RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TMEM61Q8N0U2 210 aa11.58□□□□□ -0.56
MAP1LC3B-201ENST00000268607 OR13C6PQ8NH95 151 aa11.58□□□□□ -0.56
MAP1LC3B-201ENST00000268607 C2orf48Q96LS8 159 aa11.58□□□□□ -0.56
MAP1LC3B-201ENST00000268607 TMEM89A2RUT3 159 aa11.57□□□□□ -0.56
MAP1LC3B-201ENST00000268607 K7EQG2 157 aa11.57□□□□□ -0.56
MAP1LC3B-201ENST00000268607 WIPF1O43516 503 aa11.57□□□□□ -0.56
MAP1LC3B-201ENST00000268607 MRPS36P82909 103 aaKnown RBP11.57□□□□□ -0.56
MAP1LC3B-201ENST00000268607 HTN1P15515 57 aa11.56□□□□□ -0.56
MAP1LC3B-201ENST00000268607 RPS28P62857 69 aaKnown RBP11.56□□□□□ -0.56
MAP1LC3B-201ENST00000268607 KIR2DL5BQ8NHK3 375 aa11.56□□□□□ -0.56
MAP1LC3B-201ENST00000268607 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
MAP1LC3B-201ENST00000268607 CRYGAP11844 174 aa11.56□□□□□ -0.56
MAP1LC3B-201ENST00000268607 ATP5G1P05496 136 aa11.55□□□□□ -0.56
MAP1LC3B-201ENST00000268607 LINC01006Q8NI28 216 aa11.55□□□□□ -0.56
MAP1LC3B-201ENST00000268607 VSIG2Q96IQ7 327 aa11.55□□□□□ -0.56
MAP1LC3B-201ENST00000268607 KNCNA6PVL3 124 aa11.55□□□□□ -0.56
MAP1LC3B-201ENST00000268607 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
MAP1LC3B-201ENST00000268607 PRM2P04554 102 aa11.54□□□□□ -0.56
MAP1LC3B-201ENST00000268607 NACAE9PAV3 2078 aa11.54□□□□□ -0.56
MAP1LC3B-201ENST00000268607 DAZ2Q13117 558 aaKnown RBP11.53□□□□□ -0.56
MAP1LC3B-201ENST00000268607 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
MAP1LC3B-201ENST00000268607 DAZ3Q9NR90 486 aaKnown RBP11.53□□□□□ -0.56
MAP1LC3B-201ENST00000268607 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
MAP1LC3B-201ENST00000268607 PROK1P58294 105 aa11.53□□□□□ -0.56
MAP1LC3B-201ENST00000268607 CITED2Q99967 270 aaPredicted RBP11.53□□□□□ -0.56
MAP1LC3B-201ENST00000268607 PYGO1Q9Y3Y4 419 aa11.53□□□□□ -0.56
MAP1LC3B-201ENST00000268607 DEFB131AP59861 70 aa11.52□□□□□ -0.57
MAP1LC3B-201ENST00000268607 HILS1P60008 231 aa11.52□□□□□ -0.57
MAP1LC3B-201ENST00000268607 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.57
MAP1LC3B-201ENST00000268607 PKD1L1Q8TDX9 2849 aa11.52□□□□□ -0.57
MAP1LC3B-201ENST00000268607 RS1O15537 224 aa11.52□□□□□ -0.57
MAP1LC3B-201ENST00000268607 TRACP01848 142 aa11.52□□□□□ -0.57
MAP1LC3B-201ENST00000268607 Q8N2B8 174 aa11.52□□□□□ -0.57
MAP1LC3B-201ENST00000268607 IGHV1OR15-1A0A075B7D0 117 aa11.51□□□□□ -0.57
MAP1LC3B-201ENST00000268607 C4orf26Q17RF5 130 aa11.51□□□□□ -0.57
MAP1LC3B-201ENST00000268607 DPH3Q96FX2 82 aa11.51□□□□□ -0.57
MAP1LC3B-201ENST00000268607 CXCL5P42830 114 aa11.51□□□□□ -0.57
MAP1LC3B-201ENST00000268607 RNF152Q8N8N0 203 aa11.51□□□□□ -0.57
MAP1LC3B-201ENST00000268607 OXTP01178 125 aa11.5□□□□□ -0.57
MAP1LC3B-201ENST00000268607 Q9UF83 564 aa11.5□□□□□ -0.57
MAP1LC3B-201ENST00000268607 A0A0U1RRA0 63 aa11.5□□□□□ -0.57
MAP1LC3B-201ENST00000268607 TINCRA0A1B0GVN0 87 aa11.5□□□□□ -0.57
MAP1LC3B-201ENST00000268607 RNASE1P07998 156 aaKnown RBP11.5□□□□□ -0.57
MAP1LC3B-201ENST00000268607 DSCR8Q96T75 97 aa11.5□□□□□ -0.57
MAP1LC3B-201ENST00000268607 TIRAPP58753 221 aa11.49□□□□□ -0.57
MAP1LC3B-201ENST00000268607 PEMTQ9UBM1 199 aa11.49□□□□□ -0.57
MAP1LC3B-201ENST00000268607 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
MAP1LC3B-201ENST00000268607 RBMY1A1P0DJD3 496 aaKnown RBP11.49□□□□□ -0.57
MAP1LC3B-201ENST00000268607 RBMY1CP0DJD4 496 aa11.49□□□□□ -0.57
MAP1LC3B-201ENST00000268607 RBMY1FQ15415 496 aaKnown RBP11.49□□□□□ -0.57
MAP1LC3B-201ENST00000268607 TMEM86BQ8N661 226 aa11.49□□□□□ -0.57
MAP1LC3B-201ENST00000268607 NBEAL2Q6ZNJ1 2754 aa11.49□□□□□ -0.57
MAP1LC3B-201ENST00000268607 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.48□□□□□ -0.57
MAP1LC3B-201ENST00000268607 IGKV2-29A2NJV5 120 aaPredicted RBP11.48□□□□□ -0.57
MAP1LC3B-201ENST00000268607 ATOX1O00244 68 aa11.48□□□□□ -0.57
MAP1LC3B-201ENST00000268607 HIST1H4AP62805 103 aaKnown RBP11.48□□□□□ -0.57
MAP1LC3B-201ENST00000268607 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
MAP1LC3B-201ENST00000268607 BAALC-AS2P0C853 105 aa11.47□□□□□ -0.57
MAP1LC3B-201ENST00000268607 KRTAP10-3P60369 221 aa11.47□□□□□ -0.57
MAP1LC3B-201ENST00000268607 HRCT1Q6UXD1 115 aa11.47□□□□□ -0.57
MAP1LC3B-201ENST00000268607 CDKN2A-AS1Q9UH64 79 aa11.47□□□□□ -0.57
MAP1LC3B-201ENST00000268607 COX7A2LO14548 114 aa11.46□□□□□ -0.57
MAP1LC3B-201ENST00000268607 UBE2D4Q9Y2X8 147 aa11.46□□□□□ -0.57
MAP1LC3B-201ENST00000268607 C22orf24Q9Y442 160 aa11.46□□□□□ -0.57
MAP1LC3B-201ENST00000268607 F5H768 121 aa11.46□□□□□ -0.58
MAP1LC3B-201ENST00000268607 TIMM17BO60830 172 aa11.45□□□□□ -0.58
MAP1LC3B-201ENST00000268607 LINC00308Q8TCZ7 52 aa11.45□□□□□ -0.58
MAP1LC3B-201ENST00000268607 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
MAP1LC3B-201ENST00000268607 CHCHD7Q9BUK0 85 aa11.45□□□□□ -0.58
MAP1LC3B-201ENST00000268607 RBMY1BA6NDE4 496 aaKnown RBP11.45□□□□□ -0.58
MAP1LC3B-201ENST00000268607 RBMY1EA6NEQ0 496 aaKnown RBP11.45□□□□□ -0.58
MAP1LC3B-201ENST00000268607 RBMY1DP0C7P1 496 aaKnown RBP11.45□□□□□ -0.58
MAP1LC3B-201ENST00000268607 C4orf3Q8WVX3 66 aa11.45□□□□□ -0.58
MAP1LC3B-201ENST00000268607 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.44□□□□□ -0.58
MAP1LC3B-201ENST00000268607 TMEM258P61165 79 aa11.44□□□□□ -0.58
MAP1LC3B-201ENST00000268607 IGHV3-38A0A0C4DH36 116 aa11.43□□□□□ -0.58
MAP1LC3B-201ENST00000268607 NDUFA1O15239 70 aa11.43□□□□□ -0.58
MAP1LC3B-201ENST00000268607 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
MAP1LC3B-201ENST00000268607 RPL18AQ02543 176 aaKnown RBP11.43□□□□□ -0.58
MAP1LC3B-201ENST00000268607 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
MAP1LC3B-201ENST00000268607 BEAN1Q3B7T3 259 aa11.43□□□□□ -0.58
MAP1LC3B-201ENST00000268607 Q6ZSN1 163 aa11.43□□□□□ -0.58
MAP1LC3B-201ENST00000268607 Q9H8V8 135 aa11.43□□□□□ -0.58
MAP1LC3B-201ENST00000268607 IGKV3D-7A0A0C4DH55 119 aa11.42□□□□□ -0.58
MAP1LC3B-201ENST00000268607 Q5XG85 94 aa11.42□□□□□ -0.58
MAP1LC3B-201ENST00000268607 A0A087WVE0 104 aa11.42□□□□□ -0.58
MAP1LC3B-201ENST00000268607 SPATA3Q8NHX4 192 aa11.42□□□□□ -0.58
MAP1LC3B-201ENST00000268607 FAM218AQ96MZ4 157 aa11.42□□□□□ -0.58
MAP1LC3B-201ENST00000268607 COX6A2Q02221 97 aa11.41□□□□□ -0.58
MAP1LC3B-201ENST00000268607 DEFB114Q30KQ6 69 aa11.41□□□□□ -0.58
MAP1LC3B-201ENST00000268607 SOSTDC1Q6X4U4 206 aa11.41□□□□□ -0.58
MAP1LC3B-201ENST00000268607 MAP6D1Q9H9H5 199 aa11.41□□□□□ -0.58
MAP1LC3B-201ENST00000268607 UPK3BQ9BT76 320 aa11.41□□□□□ -0.58
MAP1LC3B-201ENST00000268607 Q9HAA7 133 aa11.41□□□□□ -0.58
MAP1LC3B-201ENST00000268607 CCL24O00175 119 aa11.4□□□□□ -0.58
MAP1LC3B-201ENST00000268607 SERP2Q8N6R1 65 aa11.4□□□□□ -0.59
MAP1LC3B-201ENST00000268607 INAFM2P0DMQ5 153 aa11.39□□□□□ -0.59
MAP1LC3B-201ENST00000268607 IGHV3OR16-12A0A075B7B8 117 aa11.37□□□□□ -0.59
MAP1LC3B-201ENST00000268607 XCL2Q9UBD3 114 aa11.37□□□□□ -0.59
MAP1LC3B-201ENST00000268607 C16orf95Q9H693 158 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms