RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 USF3Q68DE3 2245 aa7.98□□□□□ -1.13
KNOP1-201ENST00000219837 IGLV4-60A0A075B6I1 120 aa7.98□□□□□ -1.13
KNOP1-201ENST00000219837 POLR2KP53803 58 aaKnown RBP7.97□□□□□ -1.13
KNOP1-201ENST00000219837 ODF3L2Q3SX64 289 aa7.97□□□□□ -1.13
KNOP1-201ENST00000219837 GTF3C1Q12789 2109 aa7.97□□□□□ -1.13
KNOP1-201ENST00000219837 EGFEM1PQ0D2K5 195 aa7.97□□□□□ -1.13
KNOP1-201ENST00000219837 CACNA1EQ15878 2313 aa7.96□□□□□ -1.13
KNOP1-201ENST00000219837 IGLV1-51P01701 117 aa7.96□□□□□ -1.13
KNOP1-201ENST00000219837 MUC7Q8TAX7 377 aa7.96□□□□□ -1.13
KNOP1-201ENST00000219837 PCNX3Q9H6A9 2034 aa7.96□□□□□ -1.13
KNOP1-201ENST00000219837 COL6A6A6NMZ7 2263 aa7.96□□□□□ -1.14
KNOP1-201ENST00000219837 TANC2Q9HCD6 1990 aa7.95□□□□□ -1.14
KNOP1-201ENST00000219837 SPINK1P00995 79 aa7.95□□□□□ -1.14
KNOP1-201ENST00000219837 C2orf91Q6ZV80 131 aa7.95□□□□□ -1.14
KNOP1-201ENST00000219837 MED13Q9UHV7 2174 aa7.95□□□□□ -1.14
KNOP1-201ENST00000219837 CACNA1BQ00975 2339 aa7.95□□□□□ -1.14
KNOP1-201ENST00000219837 LINC00694P0DN24 101 aa7.95□□□□□ -1.14
KNOP1-201ENST00000219837 DEFB116Q30KQ4 102 aa7.95□□□□□ -1.14
KNOP1-201ENST00000219837 TPRP12270 2363 aaKnown RBP7.95□□□□□ -1.14
KNOP1-201ENST00000219837 LINC00242Q5T6M2 205 aa7.94□□□□□ -1.14
KNOP1-201ENST00000219837 Q6JHZ5 121 aa7.94□□□□□ -1.14
KNOP1-201ENST00000219837 TRBV7-6A0A0J9YX20 115 aa7.94□□□□□ -1.14
KNOP1-201ENST00000219837 PCOTHQ58A44 107 aa7.93□□□□□ -1.14
KNOP1-201ENST00000219837 PTPRSQ13332 1948 aa7.93□□□□□ -1.14
KNOP1-201ENST00000219837 IGIPA6NJ69 53 aa7.93□□□□□ -1.14
KNOP1-201ENST00000219837 CCDC179H3BU77 68 aa7.93□□□□□ -1.14
KNOP1-201ENST00000219837 LYPD5Q6UWN5 251 aa7.93□□□□□ -1.14
KNOP1-201ENST00000219837 SBSPONQ8IVN8 264 aa7.93□□□□□ -1.14
KNOP1-201ENST00000219837 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
KNOP1-201ENST00000219837 NTM-AS1Q6ZSK4 140 aa7.92□□□□□ -1.14
KNOP1-201ENST00000219837 LINC00208Q96KT6 92 aa7.92□□□□□ -1.14
KNOP1-201ENST00000219837 RP1L1Q8IWN7 2480 aaPredicted RBP7.92□□□□□ -1.14
KNOP1-201ENST00000219837 Q6ZSN1 163 aa7.92□□□□□ -1.14
KNOP1-201ENST00000219837 YPEL4Q96NS1 127 aa7.92□□□□□ -1.14
KNOP1-201ENST00000219837 ZDBF2Q9HCK1 2354 aa7.91□□□□□ -1.14
KNOP1-201ENST00000219837 PCDH15Q96QU1 1955 aa7.91□□□□□ -1.14
KNOP1-201ENST00000219837 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
KNOP1-201ENST00000219837 DSCAMO60469 2012 aa7.91□□□□□ -1.14
KNOP1-201ENST00000219837 LINC01547P58512 204 aaPredicted RBP7.91□□□□□ -1.14
KNOP1-201ENST00000219837 C2orf48Q96LS8 159 aa7.91□□□□□ -1.14
KNOP1-201ENST00000219837 IMUPQ9GZP8 106 aa7.91□□□□□ -1.14
KNOP1-201ENST00000219837 COX7CP15954 63 aa7.91□□□□□ -1.14
KNOP1-201ENST00000219837 POLEQ07864 2286 aa7.91□□□□□ -1.14
KNOP1-201ENST00000219837 F8WDY8 70 aa7.9□□□□□ -1.14
KNOP1-201ENST00000219837 LINC00337Q8N6G1 96 aa7.9□□□□□ -1.14
KNOP1-201ENST00000219837 DOCK10Q96BY6 2186 aa7.89□□□□□ -1.15
KNOP1-201ENST00000219837 H0Y9P7 68 aa7.89□□□□□ -1.15
KNOP1-201ENST00000219837 NHLRC4P0CG21 123 aaPredicted RBP7.89□□□□□ -1.15
KNOP1-201ENST00000219837 MALRD1Q5VYJ5 2156 aa7.88□□□□□ -1.15
KNOP1-201ENST00000219837 LINC00575Q6W349 94 aa7.88□□□□□ -1.15
KNOP1-201ENST00000219837 MED12LQ86YW9 2145 aa7.88□□□□□ -1.15
KNOP1-201ENST00000219837 TSPEAR-AS2P59090 65 aa7.88□□□□□ -1.15
KNOP1-201ENST00000219837 PRLHP81277 87 aa7.88□□□□□ -1.15
KNOP1-201ENST00000219837 FHL3Q13643 280 aa7.87□□□□□ -1.15
KNOP1-201ENST00000219837 Q6Q795 121 aa7.87□□□□□ -1.15
KNOP1-201ENST00000219837 TRAV7A0A075B6U4 112 aa7.87□□□□□ -1.15
KNOP1-201ENST00000219837 CEP250Q9BV73 2442 aa7.87□□□□□ -1.15
KNOP1-201ENST00000219837 MDFIQ99750 246 aa7.87□□□□□ -1.15
KNOP1-201ENST00000219837 XGP55808 180 aa7.87□□□□□ -1.15
KNOP1-201ENST00000219837 C7orf65Q6ZTY9 151 aa7.87□□□□□ -1.15
KNOP1-201ENST00000219837 HCG22E2RYF7 251 aa7.86□□□□□ -1.15
KNOP1-201ENST00000219837 Q6ZRU5 148 aa7.86□□□□□ -1.15
KNOP1-201ENST00000219837 EXPH5Q8NEV8 1989 aa7.86□□□□□ -1.15
KNOP1-201ENST00000219837 CNFNQ9BYD5 112 aa7.86□□□□□ -1.15
KNOP1-201ENST00000219837 ADAMTSL4-AS1Q5T5F5 129 aa7.86□□□□□ -1.15
KNOP1-201ENST00000219837 A0A087WSZ3 146 aa7.85□□□□□ -1.15
KNOP1-201ENST00000219837 APC2O95996 2303 aa7.85□□□□□ -1.15
KNOP1-201ENST00000219837 BEAN1Q3B7T3 259 aa7.85□□□□□ -1.15
KNOP1-201ENST00000219837 SOSTDC1Q6X4U4 206 aa7.85□□□□□ -1.15
KNOP1-201ENST00000219837 ZNF580Q9UK33 172 aa7.85□□□□□ -1.15
KNOP1-201ENST00000219837 PCNX2A6NKB5 2137 aa7.84□□□□□ -1.15
KNOP1-201ENST00000219837 A8MTW9 85 aa7.84□□□□□ -1.15
KNOP1-201ENST00000219837 C22orf24Q9Y442 160 aa7.84□□□□□ -1.15
KNOP1-201ENST00000219837 EML5Q05BV3 1969 aa7.84□□□□□ -1.16
KNOP1-201ENST00000219837 A0A087WVE0 104 aa7.83□□□□□ -1.16
KNOP1-201ENST00000219837 SMCR5Q8TEV8 140 aa7.83□□□□□ -1.16
KNOP1-201ENST00000219837 CRYGAP11844 174 aa7.83□□□□□ -1.16
KNOP1-201ENST00000219837 AMELXQ99217 191 aa7.83□□□□□ -1.16
KNOP1-201ENST00000219837 C1orf195Q5TG92 126 aa7.82□□□□□ -1.16
KNOP1-201ENST00000219837 TECTAO75443 2155 aa7.82□□□□□ -1.16
KNOP1-201ENST00000219837 HCFC1P51610 2035 aa7.82□□□□□ -1.16
KNOP1-201ENST00000219837 TRBV7-7A0A0K0K1E9 115 aa7.81□□□□□ -1.16
KNOP1-201ENST00000219837 CSDC2Q9Y534 153 aaKnown RBP7.81□□□□□ -1.16
KNOP1-201ENST00000219837 DSCAML1Q8TD84 2053 aa7.81□□□□□ -1.16
KNOP1-201ENST00000219837 A0A1B0GUV1 79 aa7.81□□□□□ -1.16
KNOP1-201ENST00000219837 IGKV2D-30A0A075B6S6 120 aa7.81□□□□□ -1.16
KNOP1-201ENST00000219837 IGKV2-30P06310 120 aa7.81□□□□□ -1.16
KNOP1-201ENST00000219837 SPACA4Q8TDM5 124 aa7.81□□□□□ -1.16
KNOP1-201ENST00000219837 A0A1W2PPR1 153 aa7.8□□□□□ -1.16
KNOP1-201ENST00000219837 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
KNOP1-201ENST00000219837 SPTBN1Q01082 2364 aaKnown RBP7.79□□□□□ -1.16
KNOP1-201ENST00000219837 PSPHP1O15172 72 aa7.79□□□□□ -1.16
KNOP1-201ENST00000219837 URB1-AS1Q96HZ7 61 aa7.79□□□□□ -1.16
KNOP1-201ENST00000219837 PKDREJQ9NTG1 2253 aa7.79□□□□□ -1.16
KNOP1-201ENST00000219837 WNK2Q9Y3S1 2297 aa7.79□□□□□ -1.16
KNOP1-201ENST00000219837 MOBPQ13875 183 aa7.78□□□□□ -1.16
KNOP1-201ENST00000219837 SMIM26A0A096LP01 95 aa7.78□□□□□ -1.16
KNOP1-201ENST00000219837 Q8N3U1 123 aa7.78□□□□□ -1.16
KNOP1-201ENST00000219837 FAM229AH3BQW9 127 aa7.77□□□□□ -1.17
KNOP1-201ENST00000219837 CHTF8P0CG12 524 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms