RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ociad1Q9CRD0 247 aaKnown RBP10.39□□□□□ -0.75
Nup88-203ENSMUST00000108531 Tmem126aQ9D8Y1 196 aa10.39□□□□□ -0.75
Nup88-203ENSMUST00000108531 Icam4Q9ERM2 262 aa10.39□□□□□ -0.75
Nup88-203ENSMUST00000108531 Zfp119aQ9JIC0 545 aa10.39□□□□□ -0.75
Nup88-203ENSMUST00000108531 Ccl8Q9Z121 97 aa10.39□□□□□ -0.75
Nup88-203ENSMUST00000108531 Gm14214V9GX35 225 aa10.39□□□□□ -0.75
Nup88-203ENSMUST00000108531 Ighv1-7A0A075B5T7 117 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Trav14n-3A0A075B645 120 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr1331K7N684 317 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Bst1Q64277 311 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr1333Q7TQV7 317 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Ptrh2Q8R2Y8 181 aaKnown RBP10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Siglec12Q91Y57 467 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 MmdQ9CQY7 238 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Susd2Q9DBX3 820 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Pla2g2eQ9QUL3 142 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Vmn1r61W4VSP5 300 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Gm6970F7DCP6 221 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 IappP12968 93 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 MgpP19788 104 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 CtsgP28293 261 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Gcm1P70348 436 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Fbln7Q501P1 440 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Rbm14Q8C2Q3 669 aaKnown RBP10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Iba57Q8CAK1 358 aaKnown RBP10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 RnasekQ8K3C0 98 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Q9D7E4 109 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Plpp2Q9DAX2 276 aa10.38□□□□□ -0.75
Nup88-203ENSMUST00000108531 Thap8E9Q695 213 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Dnajc30P59041 219 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 SrstQ06666 185 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr1272Q8VGN8 308 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Etfrf1Q91V16 86 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Plxdc1Q91ZV7 500 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Gng10Q9CXP8 68 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Q9DAZ5 108 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Tmub1Q9JMG3 245 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Ramp1Q9WTJ5 148 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Col6a6Q8C6K9 2265 aa10.37□□□□□ -0.75
Nup88-203ENSMUST00000108531 Gm20379A0A087WR34 119 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Ms4a12A0A087WSB9 263 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Vma21-psA0A140T8R2 101 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Hsbp1l1B2RXB2 72 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Cited1P97769 203 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Pilrb2Q2YFS1 225 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr1465Q7TQR2 307 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Vstm5Q9D806 199 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr961Q9EQ84 314 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Ammecr1Q9JHT5 344 aaKnown RBP10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Muc5acE9QAQ8 3455 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Tcrg-C2A0A075B5Z2 167 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Trav12-3A0A075B648 115 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 P01853 167 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Pex7P97865 318 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 AsipQ03288 131 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr411Q7TRW8 315 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Col13a1Q9R1N9 751 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Shank1D3YZU1 2167 aa10.36□□□□□ -0.75
Nup88-203ENSMUST00000108531 Dlx6P70397 175 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 Shisal1Q0VBP7 198 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 Gm10775Q3V290 127 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr1381Q7TQT4 311 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr1373Q7TQT6 311 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 Tnfsf18Q7TS55 173 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr816Q8VFU2 312 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 PpbpQ9EQI5 113 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr19Q9JHB2 309 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 1810011H11RikE9PVZ2 95 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 Cxcl13O55038 109 aa10.35□□□□□ -0.75
Nup88-203ENSMUST00000108531 Gm28778A0A087WSK7 233 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Olfr1337A2ACY8 315 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 AponG3X9D6 251 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Cd59aO55186 123 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Cd27P41272 250 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Oosp2Q4FZG8 168 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Prickle3Q80VL3 624 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 OtosQ8R448 89 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Necap2Q9D1J1 266 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 CadB2RQC6 2225 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Pcnx1Q9QYC1 2344 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Ighv5-16A0A0B4J1P4 117 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Cox6a1P43024 111 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Rnd1Q8BLR7 232 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Rbfox2Q8BP71 449 aaKnown RBP10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Gm11733Q8BQP1 125 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 Mixl1Q9WUI0 231 aa10.34□□□□□ -0.75
Nup88-203ENSMUST00000108531 DdtO35215 118 aa10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Gm9733Q1AN91 178 aa10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Isg15Q64339 161 aaKnown RBP10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Sox21Q811W0 276 aa10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Slamf7Q8BHK6 333 aa10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Olfr1380Q7TQT5 311 aa10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Ttc9cQ810A3 171 aa10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Gm12689Q8BQU9 117 aa10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Ssbp1Q9CYR0 152 aaKnown RBP10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Fam241bQ9D882 120 aa10.33□□□□□ -0.76
Nup88-203ENSMUST00000108531 Atp6v0cP63082 155 aa10.32□□□□□ -0.76
Nup88-203ENSMUST00000108531 Neil2Q6R2P8 329 aa10.32□□□□□ -0.76
Nup88-203ENSMUST00000108531 Lrfn3Q8BLY3 626 aa10.32□□□□□ -0.76
Nup88-203ENSMUST00000108531 PgpQ8CHP8 321 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 155.1 ms