RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
CTSD-201ENST00000236671 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
CTSD-201ENST00000236671 TRAV8-4A0A0B4J246 113 aa11.09□□□□□ -0.63
CTSD-201ENST00000236671 HILS1P60008 231 aa11.09□□□□□ -0.63
CTSD-201ENST00000236671 CIRBPQ14011 172 aaKnown RBP11.09□□□□□ -0.63
CTSD-201ENST00000236671 TRAV25A0A0B4J276 109 aa11.08□□□□□ -0.64
CTSD-201ENST00000236671 SMIM1B2RUZ4 78 aa11.08□□□□□ -0.64
CTSD-201ENST00000236671 K7EQD1 137 aa11.08□□□□□ -0.64
CTSD-201ENST00000236671 NTM-AS1Q6ZSK4 140 aa11.08□□□□□ -0.64
CTSD-201ENST00000236671 CSDC2Q9Y534 153 aaKnown RBP11.08□□□□□ -0.64
CTSD-201ENST00000236671 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
CTSD-201ENST00000236671 TRBV10-1A0A0K0K1A3 114 aa11.08□□□□□ -0.64
CTSD-201ENST00000236671 Q6ZTI0 123 aa11.08□□□□□ -0.64
CTSD-201ENST00000236671 TEX29Q8N6K0 151 aa11.08□□□□□ -0.64
CTSD-201ENST00000236671 RPL36AP83881 106 aaKnown RBP11.07□□□□□ -0.64
CTSD-201ENST00000236671 RPL36ALQ969Q0 106 aaKnown RBP11.07□□□□□ -0.64
CTSD-201ENST00000236671 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
CTSD-201ENST00000236671 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
CTSD-201ENST00000236671 ZNF625Q96I27 306 aaPredicted RBP11.06□□□□□ -0.64
CTSD-201ENST00000236671 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
CTSD-201ENST00000236671 ANK2Q01484 3957 aa11.06□□□□□ -0.64
CTSD-201ENST00000236671 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
CTSD-201ENST00000236671 SNCGO76070 127 aa11.06□□□□□ -0.64
CTSD-201ENST00000236671 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
CTSD-201ENST00000236671 SOSTDC1Q6X4U4 206 aa11.05□□□□□ -0.64
CTSD-201ENST00000236671 TMEM86BQ8N661 226 aa11.05□□□□□ -0.64
CTSD-201ENST00000236671 F5H768 121 aa11.05□□□□□ -0.64
CTSD-201ENST00000236671 CDC42SE2Q9NRR3 84 aa11.05□□□□□ -0.64
CTSD-201ENST00000236671 A0A0U1RRA0 63 aa11.04□□□□□ -0.64
CTSD-201ENST00000236671 DEFB121Q5J5C9 76 aa11.04□□□□□ -0.64
CTSD-201ENST00000236671 ANAPC13Q9BS18 74 aa11.04□□□□□ -0.64
CTSD-201ENST00000236671 GAGE12JA6NER3 117 aa11.03□□□□□ -0.64
CTSD-201ENST00000236671 GAGE2BQ13066 116 aa11.03□□□□□ -0.64
CTSD-201ENST00000236671 GAGE4Q13068 117 aa11.03□□□□□ -0.64
CTSD-201ENST00000236671 GAGE5Q13069 117 aa11.03□□□□□ -0.64
CTSD-201ENST00000236671 KRTAP24-1Q3LI83 254 aa11.03□□□□□ -0.64
CTSD-201ENST00000236671 GAGE2EQ4V326 116 aa11.03□□□□□ -0.64
CTSD-201ENST00000236671 C11orf44Q8N8P7 122 aa11.03□□□□□ -0.64
CTSD-201ENST00000236671 GAGE2DQ9UEU5 116 aa11.03□□□□□ -0.64
CTSD-201ENST00000236671 A0A1W2PRX2 142 aa11.03□□□□□ -0.64
CTSD-201ENST00000236671 CCL24O00175 119 aa11.02□□□□□ -0.65
CTSD-201ENST00000236671 C15orf53Q8NAA6 179 aa11.02□□□□□ -0.65
CTSD-201ENST00000236671 COX7A2LO14548 114 aa11.01□□□□□ -0.65
CTSD-201ENST00000236671 RNASE1P07998 156 aaKnown RBP11.01□□□□□ -0.65
CTSD-201ENST00000236671 SHISA2Q6UWI4 295 aa11.01□□□□□ -0.65
CTSD-201ENST00000236671 COPS9Q8WXC6 57 aa11.01□□□□□ -0.65
CTSD-201ENST00000236671 NOP10Q9NPE3 64 aaKnown RBP11.01□□□□□ -0.65
CTSD-201ENST00000236671 GIG44P09565 113 aaPredicted RBP11□□□□□ -0.65
CTSD-201ENST00000236671 NHLRC4P0CG21 123 aaPredicted RBP11□□□□□ -0.65
CTSD-201ENST00000236671 MEIG1Q5JSS6 88 aa11□□□□□ -0.65
CTSD-201ENST00000236671 Q6Q795 121 aa11□□□□□ -0.65
CTSD-201ENST00000236671 FAM240AA0A1B0GVK7 77 aa11□□□□□ -0.65
CTSD-201ENST00000236671 WNK1Q9H4A3 2382 aa11□□□□□ -0.65
CTSD-201ENST00000236671 PLAC8L1A1L4L8 177 aa10.99□□□□□ -0.65
CTSD-201ENST00000236671 HERV-K104P63124 156 aa10.99□□□□□ -0.65
CTSD-201ENST00000236671 MDFIQ99750 246 aa10.99□□□□□ -0.65
CTSD-201ENST00000236671 NDUFV3P56181 108 aaKnown RBP10.99□□□□□ -0.65
CTSD-201ENST00000236671 TMEM243Q9BU79 118 aa10.99□□□□□ -0.65
CTSD-201ENST00000236671 UBE2L6O14933 153 aa10.97□□□□□ -0.65
CTSD-201ENST00000236671 PPDPFQ9H3Y8 114 aa10.97□□□□□ -0.65
CTSD-201ENST00000236671 CMYA5Q8N3K9 4069 aa10.97□□□□□ -0.65
CTSD-201ENST00000236671 LOC100131303A0A0U1RQF7 123 aa10.97□□□□□ -0.65
CTSD-201ENST00000236671 MRPL23Q16540 153 aaKnown RBP10.97□□□□□ -0.65
CTSD-201ENST00000236671 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
CTSD-201ENST00000236671 C16orf74Q96GX8 76 aa10.96□□□□□ -0.65
CTSD-201ENST00000236671 GAGE7O76087 117 aa10.96□□□□□ -0.66
CTSD-201ENST00000236671 GAGE12FP0CL80 117 aa10.96□□□□□ -0.66
CTSD-201ENST00000236671 GAGE12GP0CL81 117 aa10.96□□□□□ -0.66
CTSD-201ENST00000236671 GAGE12IP0CL82 117 aa10.96□□□□□ -0.66
CTSD-201ENST00000236671 WFDC10AQ9H1F0 79 aa10.96□□□□□ -0.66
CTSD-201ENST00000236671 LINC01006Q8NI28 216 aa10.95□□□□□ -0.66
CTSD-201ENST00000236671 TRGV2A0A075B6R0 118 aa10.94□□□□□ -0.66
CTSD-201ENST00000236671 TRBV6-4A0A1B0GX49 114 aa10.94□□□□□ -0.66
CTSD-201ENST00000236671 NOTCH3Q9UM47 2321 aa10.94□□□□□ -0.66
CTSD-201ENST00000236671 TRACP01848 142 aa10.93□□□□□ -0.66
CTSD-201ENST00000236671 KRTAP10-3P60369 221 aa10.93□□□□□ -0.66
CTSD-201ENST00000236671 COX7B2Q8TF08 81 aa10.93□□□□□ -0.66
CTSD-201ENST00000236671 C19orf73Q9NVV2 129 aa10.93□□□□□ -0.66
CTSD-201ENST00000236671 RPL35AP18077 110 aaKnown RBP10.92□□□□□ -0.66
CTSD-201ENST00000236671 CMC4P56277 68 aaPredicted RBP10.92□□□□□ -0.66
CTSD-201ENST00000236671 GAGE6Q13070 117 aa10.92□□□□□ -0.66
CTSD-201ENST00000236671 CSNK1G2-AS1Q8NCQ2 148 aa10.92□□□□□ -0.66
CTSD-201ENST00000236671 FAM218AQ96MZ4 157 aa10.92□□□□□ -0.66
CTSD-201ENST00000236671 OVOL2Q9BRP0 275 aa10.92□□□□□ -0.66
CTSD-201ENST00000236671 FAM222AQ5U5X8 452 aa10.9□□□□□ -0.66
CTSD-201ENST00000236671 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
CTSD-201ENST00000236671 FAM110AQ9BQ89 295 aa10.9□□□□□ -0.66
CTSD-201ENST00000236671 C22orf24Q9Y442 160 aa10.9□□□□□ -0.66
CTSD-201ENST00000236671 IGLV4-60A0A075B6I1 120 aa10.9□□□□□ -0.67
CTSD-201ENST00000236671 TRBV7-7A0A0K0K1E9 115 aa10.9□□□□□ -0.67
CTSD-201ENST00000236671 IGLV1-51P01701 117 aa10.9□□□□□ -0.67
CTSD-201ENST00000236671 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
CTSD-201ENST00000236671 TRGV4A0A0C4DH28 118 aa10.89□□□□□ -0.67
CTSD-201ENST00000236671 PF4P02776 101 aa10.89□□□□□ -0.67
CTSD-201ENST00000236671 RPL28P46779 137 aaKnown RBP10.89□□□□□ -0.67
CTSD-201ENST00000236671 LINC00337Q8N6G1 96 aa10.89□□□□□ -0.67
CTSD-201ENST00000236671 IGKV2-28A0A075B6P5 120 aa10.88□□□□□ -0.67
CTSD-201ENST00000236671 TRBV6-8A0A0A6YYG3 113 aa10.88□□□□□ -0.67
CTSD-201ENST00000236671 IGKV2D-28P01615 120 aa10.88□□□□□ -0.67
CTSD-201ENST00000236671 CRPP02741 224 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms