RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 IGHV3-33P01772 117 aa10.46□□□□□ -0.74
TMEM47-201ENST00000275954 IGHV3-30-5P0DP03 117 aa10.46□□□□□ -0.74
TMEM47-201ENST00000275954 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.74
TMEM47-201ENST00000275954 FAM222AQ5U5X8 452 aa10.46□□□□□ -0.74
TMEM47-201ENST00000275954 COX7B2Q8TF08 81 aa10.46□□□□□ -0.74
TMEM47-201ENST00000275954 CSMD1Q96PZ7 3565 aa10.46□□□□□ -0.74
TMEM47-201ENST00000275954 Q9HAA7 133 aa10.45□□□□□ -0.74
TMEM47-201ENST00000275954 ATP5G1P05496 136 aa10.45□□□□□ -0.74
TMEM47-201ENST00000275954 IFITM1P13164 125 aa10.45□□□□□ -0.74
TMEM47-201ENST00000275954 G3V4G9 280 aa10.45□□□□□ -0.74
TMEM47-201ENST00000275954 FOXI1Q12951 378 aa10.45□□□□□ -0.74
TMEM47-201ENST00000275954 UBE2DNLQ8IWF7 75 aa10.45□□□□□ -0.74
TMEM47-201ENST00000275954 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
TMEM47-201ENST00000275954 TRAV13-2A0A0B4J235 113 aa10.44□□□□□ -0.74
TMEM47-201ENST00000275954 BAALC-AS2P0C853 105 aa10.44□□□□□ -0.74
TMEM47-201ENST00000275954 CSMD2Q7Z408 3487 aa10.44□□□□□ -0.74
TMEM47-201ENST00000275954 RBX1P62877 108 aa10.44□□□□□ -0.74
TMEM47-201ENST00000275954 SPART-AS1P0CW21 52 aa10.43□□□□□ -0.74
TMEM47-201ENST00000275954 KLK12Q9UKR0 248 aa10.43□□□□□ -0.74
TMEM47-201ENST00000275954 PIK3CD-AS1Q5SR53 167 aa10.43□□□□□ -0.74
TMEM47-201ENST00000275954 PRO0255Q9UI72 69 aa10.43□□□□□ -0.74
TMEM47-201ENST00000275954 C15orf53Q8NAA6 179 aa10.43□□□□□ -0.74
TMEM47-201ENST00000275954 TSPEAR-AS2P59090 65 aa10.42□□□□□ -0.74
TMEM47-201ENST00000275954 HERV-K104P63124 156 aa10.42□□□□□ -0.74
TMEM47-201ENST00000275954 Q6ZSN1 163 aa10.42□□□□□ -0.74
TMEM47-201ENST00000275954 TRAV26-1A0A087WT03 109 aa10.42□□□□□ -0.74
TMEM47-201ENST00000275954 MIAQ16674 131 aa10.41□□□□□ -0.74
TMEM47-201ENST00000275954 COX7A2LO14548 114 aa10.41□□□□□ -0.74
TMEM47-201ENST00000275954 MRPL23Q16540 153 aaKnown RBP10.41□□□□□ -0.74
TMEM47-201ENST00000275954 Q9UF83 564 aa10.41□□□□□ -0.74
TMEM47-201ENST00000275954 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.74
TMEM47-201ENST00000275954 INSL3P51460 131 aa10.4□□□□□ -0.74
TMEM47-201ENST00000275954 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.75
TMEM47-201ENST00000275954 RPL32P62910 135 aaKnown RBP10.4□□□□□ -0.75
TMEM47-201ENST00000275954 LINC00269Q8N2A0 174 aa10.39□□□□□ -0.75
TMEM47-201ENST00000275954 UBE2D4Q9Y2X8 147 aa10.39□□□□□ -0.75
TMEM47-201ENST00000275954 SPANXB1Q9NS25 103 aaPredicted RBP10.39□□□□□ -0.75
TMEM47-201ENST00000275954 RBMY1FQ15415 496 aaKnown RBP10.38□□□□□ -0.75
TMEM47-201ENST00000275954 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
TMEM47-201ENST00000275954 KIF25-AS1Q9Y6Z4 181 aa10.38□□□□□ -0.75
TMEM47-201ENST00000275954 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
TMEM47-201ENST00000275954 PYGO1Q9Y3Y4 419 aa10.38□□□□□ -0.75
TMEM47-201ENST00000275954 MXRA5Q9NR99 2828 aa10.37□□□□□ -0.75
TMEM47-201ENST00000275954 BRI3O95415 125 aa10.37□□□□□ -0.75
TMEM47-201ENST00000275954 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
TMEM47-201ENST00000275954 TEX49A0A1B0GTD5 131 aa10.37□□□□□ -0.75
TMEM47-201ENST00000275954 TRIAP1O43715 76 aa10.37□□□□□ -0.75
TMEM47-201ENST00000275954 LINC00694P0DN24 101 aa10.36□□□□□ -0.75
TMEM47-201ENST00000275954 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
TMEM47-201ENST00000275954 RETNQ9HD89 108 aa10.36□□□□□ -0.75
TMEM47-201ENST00000275954 TRBV6-8A0A0A6YYG3 113 aa10.36□□□□□ -0.75
TMEM47-201ENST00000275954 LECT2O14960 151 aa10.36□□□□□ -0.75
TMEM47-201ENST00000275954 LINC00315P59091 139 aa10.36□□□□□ -0.75
TMEM47-201ENST00000275954 KRTAP24-1Q3LI83 254 aa10.36□□□□□ -0.75
TMEM47-201ENST00000275954 SPENQ96T58 3664 aaKnown RBP10.36□□□□□ -0.75
TMEM47-201ENST00000275954 OVOL2Q9BRP0 275 aa10.36□□□□□ -0.75
TMEM47-201ENST00000275954 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
TMEM47-201ENST00000275954 TRBV10-2A0A0K0K1G8 114 aa10.35□□□□□ -0.75
TMEM47-201ENST00000275954 PSCAO43653 123 aa10.35□□□□□ -0.75
TMEM47-201ENST00000275954 NBPF19A0A087WUL8 3843 aa10.35□□□□□ -0.75
TMEM47-201ENST00000275954 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
TMEM47-201ENST00000275954 CRYBA4P53673 196 aa10.34□□□□□ -0.75
TMEM47-201ENST00000275954 SHISA2Q6UWI4 295 aa10.34□□□□□ -0.75
TMEM47-201ENST00000275954 SPAG11BQ08648 103 aa10.33□□□□□ -0.76
TMEM47-201ENST00000275954 NCR3O14931 201 aa10.33□□□□□ -0.76
TMEM47-201ENST00000275954 MRPS36P82909 103 aaKnown RBP10.33□□□□□ -0.76
TMEM47-201ENST00000275954 CAMK2N2Q96S95 79 aa10.33□□□□□ -0.76
TMEM47-201ENST00000275954 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
TMEM47-201ENST00000275954 UFSP1Q6NVU6 142 aa10.32□□□□□ -0.76
TMEM47-201ENST00000275954 C1orf43Q9BWL3 253 aa10.32□□□□□ -0.76
TMEM47-201ENST00000275954 UBE2D1P51668 147 aa10.32□□□□□ -0.76
TMEM47-201ENST00000275954 LINC00242Q5T6M2 205 aa10.32□□□□□ -0.76
TMEM47-201ENST00000275954 TIRAPP58753 221 aa10.32□□□□□ -0.76
TMEM47-201ENST00000275954 HAMPP81172 84 aa10.32□□□□□ -0.76
TMEM47-201ENST00000275954 COX6A2Q02221 97 aa10.31□□□□□ -0.76
TMEM47-201ENST00000275954 MT-ATP8P03928 68 aa10.31□□□□□ -0.76
TMEM47-201ENST00000275954 CHCHD7Q9BUK0 85 aa10.31□□□□□ -0.76
TMEM47-201ENST00000275954 HIGD2BQ4VC39 106 aa10.3□□□□□ -0.76
TMEM47-201ENST00000275954 REG3AQ06141 175 aa10.3□□□□□ -0.76
TMEM47-201ENST00000275954 NDUFA1O15239 70 aa10.3□□□□□ -0.76
TMEM47-201ENST00000275954 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
TMEM47-201ENST00000275954 UBE2D3P61077 147 aa10.29□□□□□ -0.76
TMEM47-201ENST00000275954 UBE2D2P62837 147 aa10.29□□□□□ -0.76
TMEM47-201ENST00000275954 NKAPP1Q8N9T2 125 aa10.29□□□□□ -0.76
TMEM47-201ENST00000275954 CHCHD10Q8WYQ3 142 aaPredicted RBP10.29□□□□□ -0.76
TMEM47-201ENST00000275954 IGLV1-51P01701 117 aa10.29□□□□□ -0.76
TMEM47-201ENST00000275954 FAM19A4Q96LR4 140 aa10.29□□□□□ -0.76
TMEM47-201ENST00000275954 CDC42SE2Q9NRR3 84 aa10.29□□□□□ -0.76
TMEM47-201ENST00000275954 CYSRT1A8MQ03 144 aa10.28□□□□□ -0.76
TMEM47-201ENST00000275954 GHRHP01286 108 aa10.28□□□□□ -0.76
TMEM47-201ENST00000275954 SLPIP03973 132 aa10.28□□□□□ -0.76
TMEM47-201ENST00000275954 ORMDL1Q9P0S3 153 aa10.28□□□□□ -0.76
TMEM47-201ENST00000275954 IGHV4-28A0A0C4DH34 117 aa10.28□□□□□ -0.76
TMEM47-201ENST00000275954 IGKV3D-7A0A0C4DH55 119 aa10.28□□□□□ -0.76
TMEM47-201ENST00000275954 SPANXCQ9NY87 97 aa10.28□□□□□ -0.76
TMEM47-201ENST00000275954 IGLV4-60A0A075B6I1 120 aa10.27□□□□□ -0.77
TMEM47-201ENST00000275954 KRTAP1-3Q8IUG1 177 aa10.27□□□□□ -0.77
TMEM47-201ENST00000275954 H3BT86 120 aa10.27□□□□□ -0.77
TMEM47-201ENST00000275954 B5MCH6 92 aa10.27□□□□□ -0.77
TMEM47-201ENST00000275954 DEFB105AQ8NG35 78 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms