RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 A0A087WYN8 130 aa10.08□□□□□ -0.8
HCFC2-201ENST00000229330 DEFB114Q30KQ6 69 aa10.08□□□□□ -0.8
HCFC2-201ENST00000229330 AMELXQ99217 191 aa10.08□□□□□ -0.8
HCFC2-201ENST00000229330 DEFB4AO15263 64 aa10.08□□□□□ -0.8
HCFC2-201ENST00000229330 DCANP1Q8TF63 244 aa10.08□□□□□ -0.8
HCFC2-201ENST00000229330 SMIM1B2RUZ4 78 aa10.07□□□□□ -0.8
HCFC2-201ENST00000229330 H0Y9J4 135 aa10.07□□□□□ -0.8
HCFC2-201ENST00000229330 C3orf84H3BNL1 204 aa10.07□□□□□ -0.8
HCFC2-201ENST00000229330 NTM-AS1Q6ZSK4 140 aa10.07□□□□□ -0.8
HCFC2-201ENST00000229330 CDC42SE2Q9NRR3 84 aa10.07□□□□□ -0.8
HCFC2-201ENST00000229330 XAGE1AQ9HD64 81 aa10.06□□□□□ -0.8
HCFC2-201ENST00000229330 F8W735 103 aaPredicted RBP10.06□□□□□ -0.8
HCFC2-201ENST00000229330 WNK1Q9H4A3 2382 aa10.06□□□□□ -0.8
HCFC2-201ENST00000229330 SOSTDC1Q6X4U4 206 aa10.06□□□□□ -0.8
HCFC2-201ENST00000229330 AGRNO00468 2067 aa10.06□□□□□ -0.8
HCFC2-201ENST00000229330 DEFB135Q30KP9 77 aa10.05□□□□□ -0.8
HCFC2-201ENST00000229330 DNAJC9-AS1A6NH13 148 aa10.05□□□□□ -0.8
HCFC2-201ENST00000229330 IGHV4-31P0DP07 118 aa10.05□□□□□ -0.8
HCFC2-201ENST00000229330 C1orf158Q8N1D5 194 aa10.05□□□□□ -0.8
HCFC2-201ENST00000229330 CHCHD7Q9BUK0 85 aa10.05□□□□□ -0.8
HCFC2-201ENST00000229330 LINC00959A0A1B0GUT2 108 aa10.04□□□□□ -0.8
HCFC2-201ENST00000229330 Q8N814 137 aa10.04□□□□□ -0.8
HCFC2-201ENST00000229330 CRYGAP11844 174 aa10.04□□□□□ -0.8
HCFC2-201ENST00000229330 COX6A2Q02221 97 aa10.04□□□□□ -0.8
HCFC2-201ENST00000229330 ZNF843Q8N446 348 aa10.04□□□□□ -0.8
HCFC2-201ENST00000229330 PRM2P04554 102 aa10.03□□□□□ -0.8
HCFC2-201ENST00000229330 PRR4Q16378 134 aa10.03□□□□□ -0.8
HCFC2-201ENST00000229330 LINC00846Q9NV44 126 aa10.03□□□□□ -0.8
HCFC2-201ENST00000229330 SBSPONQ8IVN8 264 aa10.03□□□□□ -0.8
HCFC2-201ENST00000229330 CDSNQ15517 529 aa10.03□□□□□ -0.8
HCFC2-201ENST00000229330 CD164L2Q6UWJ8 174 aa10.02□□□□□ -0.8
HCFC2-201ENST00000229330 COX17Q14061 63 aa10.02□□□□□ -0.81
HCFC2-201ENST00000229330 LYRM9A8MSI8 78 aa10.02□□□□□ -0.81
HCFC2-201ENST00000229330 Q6YL49 198 aa10.02□□□□□ -0.81
HCFC2-201ENST00000229330 A6NED7 52 aa10.02□□□□□ -0.81
HCFC2-201ENST00000229330 RPS28P62857 69 aaKnown RBP10.02□□□□□ -0.81
HCFC2-201ENST00000229330 HIVEP3Q5T1R4 2406 aa10.02□□□□□ -0.81
HCFC2-201ENST00000229330 UBE2AP49459 152 aa10.02□□□□□ -0.81
HCFC2-201ENST00000229330 C10orf99Q6UWK7 81 aa10.02□□□□□ -0.81
HCFC2-201ENST00000229330 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.02□□□□□ -0.81
HCFC2-201ENST00000229330 COL5A1P20908 1838 aaPredicted RBP10.01□□□□□ -0.81
HCFC2-201ENST00000229330 PRO0628Q9UI54 55 aa10.01□□□□□ -0.81
HCFC2-201ENST00000229330 WFDC10BQ8IUB3 73 aa10.01□□□□□ -0.81
HCFC2-201ENST00000229330 C2CD3Q4AC94 2353 aa10.01□□□□□ -0.81
HCFC2-201ENST00000229330 Q8IZM0 81 aa10.01□□□□□ -0.81
HCFC2-201ENST00000229330 FAM19A1Q7Z5A9 133 aa10□□□□□ -0.81
HCFC2-201ENST00000229330 FAM30AQ9NZY2 134 aa10□□□□□ -0.81
HCFC2-201ENST00000229330 LOC100131303A0A0U1RQF7 123 aa10□□□□□ -0.81
HCFC2-201ENST00000229330 IGKV4-1P06312 121 aa10□□□□□ -0.81
HCFC2-201ENST00000229330 Q8N3U1 123 aa9.99□□□□□ -0.81
HCFC2-201ENST00000229330 IGLV1-40P01703 118 aa9.99□□□□□ -0.81
HCFC2-201ENST00000229330 MRGPRG-AS1Q2M3A8 158 aa9.99□□□□□ -0.81
HCFC2-201ENST00000229330 PRYO14603 147 aa9.99□□□□□ -0.81
HCFC2-201ENST00000229330 CEP295Q9C0D2 2601 aa9.98□□□□□ -0.81
HCFC2-201ENST00000229330 LRCOL1A6NCL2 159 aa9.98□□□□□ -0.81
HCFC2-201ENST00000229330 ZNF73O43830 326 aaPredicted RBP9.98□□□□□ -0.81
HCFC2-201ENST00000229330 MYO18BQ8IUG5 2567 aa9.97□□□□□ -0.81
HCFC2-201ENST00000229330 HILS1P60008 231 aa9.97□□□□□ -0.81
HCFC2-201ENST00000229330 M0R378 163 aa9.97□□□□□ -0.81
HCFC2-201ENST00000229330 PMAIP1Q13794 54 aa9.97□□□□□ -0.81
HCFC2-201ENST00000229330 CELA1Q9UNI1 258 aa9.96□□□□□ -0.81
HCFC2-201ENST00000229330 MUC7Q8TAX7 377 aa9.96□□□□□ -0.82
HCFC2-201ENST00000229330 HIGD2AQ9BW72 106 aa9.96□□□□□ -0.82
HCFC2-201ENST00000229330 WFDC13Q8IUB5 93 aa9.96□□□□□ -0.82
HCFC2-201ENST00000229330 TET2Q6N021 2002 aaPredicted RBP9.96□□□□□ -0.82
HCFC2-201ENST00000229330 TRBV7-6A0A0J9YX20 115 aa9.95□□□□□ -0.82
HCFC2-201ENST00000229330 KIF25-AS1Q9Y6Z4 181 aa9.95□□□□□ -0.82
HCFC2-201ENST00000229330 C4orf26Q17RF5 130 aa9.95□□□□□ -0.82
HCFC2-201ENST00000229330 A0A087WZ39 114 aa9.94□□□□□ -0.82
HCFC2-201ENST00000229330 EDN2P20800 178 aa9.94□□□□□ -0.82
HCFC2-201ENST00000229330 SORL1Q92673 2214 aa9.94□□□□□ -0.82
HCFC2-201ENST00000229330 KIR2DL5BQ8NHK3 375 aa9.93□□□□□ -0.82
HCFC2-201ENST00000229330 BBC3Q96PG8 261 aaPredicted RBP9.93□□□□□ -0.82
HCFC2-201ENST00000229330 UTRNP46939 3433 aa9.93□□□□□ -0.82
HCFC2-201ENST00000229330 ABCA2Q9BZC7 2435 aa9.93□□□□□ -0.82
HCFC2-201ENST00000229330 TRBV10-3A0A0K0K1G6 114 aa9.93□□□□□ -0.82
HCFC2-201ENST00000229330 DHRS4-AS1Q9P1J3 65 aa9.93□□□□□ -0.82
HCFC2-201ENST00000229330 TMEM254Q8TBM7 123 aa9.92□□□□□ -0.82
HCFC2-201ENST00000229330 PRR3P79522 188 aaKnown RBP9.92□□□□□ -0.82
HCFC2-201ENST00000229330 ANKRD11Q6UB99 2663 aaPredicted RBP9.92□□□□□ -0.82
HCFC2-201ENST00000229330 B9D2Q9BPU9 175 aa9.91□□□□□ -0.82
HCFC2-201ENST00000229330 IGKV2-28A0A075B6P5 120 aa9.91□□□□□ -0.82
HCFC2-201ENST00000229330 IGKV2D-28P01615 120 aa9.91□□□□□ -0.82
HCFC2-201ENST00000229330 Q6ZVQ6 151 aa9.91□□□□□ -0.82
HCFC2-201ENST00000229330 LINC00337Q8N6G1 96 aa9.91□□□□□ -0.82
HCFC2-201ENST00000229330 PRRC2AP48634 2157 aaKnown RBP9.91□□□□□ -0.82
HCFC2-201ENST00000229330 SEC61GP60059 68 aa9.9□□□□□ -0.82
HCFC2-201ENST00000229330 MYO9AB2RTY4 2548 aa9.9□□□□□ -0.82
HCFC2-201ENST00000229330 LINC01547P58512 204 aaPredicted RBP9.9□□□□□ -0.82
HCFC2-201ENST00000229330 SYCNQ0VAF6 134 aa9.9□□□□□ -0.82
HCFC2-201ENST00000229330 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
HCFC2-201ENST00000229330 INAFM1C9JVW0 142 aa9.89□□□□□ -0.83
HCFC2-201ENST00000229330 EXPH5Q8NEV8 1989 aa9.89□□□□□ -0.83
HCFC2-201ENST00000229330 Q6ZSN1 163 aa9.89□□□□□ -0.83
HCFC2-201ENST00000229330 PSPHP1O15172 72 aa9.89□□□□□ -0.83
HCFC2-201ENST00000229330 CYSRT1A8MQ03 144 aa9.88□□□□□ -0.83
HCFC2-201ENST00000229330 PRR15LQ9BU68 103 aa9.88□□□□□ -0.83
HCFC2-201ENST00000229330 ZNF702PQ9H963 129 aa9.88□□□□□ -0.83
HCFC2-201ENST00000229330 A0A096LNI7 61 aa9.88□□□□□ -0.83
HCFC2-201ENST00000229330 IGKV2-24A0A0C4DH68 120 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms