RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TM2D3Q9BRN9 247 aa15.49■□□□□ 0.07
SIX3-201ENST00000260653 ZNF815PA8K554 130 aa15.48■□□□□ 0.07
SIX3-201ENST00000260653 ICOSQ9Y6W8 199 aa15.48■□□□□ 0.07
SIX3-201ENST00000260653 COX6A2Q02221 97 aa15.48■□□□□ 0.07
SIX3-201ENST00000260653 HIGD1BQ9P298 99 aa15.48■□□□□ 0.07
SIX3-201ENST00000260653 CDKN2A-AS1Q9UH64 79 aa15.47■□□□□ 0.07
SIX3-201ENST00000260653 J3QQQ9 107 aa15.47■□□□□ 0.07
SIX3-201ENST00000260653 NANOS2P60321 138 aaKnown RBP15.47■□□□□ 0.07
SIX3-201ENST00000260653 GTF2H5Q6ZYL4 71 aa15.47■□□□□ 0.07
SIX3-201ENST00000260653 TRAV8-3A0A0A6YYJ7 113 aa15.46■□□□□ 0.07
SIX3-201ENST00000260653 GAGE12HA6NDE8 117 aa15.46■□□□□ 0.07
SIX3-201ENST00000260653 TIRAPP58753 221 aa15.46■□□□□ 0.06
SIX3-201ENST00000260653 HUWE1Q7Z6Z7 4374 aaKnown RBP15.45■□□□□ 0.06
SIX3-201ENST00000260653 TMEM262E9PQX1 116 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 LEPROTO15243 131 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 IGLV5-45A0A087WSX0 123 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 FAM19A3Q7Z5A8 133 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 C11orf45Q8TAV5 145 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 IGKV3OR2-268A0A0C4DH90 116 aa15.44■□□□□ 0.06
SIX3-201ENST00000260653 SPINK8P0C7L1 97 aa15.44■□□□□ 0.06
SIX3-201ENST00000260653 HERVK_113P63121 156 aa15.44■□□□□ 0.06
SIX3-201ENST00000260653 LGALS3P17931 250 aaKnown RBP15.44■□□□□ 0.06
SIX3-201ENST00000260653 PLEKHB2Q96CS7 222 aa15.44■□□□□ 0.06
SIX3-201ENST00000260653 IGHV3-30-3P0DP02 117 aa15.43■□□□□ 0.06
SIX3-201ENST00000260653 GAGE10A6NGK3 116 aa15.42■□□□□ 0.06
SIX3-201ENST00000260653 B5MCH6 92 aa15.42■□□□□ 0.06
SIX3-201ENST00000260653 IGHV1-58A0A0C4DH39 117 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 SEC11AP67812 179 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 SH2D6Q7Z4S9 175 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 ERG28Q9UKR5 140 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 A0A1B0GUV1 79 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 SCGB1D4Q6XE38 83 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 Q8N3U1 123 aa15.4■□□□□ 0.06
SIX3-201ENST00000260653 H3BRM9 83 aa15.4■□□□□ 0.06
SIX3-201ENST00000260653 DEFB131BA0A096LNP1 70 aa15.38■□□□□ 0.05
SIX3-201ENST00000260653 H3BNG1 76 aa15.38■□□□□ 0.05
SIX3-201ENST00000260653 LELP1Q5T871 98 aa15.38■□□□□ 0.05
SIX3-201ENST00000260653 GCSHP23434 173 aa15.37■□□□□ 0.05
SIX3-201ENST00000260653 CLPSL2Q6UWE3 100 aa15.36■□□□□ 0.05
SIX3-201ENST00000260653 LYPD5Q6UWN5 251 aa15.36■□□□□ 0.05
SIX3-201ENST00000260653 HIST1H4GQ99525 98 aa15.36■□□□□ 0.05
SIX3-201ENST00000260653 PPDPFQ9H3Y8 114 aa15.36■□□□□ 0.05
SIX3-201ENST00000260653 F8WDY8 70 aa15.35■□□□□ 0.05
SIX3-201ENST00000260653 COL7A1Q02388 2944 aa15.35■□□□□ 0.05
SIX3-201ENST00000260653 SMIM1B2RUZ4 78 aa15.35■□□□□ 0.05
SIX3-201ENST00000260653 FXYD2P54710 66 aa15.35■□□□□ 0.05
SIX3-201ENST00000260653 LINC00959A0A1B0GUT2 108 aa15.34■□□□□ 0.05
SIX3-201ENST00000260653 C10orf126Q8N4M7 172 aa15.34■□□□□ 0.05
SIX3-201ENST00000260653 STAB2Q8WWQ8 2551 aa15.34■□□□□ 0.05
SIX3-201ENST00000260653 CEND1Q8N111 149 aa15.34■□□□□ 0.05
SIX3-201ENST00000260653 DNHD1Q96M86 4753 aa15.33■□□□□ 0.05
SIX3-201ENST00000260653 IGLV5-39A0A0G2JS06 123 aa15.33■□□□□ 0.04
SIX3-201ENST00000260653 TAL2Q16559 108 aa15.32■□□□□ 0.04
SIX3-201ENST00000260653 LINC00269Q8N2A0 174 aa15.32■□□□□ 0.04
SIX3-201ENST00000260653 NDUFA12Q9UI09 145 aa15.32■□□□□ 0.04
SIX3-201ENST00000260653 ANGP03950 147 aaKnown RBP15.31■□□□□ 0.04
SIX3-201ENST00000260653 TM2D2Q9BX73 214 aa15.31■□□□□ 0.04
SIX3-201ENST00000260653 DNAH9Q9NYC9 4486 aa15.31■□□□□ 0.04
SIX3-201ENST00000260653 ZFAND6Q6FIF0 208 aa15.31■□□□□ 0.04
SIX3-201ENST00000260653 RPL24P83731 157 aaKnown RBP15.3■□□□□ 0.04
SIX3-201ENST00000260653 IGHV3OR16-9A0A0B4J2B5 98 aa15.3■□□□□ 0.04
SIX3-201ENST00000260653 A0A0J9YXY3 114 aa15.28■□□□□ 0.04
SIX3-201ENST00000260653 SRSF9Q13242 221 aaKnown RBP eCLIP15.28■□□□□ 0.04
SIX3-201ENST00000260653 A6NDN8 102 aa15.28■□□□□ 0.04
SIX3-201ENST00000260653 XCL1P47992 114 aa15.27■□□□□ 0.04
SIX3-201ENST00000260653 TRAV10A0A0B4J240 114 aa15.27■□□□□ 0.03
SIX3-201ENST00000260653 SS18Q15532 418 aa15.27■□□□□ 0.03
SIX3-201ENST00000260653 REG3AQ06141 175 aa15.26■□□□□ 0.03
SIX3-201ENST00000260653 SPANXB1Q9NS25 103 aaPredicted RBP15.26■□□□□ 0.03
SIX3-201ENST00000260653 ESRGQ1W209 222 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 C5orf38Q86SI9 138 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 WFDC10BQ8IUB3 73 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 ANAPC13Q9BS18 74 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 K7EP34 96 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 B9D2Q9BPU9 175 aa15.24■□□□□ 0.03
SIX3-201ENST00000260653 A0A087WZ39 114 aa15.24■□□□□ 0.03
SIX3-201ENST00000260653 NDUFA1O15239 70 aa15.24■□□□□ 0.03
SIX3-201ENST00000260653 J3QR89 54 aa15.23■□□□□ 0.03
SIX3-201ENST00000260653 NHP2Q9NX24 153 aaKnown RBP15.23■□□□□ 0.03
SIX3-201ENST00000260653 IGLV10-54A0A075B6I4 117 aa15.23■□□□□ 0.03
SIX3-201ENST00000260653 K7ERJ3 54 aa15.23■□□□□ 0.03
SIX3-201ENST00000260653 Q9H8V8 135 aa15.23■□□□□ 0.03
SIX3-201ENST00000260653 IGHV3-30P01768 117 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 IGHV3-33P01772 117 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 IGHV3-30-5P0DP03 117 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 KLK12Q9UKR0 248 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 LITAFQ99732 161 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 NAA38Q9BRA0 125 aaKnown RBP15.21■□□□□ 0.03
SIX3-201ENST00000260653 CHCHD10Q8WYQ3 142 aaPredicted RBP15.21■□□□□ 0.03
SIX3-201ENST00000260653 RAB37Q96AX2 223 aa15.2■□□□□ 0.02
SIX3-201ENST00000260653 TOMM7Q9P0U1 55 aa15.2■□□□□ 0.02
SIX3-201ENST00000260653 ZNF625Q96I27 306 aaPredicted RBP15.19■□□□□ 0.02
SIX3-201ENST00000260653 COX7B2Q8TF08 81 aa15.19■□□□□ 0.02
SIX3-201ENST00000260653 ADAMTSL4-AS1Q5T5F5 129 aa15.18■□□□□ 0.02
SIX3-201ENST00000260653 PRR34Q9NV39 138 aa15.18■□□□□ 0.02
SIX3-201ENST00000260653 SMIM13P0DJ93 91 aa15.18■□□□□ 0.02
SIX3-201ENST00000260653 CD164L2Q6UWJ8 174 aa15.17■□□□□ 0.02
SIX3-201ENST00000260653 C15orf53Q8NAA6 179 aa15.17■□□□□ 0.02
SIX3-201ENST00000260653 ENHOQ6UWT2 76 aa15.16■□□□□ 0.02
SIX3-201ENST00000260653 PRKDCP78527 4128 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms