A075B6P5 120 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms