RNA–Protein interactions for RNA: ENST00000216416.8

CNIH1-201, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNIH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-201ENST00000216416 UBE2D1P51668 147 aa4.51□□□□□ -1.69
CNIH1-201ENST00000216416 NHP2Q9NX24 153 aaKnown RBP4.51□□□□□ -1.69
CNIH1-201ENST00000216416 TRAV12-1A0A0B4J245 112 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 APOMO95445 188 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 SRSF9Q13242 221 aaKnown RBP eCLIP4.5□□□□□ -1.69
CNIH1-201ENST00000216416 LYPD5Q6UWN5 251 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 MTURNQ8N3F0 131 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 C10orf126Q8N4M7 172 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 HIST1H4GQ99525 98 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 PTTG1IPP53801 180 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 BVES-AS1Q5T3Y7 98 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 TIMM21Q9BVV7 248 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 C9orf116Q5BN46 136 aaPredicted RBP4.5□□□□□ -1.69
CNIH1-201ENST00000216416 ADAMTSL4-AS1Q5T5F5 129 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 PTH2Q96A98 100 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 TMEM101Q96IK0 257 aa4.5□□□□□ -1.69
CNIH1-201ENST00000216416 PFN2P35080 140 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 MRPL23Q16540 153 aaKnown RBP4.49□□□□□ -1.69
CNIH1-201ENST00000216416 C2orf88Q9BSF0 95 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 TMEM223A0PJW6 202 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 E9PLD3 99 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
CNIH1-201ENST00000216416 TMEM97Q5BJF2 176 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 C6orf223Q8N319 242 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 MYMXA0A1B0GTQ4 84 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 CIDEAO60543 219 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 FUSP35637 526 aaKnown RBP eCLIP4.49□□□□□ -1.69
CNIH1-201ENST00000216416 MRPS36P82909 103 aaKnown RBP4.49□□□□□ -1.69
CNIH1-201ENST00000216416 SPATA25Q9BR10 227 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 SPANXA1Q9NS26 97 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 ICOSQ9Y6W8 199 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 TM2D3Q9BRN9 247 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 Q9H8V8 135 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 EDA2RQ9HAV5 297 aa4.49□□□□□ -1.69
CNIH1-201ENST00000216416 NDUFA12Q9UI09 145 aa4.48□□□□□ -1.69
CNIH1-201ENST00000216416 PYGO1Q9Y3Y4 419 aa4.48□□□□□ -1.69
CNIH1-201ENST00000216416 LINC00959A0A1B0GUT2 108 aa4.48□□□□□ -1.69
CNIH1-201ENST00000216416 REG3AQ06141 175 aa4.48□□□□□ -1.69
CNIH1-201ENST00000216416 HIGD2BQ4VC39 106 aa4.48□□□□□ -1.69
CNIH1-201ENST00000216416 SMIM1B2RUZ4 78 aa4.48□□□□□ -1.69
CNIH1-201ENST00000216416 CASC10Q5T4H9 136 aa4.48□□□□□ -1.69
CNIH1-201ENST00000216416 NFE4Q86UQ8 179 aa4.47□□□□□ -1.69
CNIH1-201ENST00000216416 M0R2N4 97 aa4.47□□□□□ -1.69
CNIH1-201ENST00000216416 H3BUT2 72 aa4.46□□□□□ -1.69
CNIH1-201ENST00000216416 HERVK_113P61574 105 aa4.46□□□□□ -1.69
CNIH1-201ENST00000216416 CHCHD10Q8WYQ3 142 aaPredicted RBP4.46□□□□□ -1.69
CNIH1-201ENST00000216416 MRPS16Q9Y3D3 137 aaKnown RBP4.46□□□□□ -1.69
CNIH1-201ENST00000216416 PAPPA-AS1Q5QFB9 102 aa4.46□□□□□ -1.7
CNIH1-201ENST00000216416 ENHOQ6UWT2 76 aa4.46□□□□□ -1.7
CNIH1-201ENST00000216416 IGHV3OR16-9A0A0B4J2B5 98 aa4.46□□□□□ -1.7
CNIH1-201ENST00000216416 IGHV1-58A0A0C4DH39 117 aa4.46□□□□□ -1.7
CNIH1-201ENST00000216416 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
CNIH1-201ENST00000216416 MEIG1Q5JSS6 88 aa4.46□□□□□ -1.7
CNIH1-201ENST00000216416 A0A0J9YXY3 114 aa4.46□□□□□ -1.7
CNIH1-201ENST00000216416 LINC00588Q9Y4M8 146 aa4.46□□□□□ -1.7
CNIH1-201ENST00000216416 TINCRA0A1B0GVN0 87 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 SMIM13P0DJ93 91 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 C10orf25Q5T742 122 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 MRPL52Q86TS9 123 aaKnown RBP4.45□□□□□ -1.7
CNIH1-201ENST00000216416 IGKV2D-24A0A075B6R9 120 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 GAGE12HA6NDE8 117 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 TAX1BP3O14907 124 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 NPSP0C0P6 89 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 MUSTN1Q8IVN3 82 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 LINC01620Q4KN68 170 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 C6orf226Q5I0X4 101 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 ORAOV1Q8WV07 137 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
CNIH1-201ENST00000216416 DNAH1Q9P2D7 4330 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 A4D1N5 150 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 VAMP3Q15836 100 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 LELP1Q5T871 98 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 LINC01549A6NIU2 74 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 HERVK_113P63121 156 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 KRTAP1-5Q9BYS1 174 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 MALP21145 153 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 UNQ6190/PRO20217Q6UXQ8 127 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 CEND1Q8N111 149 aa4.44□□□□□ -1.7
CNIH1-201ENST00000216416 LEPROTO15243 131 aa4.43□□□□□ -1.7
CNIH1-201ENST00000216416 SOSTDC1Q6X4U4 206 aa4.43□□□□□ -1.7
CNIH1-201ENST00000216416 HSD52Q0P140 79 aa4.43□□□□□ -1.7
CNIH1-201ENST00000216416 HYDINQ4G0P3 5121 aa4.43□□□□□ -1.7
CNIH1-201ENST00000216416 LINC00158P58513 81 aa4.43□□□□□ -1.7
CNIH1-201ENST00000216416 SS18Q15532 418 aa4.43□□□□□ -1.7
CNIH1-201ENST00000216416 XAGE1AQ9HD64 81 aa4.43□□□□□ -1.7
CNIH1-201ENST00000216416 CRPP02741 224 aa4.42□□□□□ -1.7
CNIH1-201ENST00000216416 CSDC2Q9Y534 153 aaKnown RBP4.42□□□□□ -1.7
CNIH1-201ENST00000216416 TRAV10A0A0B4J240 114 aa4.42□□□□□ -1.7
CNIH1-201ENST00000216416 LOC107984156A0A0G2JMH3 177 aa4.42□□□□□ -1.7
CNIH1-201ENST00000216416 ARL17AQ8IVW1 177 aa4.42□□□□□ -1.7
CNIH1-201ENST00000216416 KLK5Q9Y337 293 aaPredicted RBP4.42□□□□□ -1.7
CNIH1-201ENST00000216416 H3BRM9 83 aa4.42□□□□□ -1.7
CNIH1-201ENST00000216416 MIR7-3HGQ8N6C7 128 aa4.42□□□□□ -1.7
CNIH1-201ENST00000216416 B9D2Q9BPU9 175 aa4.42□□□□□ -1.7
CNIH1-201ENST00000216416 FRAS1Q86XX4 4008 aa4.42□□□□□ -1.7
CNIH1-201ENST00000216416 TIRAPP58753 221 aa4.41□□□□□ -1.7
CNIH1-201ENST00000216416 COX7B2Q8TF08 81 aa4.41□□□□□ -1.7
CNIH1-201ENST00000216416 LITAFQ99732 161 aa4.41□□□□□ -1.7
CNIH1-201ENST00000216416 WFDC2Q14508 124 aa4.41□□□□□ -1.7
CNIH1-201ENST00000216416 PGPEP1Q9NXJ5 209 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms