RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 HIGD2AQ9BW72 106 aa9.94□□□□□ -0.82
NPC1-201ENST00000269228 COX7BP24311 80 aa9.93□□□□□ -0.82
NPC1-201ENST00000269228 LY6G6CO95867 125 aa9.93□□□□□ -0.82
NPC1-201ENST00000269228 CD164L2Q6UWJ8 174 aa9.93□□□□□ -0.82
NPC1-201ENST00000269228 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
NPC1-201ENST00000269228 IBA57-AS1B1ANH7 110 aa9.92□□□□□ -0.82
NPC1-201ENST00000269228 MAPKAPK5-AS1Q8N8E1 139 aa9.92□□□□□ -0.82
NPC1-201ENST00000269228 CHD9Q3L8U1 2897 aa9.92□□□□□ -0.82
NPC1-201ENST00000269228 FAM236AA0A1B0GUQ0 79 aa9.91□□□□□ -0.82
NPC1-201ENST00000269228 FAM236BA0A1B0GV22 79 aa9.91□□□□□ -0.82
NPC1-201ENST00000269228 Q8N2B8 174 aa9.91□□□□□ -0.82
NPC1-201ENST00000269228 A0A087WZ39 114 aa9.9□□□□□ -0.82
NPC1-201ENST00000269228 FAM19A5Q7Z5A7 132 aaPredicted RBP9.9□□□□□ -0.82
NPC1-201ENST00000269228 NDUFS5O43920 106 aa9.9□□□□□ -0.82
NPC1-201ENST00000269228 MT-ATP8P03928 68 aa9.9□□□□□ -0.82
NPC1-201ENST00000269228 LINC00308Q8TCZ7 52 aa9.9□□□□□ -0.82
NPC1-201ENST00000269228 Q6ZTC4 211 aa9.9□□□□□ -0.83
NPC1-201ENST00000269228 B9D2Q9BPU9 175 aa9.89□□□□□ -0.83
NPC1-201ENST00000269228 MRPS36P82909 103 aaKnown RBP9.88□□□□□ -0.83
NPC1-201ENST00000269228 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
NPC1-201ENST00000269228 CDC42SE2Q9NRR3 84 aa9.88□□□□□ -0.83
NPC1-201ENST00000269228 RBM3P98179 157 aaKnown RBP9.87□□□□□ -0.83
NPC1-201ENST00000269228 A0A0B4J2C4 111 aa9.87□□□□□ -0.83
NPC1-201ENST00000269228 TRBV10-2A0A0K0K1G8 114 aa9.87□□□□□ -0.83
NPC1-201ENST00000269228 H3BQ85 93 aa9.87□□□□□ -0.83
NPC1-201ENST00000269228 FAM19A1Q7Z5A9 133 aa9.87□□□□□ -0.83
NPC1-201ENST00000269228 LRCOL1A6NCL2 159 aa9.86□□□□□ -0.83
NPC1-201ENST00000269228 JMJD7-PLA2G4BH0Y9G9 81 aa9.86□□□□□ -0.83
NPC1-201ENST00000269228 UBE2D1P51668 147 aa9.86□□□□□ -0.83
NPC1-201ENST00000269228 NREPQ16612 68 aa9.86□□□□□ -0.83
NPC1-201ENST00000269228 FHL2Q14192 279 aa9.86□□□□□ -0.83
NPC1-201ENST00000269228 AGRNO00468 2067 aa9.86□□□□□ -0.83
NPC1-201ENST00000269228 J3KT08 172 aa9.86□□□□□ -0.83
NPC1-201ENST00000269228 COX8CQ7Z4L0 72 aa9.86□□□□□ -0.83
NPC1-201ENST00000269228 A0A096LNI7 61 aa9.85□□□□□ -0.83
NPC1-201ENST00000269228 TMEM256-PLSCR3K7ERE1 68 aa9.85□□□□□ -0.83
NPC1-201ENST00000269228 ACYP1P07311 99 aa9.85□□□□□ -0.83
NPC1-201ENST00000269228 H3BT86 120 aa9.84□□□□□ -0.83
NPC1-201ENST00000269228 TCL1BO95988 128 aa9.84□□□□□ -0.83
NPC1-201ENST00000269228 SPANXB1Q9NS25 103 aaPredicted RBP9.84□□□□□ -0.83
NPC1-201ENST00000269228 IGKV3D-7A0A0C4DH55 119 aa9.84□□□□□ -0.83
NPC1-201ENST00000269228 IGIPA6NJ69 53 aa9.84□□□□□ -0.83
NPC1-201ENST00000269228 IGLV4-69A0A075B6H9 119 aa9.83□□□□□ -0.84
NPC1-201ENST00000269228 A0A1B0GX51 115 aa9.83□□□□□ -0.84
NPC1-201ENST00000269228 NDUFB1O75438 58 aa9.83□□□□□ -0.84
NPC1-201ENST00000269228 NUPR2A6NF83 97 aa9.83□□□□□ -0.84
NPC1-201ENST00000269228 COL27A1Q8IZC6 1860 aaPredicted RBP9.82□□□□□ -0.84
NPC1-201ENST00000269228 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
NPC1-201ENST00000269228 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
NPC1-201ENST00000269228 Q6ZSN1 163 aa9.82□□□□□ -0.84
NPC1-201ENST00000269228 LINC00242Q5T6M2 205 aa9.82□□□□□ -0.84
NPC1-201ENST00000269228 URB1-AS1Q96HZ7 61 aa9.82□□□□□ -0.84
NPC1-201ENST00000269228 MKI67P46013 3256 aaKnown RBP9.82□□□□□ -0.84
NPC1-201ENST00000269228 LINC00694P0DN24 101 aa9.81□□□□□ -0.84
NPC1-201ENST00000269228 BEAN1Q3B7T3 259 aa9.81□□□□□ -0.84
NPC1-201ENST00000269228 LAMA3Q16787 3333 aa9.81□□□□□ -0.84
NPC1-201ENST00000269228 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
NPC1-201ENST00000269228 C6orf99Q4VX62 202 aa9.81□□□□□ -0.84
NPC1-201ENST00000269228 CHCHD7Q9BUK0 85 aa9.81□□□□□ -0.84
NPC1-201ENST00000269228 IGLV4-60A0A075B6I1 120 aa9.81□□□□□ -0.84
NPC1-201ENST00000269228 C14orf132Q9NPU4 83 aa9.8□□□□□ -0.84
NPC1-201ENST00000269228 KRTAP24-1Q3LI83 254 aa9.8□□□□□ -0.84
NPC1-201ENST00000269228 SLPIP03973 132 aa9.8□□□□□ -0.84
NPC1-201ENST00000269228 LINC00310P59036 64 aa9.8□□□□□ -0.84
NPC1-201ENST00000269228 CYSRT1A8MQ03 144 aa9.79□□□□□ -0.84
NPC1-201ENST00000269228 TIMM17BO60830 172 aa9.78□□□□□ -0.84
NPC1-201ENST00000269228 Q8IZM0 81 aa9.78□□□□□ -0.84
NPC1-201ENST00000269228 POM121L12Q8N7R1 296 aa9.78□□□□□ -0.84
NPC1-201ENST00000269228 TRIAP1O43715 76 aa9.77□□□□□ -0.84
NPC1-201ENST00000269228 FHL3Q13643 280 aa9.77□□□□□ -0.84
NPC1-201ENST00000269228 C7orf33Q8WU49 177 aa9.77□□□□□ -0.84
NPC1-201ENST00000269228 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
NPC1-201ENST00000269228 ATOX1O00244 68 aa9.77□□□□□ -0.85
NPC1-201ENST00000269228 UNQ6190/PRO20217Q6UXQ8 127 aa9.77□□□□□ -0.85
NPC1-201ENST00000269228 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.85
NPC1-201ENST00000269228 FSHBP01225 129 aa9.76□□□□□ -0.85
NPC1-201ENST00000269228 RPL37AP8A6NKH3 93 aa9.75□□□□□ -0.85
NPC1-201ENST00000269228 M0R378 163 aa9.75□□□□□ -0.85
NPC1-201ENST00000269228 PDE6GP18545 87 aa9.75□□□□□ -0.85
NPC1-201ENST00000269228 COX6A2Q02221 97 aa9.74□□□□□ -0.85
NPC1-201ENST00000269228 TEX49A0A1B0GTD5 131 aa9.74□□□□□ -0.85
NPC1-201ENST00000269228 C2orf91Q6ZV80 131 aa9.74□□□□□ -0.85
NPC1-201ENST00000269228 MRPL55Q7Z7F7 128 aaKnown RBP9.74□□□□□ -0.85
NPC1-201ENST00000269228 SMIM1B2RUZ4 78 aa9.74□□□□□ -0.85
NPC1-201ENST00000269228 H0Y9J4 135 aa9.74□□□□□ -0.85
NPC1-201ENST00000269228 WFDC10BQ8IUB3 73 aa9.74□□□□□ -0.85
NPC1-201ENST00000269228 BRCA2P51587 3418 aa9.73□□□□□ -0.85
NPC1-201ENST00000269228 C9orf116Q5BN46 136 aaPredicted RBP9.73□□□□□ -0.85
NPC1-201ENST00000269228 LYPD5Q6UWN5 251 aa9.73□□□□□ -0.85
NPC1-201ENST00000269228 CELA1Q9UNI1 258 aa9.73□□□□□ -0.85
NPC1-201ENST00000269228 C11orf72Q8NBR9 251 aa9.73□□□□□ -0.85
NPC1-201ENST00000269228 TRANK1O15050 2925 aa9.72□□□□□ -0.85
NPC1-201ENST00000269228 C5orf47Q569G3 176 aa9.72□□□□□ -0.85
NPC1-201ENST00000269228 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
NPC1-201ENST00000269228 TRBV30A0A0K0K1B3 111 aa9.72□□□□□ -0.85
NPC1-201ENST00000269228 COX17Q14061 63 aa9.72□□□□□ -0.85
NPC1-201ENST00000269228 CENPEQ02224 2701 aa9.72□□□□□ -0.85
NPC1-201ENST00000269228 HELZ2Q9BYK8 2649 aaKnown RBP9.71□□□□□ -0.85
NPC1-201ENST00000269228 CSDC2Q9Y534 153 aaKnown RBP9.7□□□□□ -0.86
NPC1-201ENST00000269228 Q6ZQY7 126 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms