RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 LINC01620Q4KN68 170 aa14.25□□□□□ -0.13
SCN1B-206ENST00000638536 PHOX2AO14813 284 aa14.24□□□□□ -0.13
SCN1B-206ENST00000638536 TCAPO15273 167 aa14.24□□□□□ -0.13
SCN1B-206ENST00000638536 ZNF25P17030 456 aaPredicted RBP14.24□□□□□ -0.13
SCN1B-206ENST00000638536 MRPL52Q86TS9 123 aaKnown RBP14.24□□□□□ -0.13
SCN1B-206ENST00000638536 RPS10P5Q9NQ39 176 aa14.23□□□□□ -0.13
SCN1B-206ENST00000638536 CDC42SE2Q9NRR3 84 aa14.23□□□□□ -0.13
SCN1B-206ENST00000638536 OR5A1Q8NGJ0 315 aa14.23□□□□□ -0.13
SCN1B-206ENST00000638536 UBE2D4Q9Y2X8 147 aa14.23□□□□□ -0.13
SCN1B-206ENST00000638536 FAT1Q14517 4588 aa14.22□□□□□ -0.13
SCN1B-206ENST00000638536 XGP55808 180 aa14.22□□□□□ -0.13
SCN1B-206ENST00000638536 RPL39P62891 51 aaKnown RBP14.22□□□□□ -0.13
SCN1B-206ENST00000638536 TMEM101Q96IK0 257 aa14.22□□□□□ -0.13
SCN1B-206ENST00000638536 LOC389332A0A1B0GUA5 103 aa14.21□□□□□ -0.13
SCN1B-206ENST00000638536 APOC3P02656 99 aa14.21□□□□□ -0.13
SCN1B-206ENST00000638536 PRSS1P07477 247 aa14.21□□□□□ -0.13
SCN1B-206ENST00000638536 RHEBQ15382 184 aa14.21□□□□□ -0.13
SCN1B-206ENST00000638536 FAM30AQ9NZY2 134 aa14.21□□□□□ -0.13
SCN1B-206ENST00000638536 GAGE12HA6NDE8 117 aa14.2□□□□□ -0.14
SCN1B-206ENST00000638536 HAMPP81172 84 aa14.2□□□□□ -0.14
SCN1B-206ENST00000638536 KIAA1644Q3SXP7 199 aa14.2□□□□□ -0.14
SCN1B-206ENST00000638536 RNASE13Q5GAN3 156 aaKnown RBP14.2□□□□□ -0.14
SCN1B-206ENST00000638536 ABCA13Q86UQ4 5058 aa14.2□□□□□ -0.14
SCN1B-206ENST00000638536 PCLOQ9Y6V0 5065 aa14.2□□□□□ -0.14
SCN1B-206ENST00000638536 TRAV9-1A0A075B6T8 112 aa14.19□□□□□ -0.14
SCN1B-206ENST00000638536 ZNF664Q8N3J9 261 aa14.19□□□□□ -0.14
SCN1B-206ENST00000638536 CHCHD10Q8WYQ3 142 aaPredicted RBP14.19□□□□□ -0.14
SCN1B-206ENST00000638536 FAM104AQ969W3 186 aa14.19□□□□□ -0.14
SCN1B-206ENST00000638536 KRTAP4-5Q9BYR2 181 aa14.19□□□□□ -0.14
SCN1B-206ENST00000638536 PRSS47A8MTI9 375 aa14.19□□□□□ -0.14
SCN1B-206ENST00000638536 LINC00959A0A1B0GUT2 108 aa14.18□□□□□ -0.14
SCN1B-206ENST00000638536 S100PP25815 95 aa14.18□□□□□ -0.14
SCN1B-206ENST00000638536 LAMTOR2Q9Y2Q5 125 aa14.17□□□□□ -0.14
SCN1B-206ENST00000638536 DGAT2L7PQ6IED9 249 aa14.16□□□□□ -0.14
SCN1B-206ENST00000638536 Q6ZUT4 128 aa14.16□□□□□ -0.14
SCN1B-206ENST00000638536 CSDC2Q9Y534 153 aaKnown RBP14.16□□□□□ -0.14
SCN1B-206ENST00000638536 C14orf177Q52M58 125 aa14.15□□□□□ -0.14
SCN1B-206ENST00000638536 OPRPNQ99935 248 aaPredicted RBP14.15□□□□□ -0.14
SCN1B-206ENST00000638536 MAP1LC3AQ9H492 121 aa14.15□□□□□ -0.14
SCN1B-206ENST00000638536 XCL1P47992 114 aa14.15□□□□□ -0.14
SCN1B-206ENST00000638536 FOXI1Q12951 378 aa14.15□□□□□ -0.14
SCN1B-206ENST00000638536 C15orf56Q8N910 161 aa14.15□□□□□ -0.14
SCN1B-206ENST00000638536 CCL25O15444 150 aa14.14□□□□□ -0.15
SCN1B-206ENST00000638536 TIMM21Q9BVV7 248 aa14.14□□□□□ -0.15
SCN1B-206ENST00000638536 GNB1LQ9BYB4 327 aa14.14□□□□□ -0.15
SCN1B-206ENST00000638536 TGIF2-C20orf24A0A0A6YYL0 155 aa14.13□□□□□ -0.15
SCN1B-206ENST00000638536 RAB5AP20339 215 aa14.13□□□□□ -0.15
SCN1B-206ENST00000638536 Q8N8P6 123 aa14.13□□□□□ -0.15
SCN1B-206ENST00000638536 TMEM18Q96B42 140 aa14.13□□□□□ -0.15
SCN1B-206ENST00000638536 SLPIP03973 132 aa14.12□□□□□ -0.15
SCN1B-206ENST00000638536 SVBPQ8N300 66 aa14.12□□□□□ -0.15
SCN1B-206ENST00000638536 hDV102S1A0JD36 115 aa14.11□□□□□ -0.15
SCN1B-206ENST00000638536 SNAPINO95295 136 aa14.11□□□□□ -0.15
SCN1B-206ENST00000638536 IFI27P40305 119 aaPredicted RBP14.11□□□□□ -0.15
SCN1B-206ENST00000638536 Q6ZSA8 131 aa14.1□□□□□ -0.15
SCN1B-206ENST00000638536 TRAV13-1A0A0B4J241 112 aa14.09□□□□□ -0.15
SCN1B-206ENST00000638536 SS18Q15532 418 aa14.09□□□□□ -0.15
SCN1B-206ENST00000638536 SMAGPQ0VAQ4 97 aa14.08□□□□□ -0.15
SCN1B-206ENST00000638536 HIGD2BQ4VC39 106 aa14.08□□□□□ -0.15
SCN1B-206ENST00000638536 ALKBH7Q9BT30 221 aaPredicted RBP14.08□□□□□ -0.15
SCN1B-206ENST00000638536 MRPL18Q9H0U6 180 aaKnown RBP14.08□□□□□ -0.15
SCN1B-206ENST00000638536 SPANXA1Q9NS26 97 aa14.08□□□□□ -0.15
SCN1B-206ENST00000638536 VPS13BQ7Z7G8 4022 aa14.08□□□□□ -0.16
SCN1B-206ENST00000638536 Q8N1X5 172 aa14.08□□□□□ -0.16
SCN1B-206ENST00000638536 SMR3BP02814 79 aaPredicted RBP14.07□□□□□ -0.16
SCN1B-206ENST00000638536 CD164L2Q6UWJ8 174 aa14.07□□□□□ -0.16
SCN1B-206ENST00000638536 C9orf163Q8N9P6 203 aa14.07□□□□□ -0.16
SCN1B-206ENST00000638536 FABP9Q0Z7S8 132 aa14.06□□□□□ -0.16
SCN1B-206ENST00000638536 C1orf196B1AJZ1 125 aa14.05□□□□□ -0.16
SCN1B-206ENST00000638536 MRPS36P82909 103 aaKnown RBP14.05□□□□□ -0.16
SCN1B-206ENST00000638536 NXT2Q9NPJ8 142 aaKnown RBP14.05□□□□□ -0.16
SCN1B-206ENST00000638536 CNBPP62633 177 aaKnown RBP14.04□□□□□ -0.16
SCN1B-206ENST00000638536 COX19Q49B96 90 aa14.04□□□□□ -0.16
SCN1B-206ENST00000638536 C2orf66Q6UXQ4 117 aa14.04□□□□□ -0.16
SCN1B-206ENST00000638536 LINC00526Q96FQ7 95 aa14.04□□□□□ -0.16
SCN1B-206ENST00000638536 YPEL4Q96NS1 127 aa14.04□□□□□ -0.16
SCN1B-206ENST00000638536 IGLV4-3A0A075B6K6 122 aa14.04□□□□□ -0.16
SCN1B-206ENST00000638536 MT-ND6P03923 174 aa14.04□□□□□ -0.16
SCN1B-206ENST00000638536 PYGO1Q9Y3Y4 419 aa14.04□□□□□ -0.16
SCN1B-206ENST00000638536 ZC2HC1BQ5TFG8 222 aa14.03□□□□□ -0.16
SCN1B-206ENST00000638536 CFAP161Q6P656 301 aa14.03□□□□□ -0.16
SCN1B-206ENST00000638536 GVQW2A0A096LPI5 108 aaPredicted RBP14.02□□□□□ -0.16
SCN1B-206ENST00000638536 ORMDL2Q53FV1 153 aa14.02□□□□□ -0.16
SCN1B-206ENST00000638536 CYSLTR1Q9Y271 337 aa14.02□□□□□ -0.16
SCN1B-206ENST00000638536 PANO1I0J062 215 aa14.01□□□□□ -0.17
SCN1B-206ENST00000638536 K7EMI3 77 aa14.01□□□□□ -0.17
SCN1B-206ENST00000638536 SDIM1Q6ZPB5 146 aa14.01□□□□□ -0.17
SCN1B-206ENST00000638536 SCXQ7RTU7 201 aa14.01□□□□□ -0.17
SCN1B-206ENST00000638536 C5orf38Q86SI9 138 aa14.01□□□□□ -0.17
SCN1B-206ENST00000638536 PRSS3P2Q8NHM4 247 aa14.01□□□□□ -0.17
SCN1B-206ENST00000638536 AP5S1Q9NUS5 200 aa14.01□□□□□ -0.17
SCN1B-206ENST00000638536 TRAPPC1Q9Y5R8 145 aa14.01□□□□□ -0.17
SCN1B-206ENST00000638536 IFITM10A6NMD0 228 aa14□□□□□ -0.17
SCN1B-206ENST00000638536 CBLN2Q8IUK8 224 aa14□□□□□ -0.17
SCN1B-206ENST00000638536 SRRM2Q9UQ35 2752 aaKnown RBP13.99□□□□□ -0.17
SCN1B-206ENST00000638536 IGIPA6NJ69 53 aa13.99□□□□□ -0.17
SCN1B-206ENST00000638536 TMEM141Q96I45 108 aa13.99□□□□□ -0.17
SCN1B-206ENST00000638536 IGHV1-58A0A0C4DH39 117 aa13.98□□□□□ -0.17
SCN1B-206ENST00000638536 COX7A2LO14548 114 aa13.98□□□□□ -0.17
SCN1B-206ENST00000638536 LINC00173Q6ZV60 143 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms