RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LINC00612Q8N6U2 182 aa15.5■□□□□ 0.07
SMARCD2-201ENST00000225742 DAND5Q8N907 189 aa15.5■□□□□ 0.07
SMARCD2-201ENST00000225742 TRBV6-8A0A0A6YYG3 113 aa15.5■□□□□ 0.07
SMARCD2-201ENST00000225742 H3BT86 120 aa15.5■□□□□ 0.07
SMARCD2-201ENST00000225742 LST1O00453 97 aa15.49■□□□□ 0.07
SMARCD2-201ENST00000225742 PF4P02776 101 aa15.49■□□□□ 0.07
SMARCD2-201ENST00000225742 MEIG1Q5JSS6 88 aa15.49■□□□□ 0.07
SMARCD2-201ENST00000225742 LINC00482Q8N8I6 264 aa15.49■□□□□ 0.07
SMARCD2-201ENST00000225742 PDZD2O15018 2839 aa15.47■□□□□ 0.07
SMARCD2-201ENST00000225742 SMIM9A6NGZ8 99 aa15.47■□□□□ 0.07
SMARCD2-201ENST00000225742 GAGE6Q13070 117 aa15.47■□□□□ 0.07
SMARCD2-201ENST00000225742 KRTAP10-3P60369 221 aa15.45■□□□□ 0.06
SMARCD2-201ENST00000225742 COX7B2Q8TF08 81 aa15.45■□□□□ 0.06
SMARCD2-201ENST00000225742 NTN5Q8WTR8 489 aaPredicted RBP15.45■□□□□ 0.06
SMARCD2-201ENST00000225742 ZNF469Q96JG9 3925 aaPredicted RBP15.45■□□□□ 0.06
SMARCD2-201ENST00000225742 C2orf82Q6UX34 121 aa15.45■□□□□ 0.06
SMARCD2-201ENST00000225742 SOSTDC1Q6X4U4 206 aa15.43■□□□□ 0.06
SMARCD2-201ENST00000225742 CHCHD5Q9BSY4 110 aa15.43■□□□□ 0.06
SMARCD2-201ENST00000225742 CCDC168Q8NDH2 2452 aa15.43■□□□□ 0.06
SMARCD2-201ENST00000225742 CRLF1O75462 422 aa15.42■□□□□ 0.06
SMARCD2-201ENST00000225742 SHISA2Q6UWI4 295 aa15.42■□□□□ 0.06
SMARCD2-201ENST00000225742 UBE2WQ96B02 151 aa15.42■□□□□ 0.06
SMARCD2-201ENST00000225742 CLEC2BQ92478 149 aa15.41■□□□□ 0.06
SMARCD2-201ENST00000225742 COX7A2LO14548 114 aa15.4■□□□□ 0.06
SMARCD2-201ENST00000225742 IGLV4-60A0A075B6I1 120 aa15.4■□□□□ 0.06
SMARCD2-201ENST00000225742 A0A0U1RRA0 63 aa15.4■□□□□ 0.06
SMARCD2-201ENST00000225742 IGHV3OR16-9A0A0B4J2B5 98 aa15.39■□□□□ 0.05
SMARCD2-201ENST00000225742 XGP55808 180 aa15.39■□□□□ 0.05
SMARCD2-201ENST00000225742 A0A087WZ39 114 aa15.38■□□□□ 0.05
SMARCD2-201ENST00000225742 DEFB130BP0DP73 79 aa15.38■□□□□ 0.05
SMARCD2-201ENST00000225742 DEFB130AP0DP74 79 aa15.38■□□□□ 0.05
SMARCD2-201ENST00000225742 C9orf66Q5T8R8 295 aa15.38■□□□□ 0.05
SMARCD2-201ENST00000225742 FAM222AQ5U5X8 452 aa15.38■□□□□ 0.05
SMARCD2-201ENST00000225742 X6R8D5 127 aa15.38■□□□□ 0.05
SMARCD2-201ENST00000225742 MT-ATP8P03928 68 aa15.38■□□□□ 0.05
SMARCD2-201ENST00000225742 ANK3Q12955 4377 aaKnown RBP15.38■□□□□ 0.05
SMARCD2-201ENST00000225742 LY6G6DO95868 133 aa15.37■□□□□ 0.05
SMARCD2-201ENST00000225742 TRAV13-2A0A0B4J235 113 aa15.36■□□□□ 0.05
SMARCD2-201ENST00000225742 DEFB121Q5J5C9 76 aa15.36■□□□□ 0.05
SMARCD2-201ENST00000225742 SMR3AQ99954 134 aa15.36■□□□□ 0.05
SMARCD2-201ENST00000225742 A0A1B0GUV1 79 aa15.36■□□□□ 0.05
SMARCD2-201ENST00000225742 GYPEP15421 78 aa15.36■□□□□ 0.05
SMARCD2-201ENST00000225742 TENM4Q6N022 2769 aa15.35■□□□□ 0.05
SMARCD2-201ENST00000225742 TEX49A0A1B0GTD5 131 aa15.35■□□□□ 0.05
SMARCD2-201ENST00000225742 LYRM9A8MSI8 78 aa15.35■□□□□ 0.05
SMARCD2-201ENST00000225742 PRO0255Q9UI72 69 aa15.35■□□□□ 0.05
SMARCD2-201ENST00000225742 TRAV8-4A0A0B4J246 113 aa15.34■□□□□ 0.05
SMARCD2-201ENST00000225742 SETXQ7Z333 2677 aaKnown RBP15.34■□□□□ 0.05
SMARCD2-201ENST00000225742 LINC00959A0A1B0GUT2 108 aa15.33■□□□□ 0.05
SMARCD2-201ENST00000225742 A0A1B0GV72 72 aa15.33■□□□□ 0.05
SMARCD2-201ENST00000225742 IBA57-AS1B1ANH7 110 aa15.33■□□□□ 0.05
SMARCD2-201ENST00000225742 LINC01561Q8N1V8 128 aa15.33■□□□□ 0.05
SMARCD2-201ENST00000225742 NF1P21359 2839 aa15.33■□□□□ 0.04
SMARCD2-201ENST00000225742 IGKV3OR2-268A0A0C4DH90 116 aa15.33■□□□□ 0.04
SMARCD2-201ENST00000225742 TRACP01848 142 aa15.33■□□□□ 0.04
SMARCD2-201ENST00000225742 TOMM7Q9P0U1 55 aa15.33■□□□□ 0.04
SMARCD2-201ENST00000225742 NBPF19A0A087WUL8 3843 aa15.33■□□□□ 0.04
SMARCD2-201ENST00000225742 ACANP16112 2415 aa15.32■□□□□ 0.04
SMARCD2-201ENST00000225742 NOTCH3Q9UM47 2321 aa15.32■□□□□ 0.04
SMARCD2-201ENST00000225742 MIR7-3HGQ8N6C7 128 aa15.31■□□□□ 0.04
SMARCD2-201ENST00000225742 SS18Q15532 418 aa15.31■□□□□ 0.04
SMARCD2-201ENST00000225742 CRPP02741 224 aa15.29■□□□□ 0.04
SMARCD2-201ENST00000225742 RPL28P46779 137 aaKnown RBP15.29■□□□□ 0.04
SMARCD2-201ENST00000225742 FAM240AA0A1B0GVK7 77 aa15.29■□□□□ 0.04
SMARCD2-201ENST00000225742 LINC00158P58513 81 aa15.29■□□□□ 0.04
SMARCD2-201ENST00000225742 SND1-IT1Q9HBX3 110 aa15.29■□□□□ 0.04
SMARCD2-201ENST00000225742 APOC4P55056 127 aa15.28■□□□□ 0.04
SMARCD2-201ENST00000225742 TRAV26-1A0A087WT03 109 aa15.27■□□□□ 0.04
SMARCD2-201ENST00000225742 MRPL23Q16540 153 aaKnown RBP15.27■□□□□ 0.04
SMARCD2-201ENST00000225742 C5orf38Q86SI9 138 aa15.27■□□□□ 0.04
SMARCD2-201ENST00000225742 JMJD1CQ15652 2540 aa15.27■□□□□ 0.04
SMARCD2-201ENST00000225742 PAX4O43316 350 aa15.27■□□□□ 0.03
SMARCD2-201ENST00000225742 CKS1BP61024 79 aa15.27■□□□□ 0.03
SMARCD2-201ENST00000225742 CITED1Q99966 193 aa15.27■□□□□ 0.03
SMARCD2-201ENST00000225742 HIVEP2P31629 2446 aa15.25■□□□□ 0.03
SMARCD2-201ENST00000225742 MTORP42345 2549 aa15.24■□□□□ 0.03
SMARCD2-201ENST00000225742 SNCGO76070 127 aa15.24■□□□□ 0.03
SMARCD2-201ENST00000225742 CCL18P55774 89 aa15.24■□□□□ 0.03
SMARCD2-201ENST00000225742 Q8IZM0 81 aa15.24■□□□□ 0.03
SMARCD2-201ENST00000225742 IGKV2-28A0A075B6P5 120 aa15.23■□□□□ 0.03
SMARCD2-201ENST00000225742 IGKV2D-28P01615 120 aa15.23■□□□□ 0.03
SMARCD2-201ENST00000225742 C6orf226Q5I0X4 101 aa15.23■□□□□ 0.03
SMARCD2-201ENST00000225742 LINC00337Q8N6G1 96 aa15.22■□□□□ 0.03
SMARCD2-201ENST00000225742 SETD2Q9BYW2 2564 aaPredicted RBP15.22■□□□□ 0.03
SMARCD2-201ENST00000225742 Q6Q795 121 aa15.21■□□□□ 0.03
SMARCD2-201ENST00000225742 KMT2BQ9UMN6 2715 aaPredicted RBP15.2■□□□□ 0.02
SMARCD2-201ENST00000225742 ACYP1P07311 99 aa15.2■□□□□ 0.02
SMARCD2-201ENST00000225742 XCL1P47992 114 aa15.2■□□□□ 0.02
SMARCD2-201ENST00000225742 C2CD3Q4AC94 2353 aa15.19■□□□□ 0.02
SMARCD2-201ENST00000225742 UNC79Q9P2D8 2635 aa15.19■□□□□ 0.02
SMARCD2-201ENST00000225742 INAFM1C9JVW0 142 aa15.19■□□□□ 0.02
SMARCD2-201ENST00000225742 H0YGX0 51 aa15.19■□□□□ 0.02
SMARCD2-201ENST00000225742 BAALC-AS2P0C853 105 aa15.19■□□□□ 0.02
SMARCD2-201ENST00000225742 ITPR2Q14571 2701 aa15.18■□□□□ 0.02
SMARCD2-201ENST00000225742 MIFP14174 115 aa15.18■□□□□ 0.02
SMARCD2-201ENST00000225742 DAD1P61803 113 aa15.18■□□□□ 0.02
SMARCD2-201ENST00000225742 DEFB135Q30KP9 77 aa15.18■□□□□ 0.02
SMARCD2-201ENST00000225742 IGHV4-28A0A0C4DH34 117 aa15.17■□□□□ 0.02
SMARCD2-201ENST00000225742 GAGE2BQ13066 116 aa15.17■□□□□ 0.02
SMARCD2-201ENST00000225742 GAGE2EQ4V326 116 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms