RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 A8MTW9 85 aa13.69□□□□□ -0.22
COL4A3BP-201ENST00000261415 SMCR5Q8TEV8 140 aa13.69□□□□□ -0.22
COL4A3BP-201ENST00000261415 WFDC10AQ9H1F0 79 aa13.69□□□□□ -0.22
COL4A3BP-201ENST00000261415 RBMY1BA6NDE4 496 aaKnown RBP13.67□□□□□ -0.22
COL4A3BP-201ENST00000261415 RBMY1EA6NEQ0 496 aaKnown RBP13.67□□□□□ -0.22
COL4A3BP-201ENST00000261415 KLLNB2CW77 178 aa13.67□□□□□ -0.22
COL4A3BP-201ENST00000261415 RBMY1DP0C7P1 496 aaKnown RBP13.67□□□□□ -0.22
COL4A3BP-201ENST00000261415 C4orf26Q17RF5 130 aa13.66□□□□□ -0.22
COL4A3BP-201ENST00000261415 SPINK13Q1W4C9 94 aa13.66□□□□□ -0.22
COL4A3BP-201ENST00000261415 STHQ8IWL8 128 aa13.66□□□□□ -0.22
COL4A3BP-201ENST00000261415 OXLD1Q5BKU9 147 aa13.66□□□□□ -0.22
COL4A3BP-201ENST00000261415 CLEC2BQ92478 149 aa13.66□□□□□ -0.22
COL4A3BP-201ENST00000261415 A0A0J9YXY3 114 aa13.65□□□□□ -0.22
COL4A3BP-201ENST00000261415 RNASE4P34096 147 aaKnown RBP13.65□□□□□ -0.22
COL4A3BP-201ENST00000261415 TRAV8-3A0A0A6YYJ7 113 aa13.65□□□□□ -0.22
COL4A3BP-201ENST00000261415 HRCT1Q6UXD1 115 aa13.65□□□□□ -0.22
COL4A3BP-201ENST00000261415 TRAV12-2A0A075B6T6 113 aa13.64□□□□□ -0.23
COL4A3BP-201ENST00000261415 Q5XG85 94 aa13.64□□□□□ -0.23
COL4A3BP-201ENST00000261415 F8WDY8 70 aa13.64□□□□□ -0.23
COL4A3BP-201ENST00000261415 MGPP08493 103 aa13.64□□□□□ -0.23
COL4A3BP-201ENST00000261415 TRAV21A0A0B4J279 112 aa13.63□□□□□ -0.23
COL4A3BP-201ENST00000261415 I3L3M4 83 aa13.63□□□□□ -0.23
COL4A3BP-201ENST00000261415 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
COL4A3BP-201ENST00000261415 VCYO14598 125 aa13.62□□□□□ -0.23
COL4A3BP-201ENST00000261415 RPL18AQ02543 176 aaKnown RBP13.62□□□□□ -0.23
COL4A3BP-201ENST00000261415 TRAV12-3A0A0B4J271 114 aa13.61□□□□□ -0.23
COL4A3BP-201ENST00000261415 PRSS2P07478 247 aa13.61□□□□□ -0.23
COL4A3BP-201ENST00000261415 MED14OSP0DP75 135 aa13.61□□□□□ -0.23
COL4A3BP-201ENST00000261415 DAND5Q8N907 189 aa13.61□□□□□ -0.23
COL4A3BP-201ENST00000261415 TRAV13-1A0A0B4J241 112 aa13.61□□□□□ -0.23
COL4A3BP-201ENST00000261415 SERP2Q8N6R1 65 aa13.61□□□□□ -0.23
COL4A3BP-201ENST00000261415 PHLDA3Q9Y5J5 127 aa13.61□□□□□ -0.23
COL4A3BP-201ENST00000261415 S100A4P26447 101 aaKnown RBP13.6□□□□□ -0.23
COL4A3BP-201ENST00000261415 POLR2KP53803 58 aaKnown RBP13.6□□□□□ -0.23
COL4A3BP-201ENST00000261415 SPRY2O43597 315 aa13.59□□□□□ -0.23
COL4A3BP-201ENST00000261415 LITAFQ99732 161 aa13.59□□□□□ -0.23
COL4A3BP-201ENST00000261415 MALP21145 153 aa13.59□□□□□ -0.23
COL4A3BP-201ENST00000261415 RPL39P62891 51 aaKnown RBP13.59□□□□□ -0.23
COL4A3BP-201ENST00000261415 EGFEM1PQ0D2K5 195 aa13.59□□□□□ -0.23
COL4A3BP-201ENST00000261415 RHOHQ15669 191 aa13.59□□□□□ -0.23
COL4A3BP-201ENST00000261415 JPT2Q9H910 190 aa13.59□□□□□ -0.23
COL4A3BP-201ENST00000261415 PRO0628Q9UI54 55 aa13.59□□□□□ -0.23
COL4A3BP-201ENST00000261415 RBMY1A1P0DJD3 496 aaKnown RBP13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 RBMY1CP0DJD4 496 aa13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 INAFM2P0DMQ5 153 aa13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 RPL35AP18077 110 aaKnown RBP13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 RBMY1FQ15415 496 aaKnown RBP13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 DSCR8Q96T75 97 aa13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 OXTP01178 125 aa13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 KRTAP10-11P60412 298 aa13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 MIAQ16674 131 aa13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 UPK3BQ9BT76 320 aa13.57□□□□□ -0.24
COL4A3BP-201ENST00000261415 XCL2Q9UBD3 114 aa13.56□□□□□ -0.24
COL4A3BP-201ENST00000261415 PYGO1Q9Y3Y4 419 aa13.56□□□□□ -0.24
COL4A3BP-201ENST00000261415 INSP01308 110 aa13.55□□□□□ -0.24
COL4A3BP-201ENST00000261415 CYSTM1Q9H1C7 97 aa13.55□□□□□ -0.24
COL4A3BP-201ENST00000261415 DNAH3Q8TD57 4116 aa13.54□□□□□ -0.24
COL4A3BP-201ENST00000261415 IGHV3-64A0A075B6Q5 118 aa13.53□□□□□ -0.24
COL4A3BP-201ENST00000261415 NDUFC2-KCTD14E9PQ53 114 aa13.53□□□□□ -0.24
COL4A3BP-201ENST00000261415 GIG44P09565 113 aaPredicted RBP13.53□□□□□ -0.24
COL4A3BP-201ENST00000261415 MUC4Q99102 2169 aa13.53□□□□□ -0.24
COL4A3BP-201ENST00000261415 IGHV3-30-3P0DP02 117 aa13.53□□□□□ -0.24
COL4A3BP-201ENST00000261415 DAZ2Q13117 558 aaKnown RBP13.53□□□□□ -0.24
COL4A3BP-201ENST00000261415 DAZ4Q86SG3 579 aaKnown RBP13.53□□□□□ -0.24
COL4A3BP-201ENST00000261415 DAZ3Q9NR90 486 aaKnown RBP13.53□□□□□ -0.24
COL4A3BP-201ENST00000261415 NOTCH1P46531 2555 aa13.53□□□□□ -0.24
COL4A3BP-201ENST00000261415 IGHV1OR15-1A0A075B7D0 117 aa13.52□□□□□ -0.24
COL4A3BP-201ENST00000261415 TRBV27A0A0K0K1C4 114 aa13.52□□□□□ -0.24
COL4A3BP-201ENST00000261415 COX7A2LO14548 114 aa13.52□□□□□ -0.25
COL4A3BP-201ENST00000261415 GNRH2O43555 120 aa13.52□□□□□ -0.25
COL4A3BP-201ENST00000261415 NBEAL1Q6ZS30 2694 aa13.51□□□□□ -0.25
COL4A3BP-201ENST00000261415 FAM222AQ5U5X8 452 aa13.51□□□□□ -0.25
COL4A3BP-201ENST00000261415 TIRAPP58753 221 aa13.5□□□□□ -0.25
COL4A3BP-201ENST00000261415 ADAMTSL4-AS1Q5T5F5 129 aa13.5□□□□□ -0.25
COL4A3BP-201ENST00000261415 C1orf158Q8N1D5 194 aa13.5□□□□□ -0.25
COL4A3BP-201ENST00000261415 MGAM2Q2M2H8 2515 aa13.49□□□□□ -0.25
COL4A3BP-201ENST00000261415 TRBV6-5A0A0K0K1A5 114 aa13.49□□□□□ -0.25
COL4A3BP-201ENST00000261415 NXPH4O95158 308 aa13.49□□□□□ -0.25
COL4A3BP-201ENST00000261415 IGHV4-30-4P0DP06 118 aa13.49□□□□□ -0.25
COL4A3BP-201ENST00000261415 KIF25-AS1Q9Y6Z4 181 aa13.49□□□□□ -0.25
COL4A3BP-201ENST00000261415 TIMM17BO60830 172 aa13.48□□□□□ -0.25
COL4A3BP-201ENST00000261415 LINC00315P59091 139 aa13.48□□□□□ -0.25
COL4A3BP-201ENST00000261415 RNASE3P12724 160 aaKnown RBP13.48□□□□□ -0.25
COL4A3BP-201ENST00000261415 HTN1P15515 57 aa13.48□□□□□ -0.25
COL4A3BP-201ENST00000261415 CSNK1G2-AS1Q8NCQ2 148 aa13.48□□□□□ -0.25
COL4A3BP-201ENST00000261415 NDUFA12Q9UI09 145 aa13.48□□□□□ -0.25
COL4A3BP-201ENST00000261415 NDUFC2O95298 119 aa13.47□□□□□ -0.25
COL4A3BP-201ENST00000261415 BAALC-AS2P0C853 105 aa13.47□□□□□ -0.25
COL4A3BP-201ENST00000261415 KRTAP21-3Q3LHN1 58 aa13.47□□□□□ -0.25
COL4A3BP-201ENST00000261415 IGHV3OR16-12A0A075B7B8 117 aa13.47□□□□□ -0.25
COL4A3BP-201ENST00000261415 IGHV3-16A0A0C4DH30 117 aa13.47□□□□□ -0.25
COL4A3BP-201ENST00000261415 A0A0J9YXV3 536 aa13.47□□□□□ -0.25
COL4A3BP-201ENST00000261415 LINC00467Q9BRT7 94 aa13.47□□□□□ -0.25
COL4A3BP-201ENST00000261415 IGHV1-58A0A0C4DH39 117 aa13.46□□□□□ -0.25
COL4A3BP-201ENST00000261415 PRM2P04554 102 aa13.46□□□□□ -0.25
COL4A3BP-201ENST00000261415 SUMO4Q6EEV6 95 aa13.46□□□□□ -0.25
COL4A3BP-201ENST00000261415 Q6JHZ5 121 aa13.46□□□□□ -0.25
COL4A3BP-201ENST00000261415 PFN2P35080 140 aa13.46□□□□□ -0.26
COL4A3BP-201ENST00000261415 APOC4P55056 127 aa13.44□□□□□ -0.26
COL4A3BP-201ENST00000261415 TINCRA0A1B0GVN0 87 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms