RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 Q9H8V8 135 aa11.91□□□□□ -0.5
PHGDH-230ENST00000641927 IGLV4-60A0A075B6I1 120 aa11.91□□□□□ -0.5
PHGDH-230ENST00000641927 IGIPA6NJ69 53 aa11.91□□□□□ -0.5
PHGDH-230ENST00000641927 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-230ENST00000641927 TIMM21Q9BVV7 248 aa11.91□□□□□ -0.5
PHGDH-230ENST00000641927 A0A1B0GUV1 79 aa11.9□□□□□ -0.5
PHGDH-230ENST00000641927 ANGP03950 147 aaKnown RBP11.9□□□□□ -0.5
PHGDH-230ENST00000641927 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.5
PHGDH-230ENST00000641927 TIMM17AQ99595 171 aa11.9□□□□□ -0.5
PHGDH-230ENST00000641927 HSPB8Q9UJY1 196 aa11.9□□□□□ -0.5
PHGDH-230ENST00000641927 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
PHGDH-230ENST00000641927 ATP5LO75964 103 aa11.89□□□□□ -0.51
PHGDH-230ENST00000641927 DNAH10OSP0CZ25 163 aa11.89□□□□□ -0.51
PHGDH-230ENST00000641927 LINC01556Q5JQF7 62 aa11.89□□□□□ -0.51
PHGDH-230ENST00000641927 Q6ZUT4 128 aa11.89□□□□□ -0.51
PHGDH-230ENST00000641927 LINC00173Q6ZV60 143 aa11.89□□□□□ -0.51
PHGDH-230ENST00000641927 TMEM141Q96I45 108 aa11.89□□□□□ -0.51
PHGDH-230ENST00000641927 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
PHGDH-230ENST00000641927 LY6G6CO95867 125 aa11.88□□□□□ -0.51
PHGDH-230ENST00000641927 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
PHGDH-230ENST00000641927 Q6ZN92 141 aa11.88□□□□□ -0.51
PHGDH-230ENST00000641927 ZNF664Q8N3J9 261 aa11.88□□□□□ -0.51
PHGDH-230ENST00000641927 IGLV4-3A0A075B6K6 122 aa11.87□□□□□ -0.51
PHGDH-230ENST00000641927 IFI27L1Q96BM0 104 aa11.87□□□□□ -0.51
PHGDH-230ENST00000641927 C12orf57Q99622 126 aa11.87□□□□□ -0.51
PHGDH-230ENST00000641927 CDC42SE2Q9NRR3 84 aa11.87□□□□□ -0.51
PHGDH-230ENST00000641927 KLK12Q9UKR0 248 aa11.87□□□□□ -0.51
PHGDH-230ENST00000641927 IGKV3OR2-268A0A0C4DH90 116 aa11.87□□□□□ -0.51
PHGDH-230ENST00000641927 H0Y8G0 127 aa11.87□□□□□ -0.51
PHGDH-230ENST00000641927 CLPSL2Q6UWE3 100 aa11.87□□□□□ -0.51
PHGDH-230ENST00000641927 PRSS1P07477 247 aa11.86□□□□□ -0.51
PHGDH-230ENST00000641927 SMIM6P0DI80 62 aa11.86□□□□□ -0.51
PHGDH-230ENST00000641927 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
PHGDH-230ENST00000641927 PAPPA-AS1Q5QFB9 102 aa11.86□□□□□ -0.51
PHGDH-230ENST00000641927 LINC00269Q8N2A0 174 aa11.86□□□□□ -0.51
PHGDH-230ENST00000641927 VCX2Q9H322 139 aa11.86□□□□□ -0.51
PHGDH-230ENST00000641927 S100A12P80511 92 aa11.85□□□□□ -0.51
PHGDH-230ENST00000641927 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
PHGDH-230ENST00000641927 TEX43Q6ZNM6 134 aa11.85□□□□□ -0.51
PHGDH-230ENST00000641927 LINC00476Q8WZB0 136 aa11.85□□□□□ -0.51
PHGDH-230ENST00000641927 FAM104AQ969W3 186 aa11.85□□□□□ -0.51
PHGDH-230ENST00000641927 TRAV9-2A0A087WT02 112 aa11.84□□□□□ -0.51
PHGDH-230ENST00000641927 PCP4L1A6NKN8 68 aa11.84□□□□□ -0.51
PHGDH-230ENST00000641927 NPSP0C0P6 89 aa11.84□□□□□ -0.51
PHGDH-230ENST00000641927 BAALCQ8WXS3 180 aa11.84□□□□□ -0.51
PHGDH-230ENST00000641927 MAP1LC3CQ9BXW4 147 aa11.84□□□□□ -0.51
PHGDH-230ENST00000641927 CRPP02741 224 aa11.83□□□□□ -0.52
PHGDH-230ENST00000641927 REG3AQ06141 175 aa11.83□□□□□ -0.52
PHGDH-230ENST00000641927 PYY3Q5JQD4 70 aa11.83□□□□□ -0.52
PHGDH-230ENST00000641927 UBE2WQ96B02 151 aa11.83□□□□□ -0.52
PHGDH-230ENST00000641927 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.52
PHGDH-230ENST00000641927 KRTDAPP60985 99 aa11.82□□□□□ -0.52
PHGDH-230ENST00000641927 JOSD1Q15040 202 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-230ENST00000641927 C10orf126Q8N4M7 172 aa11.82□□□□□ -0.52
PHGDH-230ENST00000641927 TRAV13-1A0A0B4J241 112 aa11.81□□□□□ -0.52
PHGDH-230ENST00000641927 PMVKQ15126 192 aa11.81□□□□□ -0.52
PHGDH-230ENST00000641927 AMELXQ99217 191 aa11.81□□□□□ -0.52
PHGDH-230ENST00000641927 CST9LQ9H4G1 147 aa11.81□□□□□ -0.52
PHGDH-230ENST00000641927 DNAH1Q9P2D7 4330 aa11.81□□□□□ -0.52
PHGDH-230ENST00000641927 VPS13DQ5THJ4 4388 aa11.8□□□□□ -0.52
PHGDH-230ENST00000641927 CTAG1AP78358 180 aa11.8□□□□□ -0.52
PHGDH-230ENST00000641927 NBDYA0A0U1RRE5 68 aa11.79□□□□□ -0.52
PHGDH-230ENST00000641927 PRSS29PA6NIE9 313 aa11.79□□□□□ -0.52
PHGDH-230ENST00000641927 K7EP13 123 aa11.79□□□□□ -0.52
PHGDH-230ENST00000641927 M0R2N4 97 aa11.79□□□□□ -0.52
PHGDH-230ENST00000641927 C3orf79P0CE67 100 aa11.79□□□□□ -0.52
PHGDH-230ENST00000641927 TTC32Q5I0X7 151 aa11.79□□□□□ -0.52
PHGDH-230ENST00000641927 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
PHGDH-230ENST00000641927 Q9HAA7 133 aa11.79□□□□□ -0.52
PHGDH-230ENST00000641927 IGLV10-54A0A075B6I4 117 aa11.78□□□□□ -0.52
PHGDH-230ENST00000641927 SYS1-DBNDD2H3BUS1 97 aa11.78□□□□□ -0.52
PHGDH-230ENST00000641927 PRR34Q9NV39 138 aa11.78□□□□□ -0.52
PHGDH-230ENST00000641927 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
PHGDH-230ENST00000641927 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
PHGDH-230ENST00000641927 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
PHGDH-230ENST00000641927 ALMS1Q8TCU4 4167 aa11.77□□□□□ -0.53
PHGDH-230ENST00000641927 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.53
PHGDH-230ENST00000641927 SCGB1D1O95968 90 aa11.77□□□□□ -0.53
PHGDH-230ENST00000641927 SS18Q15532 418 aa11.77□□□□□ -0.53
PHGDH-230ENST00000641927 CHTOPQ9Y3Y2 248 aaKnown RBP11.77□□□□□ -0.53
PHGDH-230ENST00000641927 TRAV8-3A0A0A6YYJ7 113 aa11.76□□□□□ -0.53
PHGDH-230ENST00000641927 UBE2D1P51668 147 aa11.76□□□□□ -0.53
PHGDH-230ENST00000641927 MIAQ16674 131 aa11.76□□□□□ -0.53
PHGDH-230ENST00000641927 PMCHL2Q9BQD1 86 aa11.76□□□□□ -0.53
PHGDH-230ENST00000641927 XCL1P47992 114 aa11.75□□□□□ -0.53
PHGDH-230ENST00000641927 PET117Q6UWS5 81 aa11.75□□□□□ -0.53
PHGDH-230ENST00000641927 IGKV2D-24A0A075B6R9 120 aa11.74□□□□□ -0.53
PHGDH-230ENST00000641927 A0A0J9YXV3 536 aa11.74□□□□□ -0.53
PHGDH-230ENST00000641927 CCL25O15444 150 aa11.74□□□□□ -0.53
PHGDH-230ENST00000641927 ODF1Q14990 250 aa11.74□□□□□ -0.53
PHGDH-230ENST00000641927 SPATA12Q7Z6I5 190 aa11.74□□□□□ -0.53
PHGDH-230ENST00000641927 C1orf43Q9BWL3 253 aa11.74□□□□□ -0.53
PHGDH-230ENST00000641927 MRPL35Q9NZE8 188 aaKnown RBP11.74□□□□□ -0.53
PHGDH-230ENST00000641927 TRAV8-4A0A0B4J246 113 aa11.73□□□□□ -0.53
PHGDH-230ENST00000641927 CHCHD10Q8WYQ3 142 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-230ENST00000641927 GEMIN7Q9H840 131 aaKnown RBP11.73□□□□□ -0.53
PHGDH-230ENST00000641927 C20orf202A1L168 122 aa11.72□□□□□ -0.53
PHGDH-230ENST00000641927 F8VRH5 84 aa11.72□□□□□ -0.53
PHGDH-230ENST00000641927 LINC00242Q5T6M2 205 aa11.72□□□□□ -0.53
PHGDH-230ENST00000641927 IGLV4-69A0A075B6H9 119 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms