RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TRBV30A0A0K0K1B3 111 aa10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 LINC00308Q8TCZ7 52 aa10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 RNASE1P07998 156 aaKnown RBP10.74□□□□□ -0.69
UBE2D4-201ENST00000222402 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
UBE2D4-201ENST00000222402 COX7B2Q8TF08 81 aa10.74□□□□□ -0.69
UBE2D4-201ENST00000222402 DEFB4AO15263 64 aa10.74□□□□□ -0.69
UBE2D4-201ENST00000222402 MIR7-3HGQ8N6C7 128 aa10.73□□□□□ -0.69
UBE2D4-201ENST00000222402 PLA2G2AP14555 144 aa10.72□□□□□ -0.69
UBE2D4-201ENST00000222402 EDA2RQ9HAV5 297 aa10.72□□□□□ -0.69
UBE2D4-201ENST00000222402 SND1-IT1Q9HBX3 110 aa10.72□□□□□ -0.69
UBE2D4-201ENST00000222402 CDC42SE2Q9NRR3 84 aa10.72□□□□□ -0.69
UBE2D4-201ENST00000222402 C15orf53Q8NAA6 179 aa10.71□□□□□ -0.69
UBE2D4-201ENST00000222402 TRAV13-2A0A0B4J235 113 aa10.71□□□□□ -0.7
UBE2D4-201ENST00000222402 DAD1P61803 113 aa10.7□□□□□ -0.7
UBE2D4-201ENST00000222402 TRBV6-4A0A1B0GX49 114 aa10.7□□□□□ -0.7
UBE2D4-201ENST00000222402 F5H768 121 aa10.7□□□□□ -0.7
UBE2D4-201ENST00000222402 SMR3AQ99954 134 aa10.7□□□□□ -0.7
UBE2D4-201ENST00000222402 H3BT86 120 aa10.7□□□□□ -0.7
UBE2D4-201ENST00000222402 SMIM1B2RUZ4 78 aa10.69□□□□□ -0.7
UBE2D4-201ENST00000222402 TIMM17BO60830 172 aa10.69□□□□□ -0.7
UBE2D4-201ENST00000222402 DEFB135Q30KP9 77 aa10.69□□□□□ -0.7
UBE2D4-201ENST00000222402 ANGP03950 147 aaKnown RBP10.69□□□□□ -0.7
UBE2D4-201ENST00000222402 XGP55808 180 aa10.69□□□□□ -0.7
UBE2D4-201ENST00000222402 IGLV10-54A0A075B6I4 117 aa10.68□□□□□ -0.7
UBE2D4-201ENST00000222402 TRBV6-8A0A0A6YYG3 113 aa10.68□□□□□ -0.7
UBE2D4-201ENST00000222402 IGLV1-51P01701 117 aa10.68□□□□□ -0.7
UBE2D4-201ENST00000222402 BAALC-AS2P0C853 105 aa10.68□□□□□ -0.7
UBE2D4-201ENST00000222402 A8MTW9 85 aa10.68□□□□□ -0.7
UBE2D4-201ENST00000222402 NTM-AS1Q6ZSK4 140 aa10.68□□□□□ -0.7
UBE2D4-201ENST00000222402 CELSR2Q9HCU4 2923 aa10.68□□□□□ -0.7
UBE2D4-201ENST00000222402 HELZ2Q9BYK8 2649 aaKnown RBP10.68□□□□□ -0.7
UBE2D4-201ENST00000222402 FHL3Q13643 280 aa10.67□□□□□ -0.7
UBE2D4-201ENST00000222402 LINC00482Q8N8I6 264 aa10.67□□□□□ -0.7
UBE2D4-201ENST00000222402 GAGE2AQ6NT46 116 aa10.66□□□□□ -0.7
UBE2D4-201ENST00000222402 HILS1P60008 231 aa10.66□□□□□ -0.7
UBE2D4-201ENST00000222402 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
UBE2D4-201ENST00000222402 CR1P17927 2039 aa10.65□□□□□ -0.7
UBE2D4-201ENST00000222402 COX7A2LO14548 114 aa10.65□□□□□ -0.7
UBE2D4-201ENST00000222402 H7C423 109 aa10.65□□□□□ -0.71
UBE2D4-201ENST00000222402 LST1O00453 97 aa10.65□□□□□ -0.71
UBE2D4-201ENST00000222402 PRO0255Q9UI72 69 aa10.65□□□□□ -0.71
UBE2D4-201ENST00000222402 FAM222AQ5U5X8 452 aa10.64□□□□□ -0.71
UBE2D4-201ENST00000222402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.64□□□□□ -0.71
UBE2D4-201ENST00000222402 MXRA5Q9NR99 2828 aa10.64□□□□□ -0.71
UBE2D4-201ENST00000222402 Q9HAA7 133 aa10.64□□□□□ -0.71
UBE2D4-201ENST00000222402 NF1P21359 2839 aa10.64□□□□□ -0.71
UBE2D4-201ENST00000222402 IGLV4-60A0A075B6I1 120 aa10.64□□□□□ -0.71
UBE2D4-201ENST00000222402 APOC4P55056 127 aa10.63□□□□□ -0.71
UBE2D4-201ENST00000222402 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
UBE2D4-201ENST00000222402 CSDC2Q9Y534 153 aaKnown RBP10.63□□□□□ -0.71
UBE2D4-201ENST00000222402 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
UBE2D4-201ENST00000222402 LITAFQ99732 161 aa10.62□□□□□ -0.71
UBE2D4-201ENST00000222402 CDIP1Q9H305 208 aa10.62□□□□□ -0.71
UBE2D4-201ENST00000222402 OVOL2Q9BRP0 275 aa10.62□□□□□ -0.71
UBE2D4-201ENST00000222402 FBN2P35556 2912 aa10.62□□□□□ -0.71
UBE2D4-201ENST00000222402 INAFM2P0DMQ5 153 aa10.61□□□□□ -0.71
UBE2D4-201ENST00000222402 FHL2Q14192 279 aa10.6□□□□□ -0.71
UBE2D4-201ENST00000222402 IGLV5-39A0A0G2JS06 123 aa10.6□□□□□ -0.71
UBE2D4-201ENST00000222402 KRTAP1-3Q8IUG1 177 aa10.6□□□□□ -0.71
UBE2D4-201ENST00000222402 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
UBE2D4-201ENST00000222402 C16orf95Q9H693 158 aa10.59□□□□□ -0.71
UBE2D4-201ENST00000222402 INAFM1C9JVW0 142 aa10.59□□□□□ -0.71
UBE2D4-201ENST00000222402 IGLV5-45A0A087WSX0 123 aa10.59□□□□□ -0.71
UBE2D4-201ENST00000222402 ATP5G1P05496 136 aa10.58□□□□□ -0.71
UBE2D4-201ENST00000222402 LINC00269Q8N2A0 174 aa10.58□□□□□ -0.71
UBE2D4-201ENST00000222402 GCN1Q92616 2671 aaKnown RBP10.58□□□□□ -0.72
UBE2D4-201ENST00000222402 LINC00959A0A1B0GUT2 108 aa10.58□□□□□ -0.72
UBE2D4-201ENST00000222402 LY6G6DO95868 133 aa10.58□□□□□ -0.72
UBE2D4-201ENST00000222402 LECT2O14960 151 aa10.57□□□□□ -0.72
UBE2D4-201ENST00000222402 ATRQ13535 2644 aa10.57□□□□□ -0.72
UBE2D4-201ENST00000222402 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
UBE2D4-201ENST00000222402 APCP25054 2843 aa10.57□□□□□ -0.72
UBE2D4-201ENST00000222402 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
UBE2D4-201ENST00000222402 SBSPONQ8IVN8 264 aa10.56□□□□□ -0.72
UBE2D4-201ENST00000222402 RNF183Q96D59 192 aa10.56□□□□□ -0.72
UBE2D4-201ENST00000222402 IBA57-AS1B1ANH7 110 aa10.56□□□□□ -0.72
UBE2D4-201ENST00000222402 NBEAL2Q6ZNJ1 2754 aa10.55□□□□□ -0.72
UBE2D4-201ENST00000222402 H0YGX0 51 aa10.55□□□□□ -0.72
UBE2D4-201ENST00000222402 SOSTDC1Q6X4U4 206 aa10.55□□□□□ -0.72
UBE2D4-201ENST00000222402 FAM110AQ9BQ89 295 aa10.55□□□□□ -0.72
UBE2D4-201ENST00000222402 SETXQ7Z333 2677 aaKnown RBP10.54□□□□□ -0.72
UBE2D4-201ENST00000222402 FLNBO75369 2602 aaKnown RBP10.54□□□□□ -0.72
UBE2D4-201ENST00000222402 SPART-AS1P0CW21 52 aa10.54□□□□□ -0.72
UBE2D4-201ENST00000222402 CCL18P55774 89 aa10.54□□□□□ -0.72
UBE2D4-201ENST00000222402 ITPR2Q14571 2701 aa10.54□□□□□ -0.72
UBE2D4-201ENST00000222402 SMIM9A6NGZ8 99 aa10.54□□□□□ -0.72
UBE2D4-201ENST00000222402 MRPL23Q16540 153 aaKnown RBP10.54□□□□□ -0.72
UBE2D4-201ENST00000222402 TRACP01848 142 aa10.53□□□□□ -0.72
UBE2D4-201ENST00000222402 GIG44P09565 113 aaPredicted RBP10.53□□□□□ -0.72
UBE2D4-201ENST00000222402 B5MCH6 92 aa10.52□□□□□ -0.72
UBE2D4-201ENST00000222402 UNC79Q9P2D8 2635 aa10.52□□□□□ -0.72
UBE2D4-201ENST00000222402 KLK12Q9UKR0 248 aa10.52□□□□□ -0.72
UBE2D4-201ENST00000222402 LYRM9A8MSI8 78 aa10.52□□□□□ -0.73
UBE2D4-201ENST00000222402 CHCHD10Q8WYQ3 142 aaPredicted RBP10.52□□□□□ -0.73
UBE2D4-201ENST00000222402 ACYP1P07311 99 aa10.52□□□□□ -0.73
UBE2D4-201ENST00000222402 REG3AQ06141 175 aa10.52□□□□□ -0.73
UBE2D4-201ENST00000222402 A0A087WZ39 114 aa10.51□□□□□ -0.73
UBE2D4-201ENST00000222402 KIR2DL5BQ8NHK3 375 aa10.51□□□□□ -0.73
UBE2D4-201ENST00000222402 SMIM11BQ8TCY0 68 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms