RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 UBE2D4Q9Y2X8 147 aa8.93□□□□□ -0.98
DDX39A-201ENST00000242776 RBX1P62877 108 aa8.92□□□□□ -0.98
DDX39A-201ENST00000242776 COA6Q5JTJ3 125 aaKnown RBP8.92□□□□□ -0.98
DDX39A-201ENST00000242776 CSDC2Q9Y534 153 aaKnown RBP8.92□□□□□ -0.98
DDX39A-201ENST00000242776 NPSP0C0P6 89 aa8.91□□□□□ -0.98
DDX39A-201ENST00000242776 LINC00310P59036 64 aa8.91□□□□□ -0.98
DDX39A-201ENST00000242776 PYGO1Q9Y3Y4 419 aa8.91□□□□□ -0.98
DDX39A-201ENST00000242776 RNF213Q63HN8 5207 aa8.91□□□□□ -0.98
DDX39A-201ENST00000242776 ANGP03950 147 aaKnown RBP8.9□□□□□ -0.98
DDX39A-201ENST00000242776 PMCHL1Q16048 86 aa8.9□□□□□ -0.98
DDX39A-201ENST00000242776 PAPPA-AS1Q5QFB9 102 aa8.9□□□□□ -0.98
DDX39A-201ENST00000242776 SCGB3A1Q96QR1 104 aa8.9□□□□□ -0.98
DDX39A-201ENST00000242776 TIMM17AQ99595 171 aa8.9□□□□□ -0.98
DDX39A-201ENST00000242776 CRPP02741 224 aa8.89□□□□□ -0.99
DDX39A-201ENST00000242776 Q6ZN92 141 aa8.89□□□□□ -0.99
DDX39A-201ENST00000242776 ERASQ7Z444 233 aa8.89□□□□□ -0.99
DDX39A-201ENST00000242776 TMEM141Q96I45 108 aa8.89□□□□□ -0.99
DDX39A-201ENST00000242776 LRP2P98164 4655 aa8.89□□□□□ -0.99
DDX39A-201ENST00000242776 IGLV4-60A0A075B6I1 120 aa8.89□□□□□ -0.99
DDX39A-201ENST00000242776 A0A096LNJ9 63 aa8.89□□□□□ -0.99
DDX39A-201ENST00000242776 ATP5LO75964 103 aa8.89□□□□□ -0.99
DDX39A-201ENST00000242776 MRPS36P82909 103 aaKnown RBP8.89□□□□□ -0.99
DDX39A-201ENST00000242776 FAM19A2Q8N3H0 131 aa8.89□□□□□ -0.99
DDX39A-201ENST00000242776 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.88□□□□□ -0.99
DDX39A-201ENST00000242776 NUPR1O60356 82 aa8.88□□□□□ -0.99
DDX39A-201ENST00000242776 LEPROTL1O95214 131 aa8.88□□□□□ -0.99
DDX39A-201ENST00000242776 PDZD11Q5EBL8 140 aa8.88□□□□□ -0.99
DDX39A-201ENST00000242776 Q6ZUT4 128 aa8.88□□□□□ -0.99
DDX39A-201ENST00000242776 ZNF664Q8N3J9 261 aa8.88□□□□□ -0.99
DDX39A-201ENST00000242776 CDC42SE2Q9NRR3 84 aa8.88□□□□□ -0.99
DDX39A-201ENST00000242776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.88□□□□□ -0.99
DDX39A-201ENST00000242776 IGLV4-3A0A075B6K6 122 aa8.87□□□□□ -0.99
DDX39A-201ENST00000242776 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
DDX39A-201ENST00000242776 PANO1I0J062 215 aa8.87□□□□□ -0.99
DDX39A-201ENST00000242776 ODF1Q14990 250 aa8.87□□□□□ -0.99
DDX39A-201ENST00000242776 TEX43Q6ZNM6 134 aa8.87□□□□□ -0.99
DDX39A-201ENST00000242776 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
DDX39A-201ENST00000242776 TNXBP22105 4242 aa8.87□□□□□ -0.99
DDX39A-201ENST00000242776 REG3AQ06141 175 aa8.86□□□□□ -0.99
DDX39A-201ENST00000242776 C14orf177Q52M58 125 aa8.86□□□□□ -0.99
DDX39A-201ENST00000242776 LINC00269Q8N2A0 174 aa8.86□□□□□ -0.99
DDX39A-201ENST00000242776 PACRGQ96M98 296 aaPredicted RBP8.86□□□□□ -0.99
DDX39A-201ENST00000242776 C2orf88Q9BSF0 95 aa8.86□□□□□ -0.99
DDX39A-201ENST00000242776 C1orf43Q9BWL3 253 aa8.86□□□□□ -0.99
DDX39A-201ENST00000242776 USP17L23D6RBM5 183 aa8.85□□□□□ -0.99
DDX39A-201ENST00000242776 S100A2P29034 98 aa8.85□□□□□ -0.99
DDX39A-201ENST00000242776 MIAQ16674 131 aa8.85□□□□□ -0.99
DDX39A-201ENST00000242776 VCX2Q9H322 139 aa8.85□□□□□ -0.99
DDX39A-201ENST00000242776 PRR34Q9NV39 138 aa8.85□□□□□ -0.99
DDX39A-201ENST00000242776 TMA7Q9Y2S6 64 aaKnown RBP8.85□□□□□ -0.99
DDX39A-201ENST00000242776 RNASE13Q5GAN3 156 aaKnown RBP8.84□□□□□ -0.99
DDX39A-201ENST00000242776 CLPSL2Q6UWE3 100 aa8.84□□□□□ -0.99
DDX39A-201ENST00000242776 IFI27L1Q96BM0 104 aa8.84□□□□□ -0.99
DDX39A-201ENST00000242776 IGKV3OR2-268A0A0C4DH90 116 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 IFITM10A6NMD0 228 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 CCL25O15444 150 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 PRSS1P07477 247 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 FABP4P15090 132 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 ENHOQ6UWT2 76 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 AMELXQ99217 191 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 OPRPNQ99935 248 aaPredicted RBP8.83□□□□□ -1
DDX39A-201ENST00000242776 TRAV8-4A0A0B4J246 113 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 SNRPEP62304 92 aaKnown RBP8.83□□□□□ -1
DDX39A-201ENST00000242776 PMVKQ15126 192 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 SS18Q15532 418 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 Q6ZRU5 148 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 DPH3Q96FX2 82 aa8.83□□□□□ -1
DDX39A-201ENST00000242776 C5orf52A6NGY3 159 aa8.82□□□□□ -1
DDX39A-201ENST00000242776 HIST3H2BBQ8N257 126 aa8.82□□□□□ -1
DDX39A-201ENST00000242776 FAM104AQ969W3 186 aa8.82□□□□□ -1
DDX39A-201ENST00000242776 TRAV13-1A0A0B4J241 112 aa8.81□□□□□ -1
DDX39A-201ENST00000242776 LINC00959A0A1B0GUT2 108 aa8.81□□□□□ -1
DDX39A-201ENST00000242776 LINC00173Q6ZV60 143 aa8.81□□□□□ -1
DDX39A-201ENST00000242776 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
DDX39A-201ENST00000242776 SEC11AP67812 179 aa8.8□□□□□ -1
DDX39A-201ENST00000242776 TRAV12-1A0A0B4J245 112 aa8.79□□□□□ -1
DDX39A-201ENST00000242776 UBE2D1P51668 147 aa8.79□□□□□ -1
DDX39A-201ENST00000242776 C9orf163Q8N9P6 203 aa8.79□□□□□ -1
DDX39A-201ENST00000242776 CST9LQ9H4G1 147 aa8.79□□□□□ -1
DDX39A-201ENST00000242776 IGLV10-54A0A075B6I4 117 aa8.78□□□□□ -1
DDX39A-201ENST00000242776 H0Y8G0 127 aa8.78□□□□□ -1
DDX39A-201ENST00000242776 CHTF8P0CG12 524 aa8.78□□□□□ -1
DDX39A-201ENST00000242776 ZC2HC1BQ5TFG8 222 aa8.78□□□□□ -1
DDX39A-201ENST00000242776 CHCHD10Q8WYQ3 142 aaPredicted RBP8.78□□□□□ -1
DDX39A-201ENST00000242776 SDIM1Q6ZPB5 146 aa8.77□□□□□ -1
DDX39A-201ENST00000242776 HIST1H2BLQ99880 126 aa8.77□□□□□ -1
DDX39A-201ENST00000242776 XCL1P47992 114 aa8.77□□□□□ -1.01
DDX39A-201ENST00000242776 HERVK_113P63121 156 aa8.77□□□□□ -1.01
DDX39A-201ENST00000242776 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1.01
DDX39A-201ENST00000242776 FAM19A3Q7Z5A8 133 aa8.77□□□□□ -1.01
DDX39A-201ENST00000242776 GEMIN7Q9H840 131 aaKnown RBP8.77□□□□□ -1.01
DDX39A-201ENST00000242776 CHTOPQ9Y3Y2 248 aaKnown RBP8.77□□□□□ -1.01
DDX39A-201ENST00000242776 KRTDAPP60985 99 aa8.76□□□□□ -1.01
DDX39A-201ENST00000242776 TINCRA0A1B0GVN0 87 aa8.75□□□□□ -1.01
DDX39A-201ENST00000242776 GAGE12HA6NDE8 117 aa8.75□□□□□ -1.01
DDX39A-201ENST00000242776 F8VRH5 84 aa8.75□□□□□ -1.01
DDX39A-201ENST00000242776 SYS1-DBNDD2H3BUS1 97 aa8.75□□□□□ -1.01
DDX39A-201ENST00000242776 C3orf79P0CE67 100 aa8.75□□□□□ -1.01
DDX39A-201ENST00000242776 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
DDX39A-201ENST00000242776 PET117Q6UWS5 81 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms