RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 SETXQ7Z333 2677 aaKnown RBP12.8□□□□□ -0.36
TRAF4-201ENST00000262395 FAM240AA0A1B0GVK7 77 aa12.8□□□□□ -0.36
TRAF4-201ENST00000262395 CCDC168Q8NDH2 2452 aa12.79□□□□□ -0.36
TRAF4-201ENST00000262395 NOP10Q9NPE3 64 aaKnown RBP12.79□□□□□ -0.36
TRAF4-201ENST00000262395 KLK5Q9Y337 293 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-201ENST00000262395 ZNF469Q96JG9 3925 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-201ENST00000262395 K7EQD1 137 aa12.78□□□□□ -0.36
TRAF4-201ENST00000262395 PLA2G2AP14555 144 aa12.78□□□□□ -0.36
TRAF4-201ENST00000262395 MRPL23Q16540 153 aaKnown RBP12.78□□□□□ -0.36
TRAF4-201ENST00000262395 CDC42SE2Q9NRR3 84 aa12.78□□□□□ -0.36
TRAF4-201ENST00000262395 F5H768 121 aa12.78□□□□□ -0.36
TRAF4-201ENST00000262395 TRBV7-7A0A0K0K1E9 115 aa12.78□□□□□ -0.36
TRAF4-201ENST00000262395 DSCR9P59020 149 aa12.78□□□□□ -0.36
TRAF4-201ENST00000262395 ZNF462Q96JM2 2506 aa12.77□□□□□ -0.37
TRAF4-201ENST00000262395 NBPF19A0A087WUL8 3843 aa12.76□□□□□ -0.37
TRAF4-201ENST00000262395 J3QLI3 93 aa12.76□□□□□ -0.37
TRAF4-201ENST00000262395 IGHV4-31P0DP07 118 aa12.76□□□□□ -0.37
TRAF4-201ENST00000262395 UBE2L6O14933 153 aa12.76□□□□□ -0.37
TRAF4-201ENST00000262395 C4orf3Q8WVX3 66 aa12.76□□□□□ -0.37
TRAF4-201ENST00000262395 C22orf24Q9Y442 160 aa12.76□□□□□ -0.37
TRAF4-201ENST00000262395 GAGE2AQ6NT46 116 aa12.75□□□□□ -0.37
TRAF4-201ENST00000262395 MIR7-3HGQ8N6C7 128 aa12.75□□□□□ -0.37
TRAF4-201ENST00000262395 WFDC10AQ9H1F0 79 aa12.75□□□□□ -0.37
TRAF4-201ENST00000262395 KRTAP10-9P60411 292 aa12.74□□□□□ -0.37
TRAF4-201ENST00000262395 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
TRAF4-201ENST00000262395 FN1P02751 2386 aaKnown RBP12.73□□□□□ -0.37
TRAF4-201ENST00000262395 C11orf68Q9H3H3 251 aaKnown RBP12.72□□□□□ -0.37
TRAF4-201ENST00000262395 CR1P17927 2039 aa12.72□□□□□ -0.37
TRAF4-201ENST00000262395 TRGV2A0A075B6R0 118 aa12.72□□□□□ -0.37
TRAF4-201ENST00000262395 FSHBP01225 129 aa12.72□□□□□ -0.37
TRAF4-201ENST00000262395 LINC00158P58513 81 aa12.72□□□□□ -0.37
TRAF4-201ENST00000262395 C9orf129Q5T035 196 aaKnown RBP12.72□□□□□ -0.37
TRAF4-201ENST00000262395 C3orf22Q8N5N4 141 aa12.72□□□□□ -0.37
TRAF4-201ENST00000262395 TMEM243Q9BU79 118 aa12.72□□□□□ -0.37
TRAF4-201ENST00000262395 CSDC2Q9Y534 153 aaKnown RBP12.72□□□□□ -0.37
TRAF4-201ENST00000262395 CRPP02741 224 aa12.71□□□□□ -0.37
TRAF4-201ENST00000262395 ATP5G1P05496 136 aa12.71□□□□□ -0.37
TRAF4-201ENST00000262395 PFN2P35080 140 aa12.71□□□□□ -0.37
TRAF4-201ENST00000262395 TRACP01848 142 aa12.71□□□□□ -0.38
TRAF4-201ENST00000262395 PRB1P04280 392 aa12.71□□□□□ -0.38
TRAF4-201ENST00000262395 SND1-IT1Q9HBX3 110 aa12.71□□□□□ -0.38
TRAF4-201ENST00000262395 IGKV2-28A0A075B6P5 120 aa12.7□□□□□ -0.38
TRAF4-201ENST00000262395 A0A087WYN8 130 aa12.7□□□□□ -0.38
TRAF4-201ENST00000262395 IGKV2D-28P01615 120 aa12.7□□□□□ -0.38
TRAF4-201ENST00000262395 RPL35AP18077 110 aaKnown RBP12.7□□□□□ -0.38
TRAF4-201ENST00000262395 HIST2H2BCQ6DN03 193 aa12.7□□□□□ -0.38
TRAF4-201ENST00000262395 COPS9Q8WXC6 57 aa12.7□□□□□ -0.38
TRAF4-201ENST00000262395 IL17DQ8TAD2 202 aa12.69□□□□□ -0.38
TRAF4-201ENST00000262395 COX7B2Q8TF08 81 aa12.69□□□□□ -0.38
TRAF4-201ENST00000262395 IGLV4-60A0A075B6I1 120 aa12.69□□□□□ -0.38
TRAF4-201ENST00000262395 ACYP1P07311 99 aa12.69□□□□□ -0.38
TRAF4-201ENST00000262395 TRBV10-1A0A0K0K1A3 114 aa12.68□□□□□ -0.38
TRAF4-201ENST00000262395 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
TRAF4-201ENST00000262395 MALP21145 153 aa12.68□□□□□ -0.38
TRAF4-201ENST00000262395 UQCRQO14949 82 aa12.68□□□□□ -0.38
TRAF4-201ENST00000262395 FAM19A3Q7Z5A8 133 aa12.68□□□□□ -0.38
TRAF4-201ENST00000262395 LINC00643Q86TS7 51 aa12.68□□□□□ -0.38
TRAF4-201ENST00000262395 SMIM11BQ8TCY0 68 aa12.68□□□□□ -0.38
TRAF4-201ENST00000262395 C14orf132Q9NPU4 83 aa12.67□□□□□ -0.38
TRAF4-201ENST00000262395 IMUPQ9GZP8 106 aa12.66□□□□□ -0.38
TRAF4-201ENST00000262395 NBEAL2Q6ZNJ1 2754 aa12.66□□□□□ -0.38
TRAF4-201ENST00000262395 TRAV13-2A0A0B4J235 113 aa12.65□□□□□ -0.38
TRAF4-201ENST00000262395 SLPIP03973 132 aa12.65□□□□□ -0.38
TRAF4-201ENST00000262395 OR13C6PQ8NH95 151 aa12.65□□□□□ -0.38
TRAF4-201ENST00000262395 TRGV4A0A0C4DH28 118 aa12.65□□□□□ -0.38
TRAF4-201ENST00000262395 DNAL4O96015 105 aa12.65□□□□□ -0.39
TRAF4-201ENST00000262395 CCL18P55774 89 aa12.65□□□□□ -0.39
TRAF4-201ENST00000262395 FAM19A5Q7Z5A7 132 aaPredicted RBP12.65□□□□□ -0.39
TRAF4-201ENST00000262395 RPL28P46779 137 aaKnown RBP12.64□□□□□ -0.39
TRAF4-201ENST00000262395 MTORP42345 2549 aa12.64□□□□□ -0.39
TRAF4-201ENST00000262395 CCL24O00175 119 aa12.64□□□□□ -0.39
TRAF4-201ENST00000262395 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-201ENST00000262395 LINC00526Q96FQ7 95 aa12.64□□□□□ -0.39
TRAF4-201ENST00000262395 ITPR3Q14573 2671 aa12.64□□□□□ -0.39
TRAF4-201ENST00000262395 SDIM1Q6ZPB5 146 aa12.63□□□□□ -0.39
TRAF4-201ENST00000262395 PAX4O43316 350 aa12.63□□□□□ -0.39
TRAF4-201ENST00000262395 LECT2O14960 151 aa12.62□□□□□ -0.39
TRAF4-201ENST00000262395 ACANP16112 2415 aa12.62□□□□□ -0.39
TRAF4-201ENST00000262395 PLAC8L1A1L4L8 177 aa12.61□□□□□ -0.39
TRAF4-201ENST00000262395 IGKV3D-7A0A0C4DH55 119 aa12.61□□□□□ -0.39
TRAF4-201ENST00000262395 hADV29S1A0JD25 119 aa12.61□□□□□ -0.39
TRAF4-201ENST00000262395 J3KT08 172 aa12.61□□□□□ -0.39
TRAF4-201ENST00000262395 GCN1Q92616 2671 aaKnown RBP12.61□□□□□ -0.39
TRAF4-201ENST00000262395 CLPSL2Q6UWE3 100 aa12.61□□□□□ -0.39
TRAF4-201ENST00000262395 NCR3O14931 201 aa12.6□□□□□ -0.39
TRAF4-201ENST00000262395 INAFM2P0DMQ5 153 aa12.6□□□□□ -0.39
TRAF4-201ENST00000262395 FLNAP21333 2647 aaKnown RBP12.6□□□□□ -0.39
TRAF4-201ENST00000262395 APCP25054 2843 aa12.6□□□□□ -0.39
TRAF4-201ENST00000262395 SMIM9A6NGZ8 99 aa12.59□□□□□ -0.39
TRAF4-201ENST00000262395 C5orf47Q569G3 176 aa12.59□□□□□ -0.39
TRAF4-201ENST00000262395 COX7CP15954 63 aa12.59□□□□□ -0.39
TRAF4-201ENST00000262395 FAM222AQ5U5X8 452 aa12.58□□□□□ -0.39
TRAF4-201ENST00000262395 IGHV3OR16-9A0A0B4J2B5 98 aa12.58□□□□□ -0.4
TRAF4-201ENST00000262395 DEFB130BP0DP73 79 aa12.58□□□□□ -0.4
TRAF4-201ENST00000262395 DEFB130AP0DP74 79 aa12.58□□□□□ -0.4
TRAF4-201ENST00000262395 PF4P02776 101 aa12.57□□□□□ -0.4
TRAF4-201ENST00000262395 XCL1P47992 114 aa12.57□□□□□ -0.4
TRAF4-201ENST00000262395 CYSTM1Q9H1C7 97 aa12.57□□□□□ -0.4
TRAF4-201ENST00000262395 A0A096LPF7 62 aa12.57□□□□□ -0.4
TRAF4-201ENST00000262395 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms