RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 PTPRBP23467 1997 aa12.54□□□□□ -0.4
SLC1A4-201ENST00000234256 LRRC75A-AS1Q8N1F1 130 aa12.53□□□□□ -0.4
SLC1A4-201ENST00000234256 SDIM1Q6ZPB5 146 aa12.53□□□□□ -0.4
SLC1A4-201ENST00000234256 UBE2D4Q9Y2X8 147 aa12.53□□□□□ -0.4
SLC1A4-201ENST00000234256 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
SLC1A4-201ENST00000234256 TRAV23DV6A0A075B6W5 121 aa12.52□□□□□ -0.4
SLC1A4-201ENST00000234256 SZT2Q5T011 3432 aa12.52□□□□□ -0.4
SLC1A4-201ENST00000234256 TRBV30A0A0K0K1B3 111 aa12.52□□□□□ -0.4
SLC1A4-201ENST00000234256 TMEM256-PLSCR3K7ERE1 68 aa12.52□□□□□ -0.4
SLC1A4-201ENST00000234256 ODF3L2Q3SX64 289 aa12.52□□□□□ -0.41
SLC1A4-201ENST00000234256 MGAQ8IWI9 3026 aa12.52□□□□□ -0.41
SLC1A4-201ENST00000234256 CRIP2P52943 208 aaPredicted RBP12.52□□□□□ -0.41
SLC1A4-201ENST00000234256 AKAP13Q12802 2813 aa12.52□□□□□ -0.41
SLC1A4-201ENST00000234256 IGKV2-24A0A0C4DH68 120 aa12.51□□□□□ -0.41
SLC1A4-201ENST00000234256 TRBV6-4A0A1B0GX49 114 aa12.51□□□□□ -0.41
SLC1A4-201ENST00000234256 CITED1Q99966 193 aa12.51□□□□□ -0.41
SLC1A4-201ENST00000234256 C6orf99Q4VX62 202 aa12.51□□□□□ -0.41
SLC1A4-201ENST00000234256 NDUFV3P56181 108 aaKnown RBP12.5□□□□□ -0.41
SLC1A4-201ENST00000234256 TSPEAR-AS2P59090 65 aa12.49□□□□□ -0.41
SLC1A4-201ENST00000234256 IBA57-AS1B1ANH7 110 aa12.49□□□□□ -0.41
SLC1A4-201ENST00000234256 VPS13AQ96RL7 3174 aa12.48□□□□□ -0.41
SLC1A4-201ENST00000234256 XGP55808 180 aa12.47□□□□□ -0.41
SLC1A4-201ENST00000234256 UFSP1Q6NVU6 142 aa12.47□□□□□ -0.41
SLC1A4-201ENST00000234256 SCXQ7RTU7 201 aa12.47□□□□□ -0.41
SLC1A4-201ENST00000234256 COX7BP24311 80 aa12.47□□□□□ -0.41
SLC1A4-201ENST00000234256 SMR3AQ99954 134 aa12.47□□□□□ -0.41
SLC1A4-201ENST00000234256 UBE2D1P51668 147 aa12.46□□□□□ -0.41
SLC1A4-201ENST00000234256 MRPS36P82909 103 aaKnown RBP12.46□□□□□ -0.41
SLC1A4-201ENST00000234256 C11orf45Q8TAV5 145 aa12.46□□□□□ -0.41
SLC1A4-201ENST00000234256 NDUFS5O43920 106 aa12.46□□□□□ -0.42
SLC1A4-201ENST00000234256 LINC00242Q5T6M2 205 aa12.46□□□□□ -0.42
SLC1A4-201ENST00000234256 IGLV4-69A0A075B6H9 119 aa12.45□□□□□ -0.42
SLC1A4-201ENST00000234256 A0A096LNI7 61 aa12.45□□□□□ -0.42
SLC1A4-201ENST00000234256 LYRM9A8MSI8 78 aa12.45□□□□□ -0.42
SLC1A4-201ENST00000234256 COX8CQ7Z4L0 72 aa12.45□□□□□ -0.42
SLC1A4-201ENST00000234256 SMIM9A6NGZ8 99 aa12.44□□□□□ -0.42
SLC1A4-201ENST00000234256 IGLV2-18A0A075B6J9 118 aa12.44□□□□□ -0.42
SLC1A4-201ENST00000234256 HIGD2AQ9BW72 106 aa12.44□□□□□ -0.42
SLC1A4-201ENST00000234256 LST1O00453 97 aa12.43□□□□□ -0.42
SLC1A4-201ENST00000234256 DEFB131BA0A096LNP1 70 aa12.43□□□□□ -0.42
SLC1A4-201ENST00000234256 LINC00694P0DN24 101 aa12.43□□□□□ -0.42
SLC1A4-201ENST00000234256 C20orf197Q8N268 126 aa12.43□□□□□ -0.42
SLC1A4-201ENST00000234256 CDC42SE2Q9NRR3 84 aa12.43□□□□□ -0.42
SLC1A4-201ENST00000234256 LINC00959A0A1B0GUT2 108 aa12.42□□□□□ -0.42
SLC1A4-201ENST00000234256 LY6G6DO95868 133 aa12.41□□□□□ -0.42
SLC1A4-201ENST00000234256 UBE2D3P61077 147 aa12.4□□□□□ -0.42
SLC1A4-201ENST00000234256 UBE2D2P62837 147 aa12.4□□□□□ -0.42
SLC1A4-201ENST00000234256 SMIM11BQ8TCY0 68 aa12.4□□□□□ -0.42
SLC1A4-201ENST00000234256 H7C423 109 aa12.4□□□□□ -0.43
SLC1A4-201ENST00000234256 ADAMTSL4-AS1Q5T5F5 129 aa12.4□□□□□ -0.43
SLC1A4-201ENST00000234256 Q6ZSN1 163 aa12.4□□□□□ -0.43
SLC1A4-201ENST00000234256 C1orf158Q8N1D5 194 aa12.39□□□□□ -0.43
SLC1A4-201ENST00000234256 CELSR3Q9NYQ7 3312 aa12.39□□□□□ -0.43
SLC1A4-201ENST00000234256 Q6ZQY7 126 aa12.39□□□□□ -0.43
SLC1A4-201ENST00000234256 TIMM17BO60830 172 aa12.38□□□□□ -0.43
SLC1A4-201ENST00000234256 COX6A2Q02221 97 aa12.38□□□□□ -0.43
SLC1A4-201ENST00000234256 ENHOQ6UWT2 76 aa12.38□□□□□ -0.43
SLC1A4-201ENST00000234256 SPATA25Q9BR10 227 aa12.38□□□□□ -0.43
SLC1A4-201ENST00000234256 UPK3BQ9BT76 320 aa12.38□□□□□ -0.43
SLC1A4-201ENST00000234256 UBE2AP49459 152 aa12.38□□□□□ -0.43
SLC1A4-201ENST00000234256 PLA2G2AP14555 144 aa12.37□□□□□ -0.43
SLC1A4-201ENST00000234256 CD164L2Q6UWJ8 174 aa12.37□□□□□ -0.43
SLC1A4-201ENST00000234256 IGLV4-60A0A075B6I1 120 aa12.36□□□□□ -0.43
SLC1A4-201ENST00000234256 SMIM1B2RUZ4 78 aa12.36□□□□□ -0.43
SLC1A4-201ENST00000234256 MIFP14174 115 aa12.36□□□□□ -0.43
SLC1A4-201ENST00000234256 OXLD1Q5BKU9 147 aa12.36□□□□□ -0.43
SLC1A4-201ENST00000234256 FREM2Q5SZK8 3169 aa12.36□□□□□ -0.43
SLC1A4-201ENST00000234256 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
SLC1A4-201ENST00000234256 IGKV2-28A0A075B6P5 120 aa12.36□□□□□ -0.43
SLC1A4-201ENST00000234256 IGKV2D-28P01615 120 aa12.36□□□□□ -0.43
SLC1A4-201ENST00000234256 CHCHD7Q9BUK0 85 aa12.36□□□□□ -0.43
SLC1A4-201ENST00000234256 HILS1P60008 231 aa12.35□□□□□ -0.43
SLC1A4-201ENST00000234256 BPY2O14599 106 aa12.35□□□□□ -0.43
SLC1A4-201ENST00000234256 C9orf116Q5BN46 136 aaPredicted RBP12.35□□□□□ -0.43
SLC1A4-201ENST00000234256 PRR3P79522 188 aaKnown RBP12.34□□□□□ -0.43
SLC1A4-201ENST00000234256 TRANK1O15050 2925 aa12.34□□□□□ -0.43
SLC1A4-201ENST00000234256 SPEGQ15772 3267 aa12.34□□□□□ -0.43
SLC1A4-201ENST00000234256 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.33□□□□□ -0.43
SLC1A4-201ENST00000234256 KPRPQ5T749 579 aaPredicted RBP12.33□□□□□ -0.43
SLC1A4-201ENST00000234256 TMEM258P61165 79 aa12.33□□□□□ -0.44
SLC1A4-201ENST00000234256 PDE6GP18545 87 aa12.33□□□□□ -0.44
SLC1A4-201ENST00000234256 SYCNQ0VAF6 134 aa12.32□□□□□ -0.44
SLC1A4-201ENST00000234256 J3KT08 172 aa12.32□□□□□ -0.44
SLC1A4-201ENST00000234256 UNQ6190/PRO20217Q6UXQ8 127 aa12.32□□□□□ -0.44
SLC1A4-201ENST00000234256 DNAH14Q0VDD8 3507 aa12.31□□□□□ -0.44
SLC1A4-201ENST00000234256 LAMA1P25391 3075 aa12.31□□□□□ -0.44
SLC1A4-201ENST00000234256 EYSQ5T1H1 3165 aa12.31□□□□□ -0.44
SLC1A4-201ENST00000234256 UQCRQO14949 82 aa12.31□□□□□ -0.44
SLC1A4-201ENST00000234256 KIF25-AS1Q9Y6Z4 181 aa12.31□□□□□ -0.44
SLC1A4-201ENST00000234256 CCKP06307 115 aa12.3□□□□□ -0.44
SLC1A4-201ENST00000234256 CFAP46Q8IYW2 2715 aa12.3□□□□□ -0.44
SLC1A4-201ENST00000234256 C3orf84H3BNL1 204 aa12.3□□□□□ -0.44
SLC1A4-201ENST00000234256 C5orf47Q569G3 176 aa12.3□□□□□ -0.44
SLC1A4-201ENST00000234256 FAM19A5Q7Z5A7 132 aaPredicted RBP12.3□□□□□ -0.44
SLC1A4-201ENST00000234256 WFDC9Q8NEX5 89 aa12.3□□□□□ -0.44
SLC1A4-201ENST00000234256 FLNAP21333 2647 aaKnown RBP12.3□□□□□ -0.44
SLC1A4-201ENST00000234256 CYSRT1A8MQ03 144 aa12.29□□□□□ -0.44
SLC1A4-201ENST00000234256 CCDC179H3BU77 68 aa12.29□□□□□ -0.44
SLC1A4-201ENST00000234256 NDUFB1O75438 58 aa12.29□□□□□ -0.44
SLC1A4-201ENST00000234256 MP68P56378 58 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms