RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TM2D3Q9BRN9 247 aa15.49■□□□□ 0.07
SIX3-201ENST00000260653 ZNF815PA8K554 130 aa15.48■□□□□ 0.07
SIX3-201ENST00000260653 ICOSQ9Y6W8 199 aa15.48■□□□□ 0.07
SIX3-201ENST00000260653 COX6A2Q02221 97 aa15.48■□□□□ 0.07
SIX3-201ENST00000260653 HIGD1BQ9P298 99 aa15.48■□□□□ 0.07
SIX3-201ENST00000260653 CDKN2A-AS1Q9UH64 79 aa15.47■□□□□ 0.07
SIX3-201ENST00000260653 J3QQQ9 107 aa15.47■□□□□ 0.07
SIX3-201ENST00000260653 NANOS2P60321 138 aaKnown RBP15.47■□□□□ 0.07
SIX3-201ENST00000260653 GTF2H5Q6ZYL4 71 aa15.47■□□□□ 0.07
SIX3-201ENST00000260653 TRAV8-3A0A0A6YYJ7 113 aa15.46■□□□□ 0.07
SIX3-201ENST00000260653 GAGE12HA6NDE8 117 aa15.46■□□□□ 0.07
SIX3-201ENST00000260653 TIRAPP58753 221 aa15.46■□□□□ 0.06
SIX3-201ENST00000260653 HUWE1Q7Z6Z7 4374 aaKnown RBP15.45■□□□□ 0.06
SIX3-201ENST00000260653 TMEM262E9PQX1 116 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 LEPROTO15243 131 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 IGLV5-45A0A087WSX0 123 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 FAM19A3Q7Z5A8 133 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 C11orf45Q8TAV5 145 aa15.45■□□□□ 0.06
SIX3-201ENST00000260653 IGKV3OR2-268A0A0C4DH90 116 aa15.44■□□□□ 0.06
SIX3-201ENST00000260653 SPINK8P0C7L1 97 aa15.44■□□□□ 0.06
SIX3-201ENST00000260653 HERVK_113P63121 156 aa15.44■□□□□ 0.06
SIX3-201ENST00000260653 LGALS3P17931 250 aaKnown RBP15.44■□□□□ 0.06
SIX3-201ENST00000260653 PLEKHB2Q96CS7 222 aa15.44■□□□□ 0.06
SIX3-201ENST00000260653 IGHV3-30-3P0DP02 117 aa15.43■□□□□ 0.06
SIX3-201ENST00000260653 GAGE10A6NGK3 116 aa15.42■□□□□ 0.06
SIX3-201ENST00000260653 B5MCH6 92 aa15.42■□□□□ 0.06
SIX3-201ENST00000260653 IGHV1-58A0A0C4DH39 117 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 SEC11AP67812 179 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 SH2D6Q7Z4S9 175 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 ERG28Q9UKR5 140 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 A0A1B0GUV1 79 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 SCGB1D4Q6XE38 83 aa15.41■□□□□ 0.06
SIX3-201ENST00000260653 Q8N3U1 123 aa15.4■□□□□ 0.06
SIX3-201ENST00000260653 H3BRM9 83 aa15.4■□□□□ 0.06
SIX3-201ENST00000260653 DEFB131BA0A096LNP1 70 aa15.38■□□□□ 0.05
SIX3-201ENST00000260653 H3BNG1 76 aa15.38■□□□□ 0.05
SIX3-201ENST00000260653 LELP1Q5T871 98 aa15.38■□□□□ 0.05
SIX3-201ENST00000260653 GCSHP23434 173 aa15.37■□□□□ 0.05
SIX3-201ENST00000260653 CLPSL2Q6UWE3 100 aa15.36■□□□□ 0.05
SIX3-201ENST00000260653 LYPD5Q6UWN5 251 aa15.36■□□□□ 0.05
SIX3-201ENST00000260653 HIST1H4GQ99525 98 aa15.36■□□□□ 0.05
SIX3-201ENST00000260653 PPDPFQ9H3Y8 114 aa15.36■□□□□ 0.05
SIX3-201ENST00000260653 F8WDY8 70 aa15.35■□□□□ 0.05
SIX3-201ENST00000260653 COL7A1Q02388 2944 aa15.35■□□□□ 0.05
SIX3-201ENST00000260653 SMIM1B2RUZ4 78 aa15.35■□□□□ 0.05
SIX3-201ENST00000260653 FXYD2P54710 66 aa15.35■□□□□ 0.05
SIX3-201ENST00000260653 LINC00959A0A1B0GUT2 108 aa15.34■□□□□ 0.05
SIX3-201ENST00000260653 C10orf126Q8N4M7 172 aa15.34■□□□□ 0.05
SIX3-201ENST00000260653 STAB2Q8WWQ8 2551 aa15.34■□□□□ 0.05
SIX3-201ENST00000260653 CEND1Q8N111 149 aa15.34■□□□□ 0.05
SIX3-201ENST00000260653 DNHD1Q96M86 4753 aa15.33■□□□□ 0.05
SIX3-201ENST00000260653 IGLV5-39A0A0G2JS06 123 aa15.33■□□□□ 0.04
SIX3-201ENST00000260653 TAL2Q16559 108 aa15.32■□□□□ 0.04
SIX3-201ENST00000260653 LINC00269Q8N2A0 174 aa15.32■□□□□ 0.04
SIX3-201ENST00000260653 NDUFA12Q9UI09 145 aa15.32■□□□□ 0.04
SIX3-201ENST00000260653 ANGP03950 147 aaKnown RBP15.31■□□□□ 0.04
SIX3-201ENST00000260653 TM2D2Q9BX73 214 aa15.31■□□□□ 0.04
SIX3-201ENST00000260653 DNAH9Q9NYC9 4486 aa15.31■□□□□ 0.04
SIX3-201ENST00000260653 ZFAND6Q6FIF0 208 aa15.31■□□□□ 0.04
SIX3-201ENST00000260653 RPL24P83731 157 aaKnown RBP15.3■□□□□ 0.04
SIX3-201ENST00000260653 IGHV3OR16-9A0A0B4J2B5 98 aa15.3■□□□□ 0.04
SIX3-201ENST00000260653 A0A0J9YXY3 114 aa15.28■□□□□ 0.04
SIX3-201ENST00000260653 SRSF9Q13242 221 aaKnown RBP eCLIP15.28■□□□□ 0.04
SIX3-201ENST00000260653 A6NDN8 102 aa15.28■□□□□ 0.04
SIX3-201ENST00000260653 XCL1P47992 114 aa15.27■□□□□ 0.04
SIX3-201ENST00000260653 TRAV10A0A0B4J240 114 aa15.27■□□□□ 0.03
SIX3-201ENST00000260653 SS18Q15532 418 aa15.27■□□□□ 0.03
SIX3-201ENST00000260653 REG3AQ06141 175 aa15.26■□□□□ 0.03
SIX3-201ENST00000260653 SPANXB1Q9NS25 103 aaPredicted RBP15.26■□□□□ 0.03
SIX3-201ENST00000260653 ESRGQ1W209 222 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 C5orf38Q86SI9 138 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 WFDC10BQ8IUB3 73 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 ANAPC13Q9BS18 74 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 K7EP34 96 aa15.25■□□□□ 0.03
SIX3-201ENST00000260653 B9D2Q9BPU9 175 aa15.24■□□□□ 0.03
SIX3-201ENST00000260653 A0A087WZ39 114 aa15.24■□□□□ 0.03
SIX3-201ENST00000260653 NDUFA1O15239 70 aa15.24■□□□□ 0.03
SIX3-201ENST00000260653 J3QR89 54 aa15.23■□□□□ 0.03
SIX3-201ENST00000260653 NHP2Q9NX24 153 aaKnown RBP15.23■□□□□ 0.03
SIX3-201ENST00000260653 IGLV10-54A0A075B6I4 117 aa15.23■□□□□ 0.03
SIX3-201ENST00000260653 K7ERJ3 54 aa15.23■□□□□ 0.03
SIX3-201ENST00000260653 Q9H8V8 135 aa15.23■□□□□ 0.03
SIX3-201ENST00000260653 IGHV3-30P01768 117 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 IGHV3-33P01772 117 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 IGHV3-30-5P0DP03 117 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 KLK12Q9UKR0 248 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 LITAFQ99732 161 aa15.22■□□□□ 0.03
SIX3-201ENST00000260653 NAA38Q9BRA0 125 aaKnown RBP15.21■□□□□ 0.03
SIX3-201ENST00000260653 CHCHD10Q8WYQ3 142 aaPredicted RBP15.21■□□□□ 0.03
SIX3-201ENST00000260653 RAB37Q96AX2 223 aa15.2■□□□□ 0.02
SIX3-201ENST00000260653 TOMM7Q9P0U1 55 aa15.2■□□□□ 0.02
SIX3-201ENST00000260653 ZNF625Q96I27 306 aaPredicted RBP15.19■□□□□ 0.02
SIX3-201ENST00000260653 COX7B2Q8TF08 81 aa15.19■□□□□ 0.02
SIX3-201ENST00000260653 ADAMTSL4-AS1Q5T5F5 129 aa15.18■□□□□ 0.02
SIX3-201ENST00000260653 PRR34Q9NV39 138 aa15.18■□□□□ 0.02
SIX3-201ENST00000260653 SMIM13P0DJ93 91 aa15.18■□□□□ 0.02
SIX3-201ENST00000260653 CD164L2Q6UWJ8 174 aa15.17■□□□□ 0.02
SIX3-201ENST00000260653 C15orf53Q8NAA6 179 aa15.17■□□□□ 0.02
SIX3-201ENST00000260653 ENHOQ6UWT2 76 aa15.16■□□□□ 0.02
SIX3-201ENST00000260653 PRKDCP78527 4128 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms