RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 STHQ8IWL8 128 aa11.86□□□□□ -0.51
GPC1-201ENST00000264039 SOSTDC1Q6X4U4 206 aa11.85□□□□□ -0.51
GPC1-201ENST00000264039 SMIM11BQ8TCY0 68 aa11.85□□□□□ -0.51
GPC1-201ENST00000264039 DCANP1Q8TF63 244 aa11.85□□□□□ -0.51
GPC1-201ENST00000264039 A0A096LPF7 62 aa11.84□□□□□ -0.51
GPC1-201ENST00000264039 XCL1P47992 114 aa11.84□□□□□ -0.51
GPC1-201ENST00000264039 BRK1Q8WUW1 75 aa11.84□□□□□ -0.51
GPC1-201ENST00000264039 OVOL2Q9BRP0 275 aa11.84□□□□□ -0.51
GPC1-201ENST00000264039 PIMREGQ9BSJ6 248 aa11.84□□□□□ -0.51
GPC1-201ENST00000264039 PYGO1Q9Y3Y4 419 aa11.84□□□□□ -0.51
GPC1-201ENST00000264039 ZNF462Q96JM2 2506 aa11.84□□□□□ -0.51
GPC1-201ENST00000264039 IGHV4-59P01825 116 aa11.84□□□□□ -0.51
GPC1-201ENST00000264039 PSMB8P28062 276 aa11.84□□□□□ -0.51
GPC1-201ENST00000264039 LINC00242Q5T6M2 205 aa11.83□□□□□ -0.52
GPC1-201ENST00000264039 FAM19A1Q7Z5A9 133 aa11.83□□□□□ -0.52
GPC1-201ENST00000264039 SLURP1P55000 103 aa11.83□□□□□ -0.52
GPC1-201ENST00000264039 SCXQ7RTU7 201 aa11.83□□□□□ -0.52
GPC1-201ENST00000264039 DPH3Q96FX2 82 aa11.83□□□□□ -0.52
GPC1-201ENST00000264039 IGHG2P01859 326 aa11.82□□□□□ -0.52
GPC1-201ENST00000264039 PRB2P02812 416 aaPredicted RBP11.82□□□□□ -0.52
GPC1-201ENST00000264039 IGHV4-61A0A0C4DH41 118 aa11.81□□□□□ -0.52
GPC1-201ENST00000264039 INSP01308 110 aa11.81□□□□□ -0.52
GPC1-201ENST00000264039 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
GPC1-201ENST00000264039 F8P00451 2351 aa11.81□□□□□ -0.52
GPC1-201ENST00000264039 RPL35AP18077 110 aaKnown RBP11.81□□□□□ -0.52
GPC1-201ENST00000264039 NBL1P41271 181 aa11.81□□□□□ -0.52
GPC1-201ENST00000264039 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.81□□□□□ -0.52
GPC1-201ENST00000264039 CHCHD7Q9BUK0 85 aa11.81□□□□□ -0.52
GPC1-201ENST00000264039 NOP10Q9NPE3 64 aaKnown RBP11.81□□□□□ -0.52
GPC1-201ENST00000264039 MPLKIPQ8TAP9 179 aa11.8□□□□□ -0.52
GPC1-201ENST00000264039 H0YGX0 51 aa11.8□□□□□ -0.52
GPC1-201ENST00000264039 DAD1P61803 113 aa11.8□□□□□ -0.52
GPC1-201ENST00000264039 FAM236DA0A1B0GTK5 79 aa11.8□□□□□ -0.52
GPC1-201ENST00000264039 FAM236CP0DP71 79 aa11.8□□□□□ -0.52
GPC1-201ENST00000264039 DEFB130BP0DP73 79 aa11.8□□□□□ -0.52
GPC1-201ENST00000264039 DEFB130AP0DP74 79 aa11.8□□□□□ -0.52
GPC1-201ENST00000264039 LMO4P61968 165 aa11.8□□□□□ -0.52
GPC1-201ENST00000264039 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
GPC1-201ENST00000264039 IGF2-ASQ6U949 168 aa11.79□□□□□ -0.52
GPC1-201ENST00000264039 CYSTM1Q9H1C7 97 aa11.79□□□□□ -0.52
GPC1-201ENST00000264039 LY6DQ14210 128 aa11.79□□□□□ -0.52
GPC1-201ENST00000264039 K7EQG2 157 aa11.78□□□□□ -0.52
GPC1-201ENST00000264039 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
GPC1-201ENST00000264039 LINC00337Q8N6G1 96 aa11.78□□□□□ -0.52
GPC1-201ENST00000264039 TRAV25A0A0B4J276 109 aa11.78□□□□□ -0.52
GPC1-201ENST00000264039 CRYGAP11844 174 aa11.78□□□□□ -0.52
GPC1-201ENST00000264039 PRR3P79522 188 aaKnown RBP11.78□□□□□ -0.52
GPC1-201ENST00000264039 CCL19Q99731 98 aa11.77□□□□□ -0.52
GPC1-201ENST00000264039 TIMM17BO60830 172 aa11.77□□□□□ -0.53
GPC1-201ENST00000264039 IGLV10-54A0A075B6I4 117 aa11.76□□□□□ -0.53
GPC1-201ENST00000264039 C9orf129Q5T035 196 aaKnown RBP11.76□□□□□ -0.53
GPC1-201ENST00000264039 FAM19A4Q96LR4 140 aa11.76□□□□□ -0.53
GPC1-201ENST00000264039 Q6ZTI0 123 aa11.76□□□□□ -0.53
GPC1-201ENST00000264039 COL27A1Q8IZC6 1860 aaPredicted RBP11.75□□□□□ -0.53
GPC1-201ENST00000264039 A0A1W2PPR1 153 aa11.74□□□□□ -0.53
GPC1-201ENST00000264039 ACANP16112 2415 aa11.74□□□□□ -0.53
GPC1-201ENST00000264039 CCL18P55774 89 aa11.74□□□□□ -0.53
GPC1-201ENST00000264039 ADORA2A-AS1P86434 159 aa11.74□□□□□ -0.53
GPC1-201ENST00000264039 K7EMT4 169 aa11.73□□□□□ -0.53
GPC1-201ENST00000264039 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
GPC1-201ENST00000264039 DCHS2Q6V1P9 2916 aa11.73□□□□□ -0.53
GPC1-201ENST00000264039 Q6JHZ5 121 aa11.72□□□□□ -0.53
GPC1-201ENST00000264039 LOC100131303A0A0U1RQF7 123 aa11.72□□□□□ -0.53
GPC1-201ENST00000264039 DEFB121Q5J5C9 76 aa11.71□□□□□ -0.53
GPC1-201ENST00000264039 FHL2Q14192 279 aa11.71□□□□□ -0.53
GPC1-201ENST00000264039 MSMBP08118 114 aa11.7□□□□□ -0.54
GPC1-201ENST00000264039 K7EQD1 137 aa11.7□□□□□ -0.54
GPC1-201ENST00000264039 H3BUA1 57 aa11.69□□□□□ -0.54
GPC1-201ENST00000264039 RPL28P46779 137 aaKnown RBP11.69□□□□□ -0.54
GPC1-201ENST00000264039 PF4P02776 101 aa11.69□□□□□ -0.54
GPC1-201ENST00000264039 HTN3P15516 51 aa11.68□□□□□ -0.54
GPC1-201ENST00000264039 LINC01561Q8N1V8 128 aa11.68□□□□□ -0.54
GPC1-201ENST00000264039 FAM222AQ5U5X8 452 aa11.68□□□□□ -0.54
GPC1-201ENST00000264039 C18orf65Q6ZTR6 163 aa11.68□□□□□ -0.54
GPC1-201ENST00000264039 IGHV4-30-2A0A087WSY4 118 aa11.68□□□□□ -0.54
GPC1-201ENST00000264039 ESM1Q9NQ30 184 aa11.68□□□□□ -0.54
GPC1-201ENST00000264039 F8WEM9 126 aa11.67□□□□□ -0.54
GPC1-201ENST00000264039 ZNF292O60281 2723 aa11.67□□□□□ -0.54
GPC1-201ENST00000264039 C11orf71Q6IPW1 123 aa11.67□□□□□ -0.54
GPC1-201ENST00000264039 RMI2Q96E14 147 aa11.67□□□□□ -0.54
GPC1-201ENST00000264039 CELSR1Q9NYQ6 3014 aa11.66□□□□□ -0.54
GPC1-201ENST00000264039 A6NDX4 124 aa11.66□□□□□ -0.54
GPC1-201ENST00000264039 A8MTW9 85 aa11.66□□□□□ -0.54
GPC1-201ENST00000264039 JMJD7-PLA2G4BH0Y9G9 81 aa11.66□□□□□ -0.54
GPC1-201ENST00000264039 NBEAL2Q6ZNJ1 2754 aa11.66□□□□□ -0.54
GPC1-201ENST00000264039 CHD6Q8TD26 2715 aa11.66□□□□□ -0.54
GPC1-201ENST00000264039 C6orf99Q4VX62 202 aa11.65□□□□□ -0.54
GPC1-201ENST00000264039 C2orf48Q96LS8 159 aa11.65□□□□□ -0.54
GPC1-201ENST00000264039 ITPR1Q14643 2758 aa11.65□□□□□ -0.54
GPC1-201ENST00000264039 NDUFC2O95298 119 aa11.65□□□□□ -0.54
GPC1-201ENST00000264039 RPS28P62857 69 aaKnown RBP11.65□□□□□ -0.54
GPC1-201ENST00000264039 C19orf84I3L1E1 186 aa11.64□□□□□ -0.55
GPC1-201ENST00000264039 SS18Q15532 418 aa11.64□□□□□ -0.55
GPC1-201ENST00000264039 CDC42SE2Q9NRR3 84 aa11.64□□□□□ -0.55
GPC1-201ENST00000264039 LRCOL1A6NCL2 159 aa11.64□□□□□ -0.55
GPC1-201ENST00000264039 TMEM256-PLSCR3K7ERE1 68 aa11.63□□□□□ -0.55
GPC1-201ENST00000264039 B4DSR2 109 aa11.63□□□□□ -0.55
GPC1-201ENST00000264039 K7ENP7 123 aa11.63□□□□□ -0.55
GPC1-201ENST00000264039 ANKRD17O75179 2603 aaKnown RBP11.62□□□□□ -0.55
GPC1-201ENST00000264039 Q96MF0 132 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms