RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ODF3Q96PU9 254 aa11.74□□□□□ -0.53
PDZRN3-201ENST00000263666 ATRQ13535 2644 aa11.74□□□□□ -0.53
PDZRN3-201ENST00000263666 RPL32P62910 135 aaKnown RBP11.73□□□□□ -0.53
PDZRN3-201ENST00000263666 LINC00308Q8TCZ7 52 aa11.73□□□□□ -0.53
PDZRN3-201ENST00000263666 C4orf3Q8WVX3 66 aa11.71□□□□□ -0.53
PDZRN3-201ENST00000263666 MRPS36P82909 103 aaKnown RBP11.71□□□□□ -0.53
PDZRN3-201ENST00000263666 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.53
PDZRN3-201ENST00000263666 H7C423 109 aa11.71□□□□□ -0.54
PDZRN3-201ENST00000263666 ODF3L2Q3SX64 289 aa11.71□□□□□ -0.54
PDZRN3-201ENST00000263666 IGKV3D-7A0A0C4DH55 119 aa11.71□□□□□ -0.54
PDZRN3-201ENST00000263666 FAM236AA0A1B0GUQ0 79 aa11.71□□□□□ -0.54
PDZRN3-201ENST00000263666 FAM236BA0A1B0GV22 79 aa11.71□□□□□ -0.54
PDZRN3-201ENST00000263666 FHL3Q13643 280 aa11.7□□□□□ -0.54
PDZRN3-201ENST00000263666 EDA2RQ9HAV5 297 aa11.7□□□□□ -0.54
PDZRN3-201ENST00000263666 SLPIP03973 132 aa11.7□□□□□ -0.54
PDZRN3-201ENST00000263666 EIF4EBP3O60516 100 aaPredicted RBP11.7□□□□□ -0.54
PDZRN3-201ENST00000263666 GYPEP15421 78 aa11.69□□□□□ -0.54
PDZRN3-201ENST00000263666 SMIM20Q8N5G0 67 aa11.69□□□□□ -0.54
PDZRN3-201ENST00000263666 LINC01006Q8NI28 216 aa11.69□□□□□ -0.54
PDZRN3-201ENST00000263666 DNAJC30Q96LL9 226 aa11.69□□□□□ -0.54
PDZRN3-201ENST00000263666 LINC00242Q5T6M2 205 aa11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 S100A7L2Q5SY68 101 aa11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 TRBV30A0A0K0K1B3 111 aa11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 NDUFV3P56181 108 aaKnown RBP11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 CELSR2Q9HCU4 2923 aa11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 LECT2O14960 151 aa11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 DAZ2Q13117 558 aaKnown RBP11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 DAZ4Q86SG3 579 aaKnown RBP11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 DAZ3Q9NR90 486 aaKnown RBP11.68□□□□□ -0.54
PDZRN3-201ENST00000263666 CCDC179H3BU77 68 aa11.66□□□□□ -0.54
PDZRN3-201ENST00000263666 F5H768 121 aa11.66□□□□□ -0.54
PDZRN3-201ENST00000263666 SS18Q15532 418 aa11.66□□□□□ -0.54
PDZRN3-201ENST00000263666 C9orf153Q5TBE3 101 aa11.66□□□□□ -0.54
PDZRN3-201ENST00000263666 C14orf132Q9NPU4 83 aa11.65□□□□□ -0.54
PDZRN3-201ENST00000263666 H3BT86 120 aa11.65□□□□□ -0.54
PDZRN3-201ENST00000263666 AMELXQ99217 191 aa11.65□□□□□ -0.54
PDZRN3-201ENST00000263666 C1orf158Q8N1D5 194 aa11.65□□□□□ -0.55
PDZRN3-201ENST00000263666 LINC00526Q96FQ7 95 aa11.64□□□□□ -0.55
PDZRN3-201ENST00000263666 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
PDZRN3-201ENST00000263666 NDUFA1O15239 70 aa11.64□□□□□ -0.55
PDZRN3-201ENST00000263666 TRAV13-2A0A0B4J235 113 aa11.63□□□□□ -0.55
PDZRN3-201ENST00000263666 HILS1P60008 231 aa11.63□□□□□ -0.55
PDZRN3-201ENST00000263666 LST1O00453 97 aa11.62□□□□□ -0.55
PDZRN3-201ENST00000263666 LINC00482Q8N8I6 264 aa11.62□□□□□ -0.55
PDZRN3-201ENST00000263666 DEFB135Q30KP9 77 aa11.62□□□□□ -0.55
PDZRN3-201ENST00000263666 Q8N2B8 174 aa11.62□□□□□ -0.55
PDZRN3-201ENST00000263666 LAMTOR3Q9UHA4 124 aa11.62□□□□□ -0.55
PDZRN3-201ENST00000263666 COX7A2LO14548 114 aa11.62□□□□□ -0.55
PDZRN3-201ENST00000263666 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
PDZRN3-201ENST00000263666 MXRA5Q9NR99 2828 aa11.62□□□□□ -0.55
PDZRN3-201ENST00000263666 C9orf66Q5T8R8 295 aa11.61□□□□□ -0.55
PDZRN3-201ENST00000263666 SMIM1B2RUZ4 78 aa11.61□□□□□ -0.55
PDZRN3-201ENST00000263666 RNF152Q8N8N0 203 aa11.6□□□□□ -0.55
PDZRN3-201ENST00000263666 SPANXDQ9BXN6 97 aa11.6□□□□□ -0.55
PDZRN3-201ENST00000263666 SPANXCQ9NY87 97 aa11.6□□□□□ -0.55
PDZRN3-201ENST00000263666 UBR5O95071 2799 aaPredicted RBP11.6□□□□□ -0.55
PDZRN3-201ENST00000263666 C16orf74Q96GX8 76 aa11.59□□□□□ -0.55
PDZRN3-201ENST00000263666 IGLV4-60A0A075B6I1 120 aa11.59□□□□□ -0.55
PDZRN3-201ENST00000263666 INAFM2P0DMQ5 153 aa11.59□□□□□ -0.55
PDZRN3-201ENST00000263666 HERV-K104P63124 156 aa11.59□□□□□ -0.55
PDZRN3-201ENST00000263666 TIRAPP58753 221 aa11.58□□□□□ -0.56
PDZRN3-201ENST00000263666 DAD1P61803 113 aa11.58□□□□□ -0.56
PDZRN3-201ENST00000263666 SDIM1Q6ZPB5 146 aa11.58□□□□□ -0.56
PDZRN3-201ENST00000263666 MRAPQ8TCY5 172 aa11.58□□□□□ -0.56
PDZRN3-201ENST00000263666 CDC42SE2Q9NRR3 84 aa11.58□□□□□ -0.56
PDZRN3-201ENST00000263666 SETXQ7Z333 2677 aaKnown RBP11.58□□□□□ -0.56
PDZRN3-201ENST00000263666 NCR3O14931 201 aa11.57□□□□□ -0.56
PDZRN3-201ENST00000263666 APOC4P55056 127 aa11.57□□□□□ -0.56
PDZRN3-201ENST00000263666 PRR3P79522 188 aaKnown RBP11.57□□□□□ -0.56
PDZRN3-201ENST00000263666 TRBV10-1A0A0K0K1A3 114 aa11.57□□□□□ -0.56
PDZRN3-201ENST00000263666 KLK9Q2XQG4 91 aa11.57□□□□□ -0.56
PDZRN3-201ENST00000263666 C11orf72Q8NBR9 251 aa11.57□□□□□ -0.56
PDZRN3-201ENST00000263666 NTM-AS1Q6ZSK4 140 aa11.57□□□□□ -0.56
PDZRN3-201ENST00000263666 TRAV25A0A0B4J276 109 aa11.56□□□□□ -0.56
PDZRN3-201ENST00000263666 BRI3O95415 125 aa11.55□□□□□ -0.56
PDZRN3-201ENST00000263666 LINC00269Q8N2A0 174 aa11.55□□□□□ -0.56
PDZRN3-201ENST00000263666 SOSTDC1Q6X4U4 206 aa11.55□□□□□ -0.56
PDZRN3-201ENST00000263666 UNC79Q9P2D8 2635 aa11.54□□□□□ -0.56
PDZRN3-201ENST00000263666 MRPL23Q16540 153 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-201ENST00000263666 ITPR2Q14571 2701 aa11.53□□□□□ -0.56
PDZRN3-201ENST00000263666 TRBV6-8A0A0A6YYG3 113 aa11.53□□□□□ -0.56
PDZRN3-201ENST00000263666 HAMPP81172 84 aa11.53□□□□□ -0.56
PDZRN3-201ENST00000263666 BSNQ9UPA5 3926 aa11.52□□□□□ -0.56
PDZRN3-201ENST00000263666 SMIM11BQ8TCY0 68 aa11.52□□□□□ -0.56
PDZRN3-201ENST00000263666 LITAFQ99732 161 aa11.52□□□□□ -0.56
PDZRN3-201ENST00000263666 FAM222AQ5U5X8 452 aa11.52□□□□□ -0.57
PDZRN3-201ENST00000263666 CCL18P55774 89 aa11.51□□□□□ -0.57
PDZRN3-201ENST00000263666 C9orf116Q5BN46 136 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-201ENST00000263666 KLK12Q9UKR0 248 aa11.5□□□□□ -0.57
PDZRN3-201ENST00000263666 MAST4O15021 2626 aa11.5□□□□□ -0.57
PDZRN3-201ENST00000263666 MGAM2Q2M2H8 2515 aa11.5□□□□□ -0.57
PDZRN3-201ENST00000263666 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
PDZRN3-201ENST00000263666 NIPBLQ6KC79 2804 aaeCLIP11.49□□□□□ -0.57
PDZRN3-201ENST00000263666 A0A087WYN8 130 aa11.49□□□□□ -0.57
PDZRN3-201ENST00000263666 A0A1B0GX51 115 aa11.48□□□□□ -0.57
PDZRN3-201ENST00000263666 LINC00337Q8N6G1 96 aa11.47□□□□□ -0.57
PDZRN3-201ENST00000263666 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms