RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 GAGE12GP0CL81 117 aa12.1□□□□□ -0.47
SLC52A1-201ENST00000254853 GAGE12IP0CL82 117 aa12.1□□□□□ -0.47
SLC52A1-201ENST00000254853 WFDC10AQ9H1F0 79 aa12.1□□□□□ -0.47
SLC52A1-201ENST00000254853 TLN2Q9Y4G6 2542 aa12.1□□□□□ -0.47
SLC52A1-201ENST00000254853 ESM1Q9NQ30 184 aa12.09□□□□□ -0.47
SLC52A1-201ENST00000254853 ZNF469Q96JG9 3925 aaPredicted RBP12.09□□□□□ -0.47
SLC52A1-201ENST00000254853 TRGV2A0A075B6R0 118 aa12.08□□□□□ -0.47
SLC52A1-201ENST00000254853 MRPL23Q16540 153 aaKnown RBP12.08□□□□□ -0.47
SLC52A1-201ENST00000254853 RPL35AP18077 110 aaKnown RBP12.07□□□□□ -0.48
SLC52A1-201ENST00000254853 GAGE6Q13070 117 aa12.07□□□□□ -0.48
SLC52A1-201ENST00000254853 C16orf74Q96GX8 76 aa12.07□□□□□ -0.48
SLC52A1-201ENST00000254853 SONP18583 2426 aaKnown RBP12.06□□□□□ -0.48
SLC52A1-201ENST00000254853 PLA2G2AP14555 144 aa12.06□□□□□ -0.48
SLC52A1-201ENST00000254853 C2CD3Q4AC94 2353 aa12.06□□□□□ -0.48
SLC52A1-201ENST00000254853 UBR5O95071 2799 aaPredicted RBP12.06□□□□□ -0.48
SLC52A1-201ENST00000254853 IGKV3OR2-268A0A0C4DH90 116 aa12.06□□□□□ -0.48
SLC52A1-201ENST00000254853 FAM218AQ96MZ4 157 aa12.06□□□□□ -0.48
SLC52A1-201ENST00000254853 ZNF843Q8N446 348 aa12.05□□□□□ -0.48
SLC52A1-201ENST00000254853 COX7B2Q8TF08 81 aa12.05□□□□□ -0.48
SLC52A1-201ENST00000254853 TRACP01848 142 aa12.05□□□□□ -0.48
SLC52A1-201ENST00000254853 NOTCH3Q9UM47 2321 aa12.05□□□□□ -0.48
SLC52A1-201ENST00000254853 TRBV6-4A0A1B0GX49 114 aa12.04□□□□□ -0.48
SLC52A1-201ENST00000254853 B5MCH6 92 aa12.04□□□□□ -0.48
SLC52A1-201ENST00000254853 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
SLC52A1-201ENST00000254853 TOMM7Q9P0U1 55 aa12.04□□□□□ -0.48
SLC52A1-201ENST00000254853 TRGV4A0A0C4DH28 118 aa12.04□□□□□ -0.48
SLC52A1-201ENST00000254853 CCDC179H3BU77 68 aa12.04□□□□□ -0.48
SLC52A1-201ENST00000254853 MIR7-3HGQ8N6C7 128 aa12.04□□□□□ -0.48
SLC52A1-201ENST00000254853 CUBNO60494 3623 aa12.04□□□□□ -0.48
SLC52A1-201ENST00000254853 BAALC-AS2P0C853 105 aa12.03□□□□□ -0.48
SLC52A1-201ENST00000254853 PPDPFQ9H3Y8 114 aa12.03□□□□□ -0.48
SLC52A1-201ENST00000254853 IGLV4-60A0A075B6I1 120 aa12.03□□□□□ -0.48
SLC52A1-201ENST00000254853 C19orf73Q9NVV2 129 aa12.03□□□□□ -0.48
SLC52A1-201ENST00000254853 SS18L2Q9UHA2 77 aa12.03□□□□□ -0.48
SLC52A1-201ENST00000254853 OVOL2Q9BRP0 275 aa12.02□□□□□ -0.49
SLC52A1-201ENST00000254853 C22orf24Q9Y442 160 aa12.02□□□□□ -0.49
SLC52A1-201ENST00000254853 CMC4P56277 68 aaPredicted RBP12.01□□□□□ -0.49
SLC52A1-201ENST00000254853 HIST2H2BCQ6DN03 193 aa12.01□□□□□ -0.49
SLC52A1-201ENST00000254853 LINC00337Q8N6G1 96 aa12.01□□□□□ -0.49
SLC52A1-201ENST00000254853 CSNK1G2-AS1Q8NCQ2 148 aa12.01□□□□□ -0.49
SLC52A1-201ENST00000254853 TRAV13-2A0A0B4J235 113 aa12.01□□□□□ -0.49
SLC52A1-201ENST00000254853 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 IGKV2D-28P01615 120 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 CRPP02741 224 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 ITPR3Q14573 2671 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 JMJD1CQ15652 2540 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 TRBV7-7A0A0K0K1E9 115 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 RPL28P46779 137 aaKnown RBP12□□□□□ -0.49
SLC52A1-201ENST00000254853 FHL2Q14192 279 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 LINC01006Q8NI28 216 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 NF1P21359 2839 aa12□□□□□ -0.49
SLC52A1-201ENST00000254853 SETXQ7Z333 2677 aaKnown RBP12□□□□□ -0.49
SLC52A1-201ENST00000254853 TRBV6-8A0A0A6YYG3 113 aa11.99□□□□□ -0.49
SLC52A1-201ENST00000254853 ACYP1P07311 99 aa11.99□□□□□ -0.49
SLC52A1-201ENST00000254853 FAM222AQ5U5X8 452 aa11.99□□□□□ -0.49
SLC52A1-201ENST00000254853 Q9HAA7 133 aa11.99□□□□□ -0.49
SLC52A1-201ENST00000254853 IGLV1-51P01701 117 aa11.99□□□□□ -0.49
SLC52A1-201ENST00000254853 PF4P02776 101 aa11.99□□□□□ -0.49
SLC52A1-201ENST00000254853 LINC00158P58513 81 aa11.99□□□□□ -0.49
SLC52A1-201ENST00000254853 CHCHD5Q9BSY4 110 aa11.99□□□□□ -0.49
SLC52A1-201ENST00000254853 IGHV3OR16-9A0A0B4J2B5 98 aa11.98□□□□□ -0.49
SLC52A1-201ENST00000254853 SMCR5Q8TEV8 140 aa11.98□□□□□ -0.49
SLC52A1-201ENST00000254853 APCP25054 2843 aa11.98□□□□□ -0.49
SLC52A1-201ENST00000254853 C5orf38Q86SI9 138 aa11.97□□□□□ -0.49
SLC52A1-201ENST00000254853 NIPBLQ6KC79 2804 aaeCLIP11.96□□□□□ -0.49
SLC52A1-201ENST00000254853 CCL18P55774 89 aa11.96□□□□□ -0.49
SLC52A1-201ENST00000254853 FAM110AQ9BQ89 295 aa11.96□□□□□ -0.49
SLC52A1-201ENST00000254853 SMIM11BQ8TCY0 68 aa11.95□□□□□ -0.5
SLC52A1-201ENST00000254853 SETD2Q9BYW2 2564 aaPredicted RBP11.95□□□□□ -0.5
SLC52A1-201ENST00000254853 A0A087WZ39 114 aa11.94□□□□□ -0.5
SLC52A1-201ENST00000254853 FASNP49327 2511 aaKnown RBP11.94□□□□□ -0.5
SLC52A1-201ENST00000254853 NBPF19A0A087WUL8 3843 aa11.94□□□□□ -0.5
SLC52A1-201ENST00000254853 MALP21145 153 aa11.94□□□□□ -0.5
SLC52A1-201ENST00000254853 PFN2P35080 140 aa11.94□□□□□ -0.5
SLC52A1-201ENST00000254853 A0A087WYN8 130 aa11.93□□□□□ -0.5
SLC52A1-201ENST00000254853 C16orf95Q9H693 158 aa11.93□□□□□ -0.5
SLC52A1-201ENST00000254853 IBA57-AS1B1ANH7 110 aa11.93□□□□□ -0.5
SLC52A1-201ENST00000254853 CCDC168Q8NDH2 2452 aa11.93□□□□□ -0.5
SLC52A1-201ENST00000254853 LINC00959A0A1B0GUT2 108 aa11.92□□□□□ -0.5
SLC52A1-201ENST00000254853 RNASE1P07998 156 aaKnown RBP11.92□□□□□ -0.5
SLC52A1-201ENST00000254853 DEFB130BP0DP73 79 aa11.92□□□□□ -0.5
SLC52A1-201ENST00000254853 DEFB130AP0DP74 79 aa11.92□□□□□ -0.5
SLC52A1-201ENST00000254853 LINC00643Q86TS7 51 aa11.92□□□□□ -0.5
SLC52A1-201ENST00000254853 C11orf68Q9H3H3 251 aaKnown RBP11.91□□□□□ -0.5
SLC52A1-201ENST00000254853 FLNAP21333 2647 aaKnown RBP11.91□□□□□ -0.5
SLC52A1-201ENST00000254853 SDIM1Q6ZPB5 146 aa11.91□□□□□ -0.5
SLC52A1-201ENST00000254853 INAFM2P0DMQ5 153 aa11.9□□□□□ -0.5
SLC52A1-201ENST00000254853 KRTAP1-1Q07627 177 aa11.9□□□□□ -0.5
SLC52A1-201ENST00000254853 GAGE2AQ6NT46 116 aa11.9□□□□□ -0.5
SLC52A1-201ENST00000254853 IMUPQ9GZP8 106 aa11.9□□□□□ -0.5
SLC52A1-201ENST00000254853 FAM236AA0A1B0GUQ0 79 aa11.9□□□□□ -0.51
SLC52A1-201ENST00000254853 FAM236BA0A1B0GV22 79 aa11.9□□□□□ -0.51
SLC52A1-201ENST00000254853 PAX4O43316 350 aa11.89□□□□□ -0.51
SLC52A1-201ENST00000254853 DNAL4O96015 105 aa11.89□□□□□ -0.51
SLC52A1-201ENST00000254853 ATP5G1P05496 136 aa11.89□□□□□ -0.51
SLC52A1-201ENST00000254853 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
SLC52A1-201ENST00000254853 GYPEP15421 78 aa11.87□□□□□ -0.51
SLC52A1-201ENST00000254853 XCL1P47992 114 aa11.87□□□□□ -0.51
SLC52A1-201ENST00000254853 C6orf226Q5I0X4 101 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms