RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 CSMD2Q7Z408 3487 aa2.81□□□□□ -1.96
GABRA1-220ENST00000638159 COLCA2A8K830 154 aa2.81□□□□□ -1.96
GABRA1-220ENST00000638159 SNCGO76070 127 aa2.81□□□□□ -1.96
GABRA1-220ENST00000638159 ARMS2P0C7Q2 107 aa2.81□□□□□ -1.96
GABRA1-220ENST00000638159 MTURNQ8N3F0 131 aa2.81□□□□□ -1.96
GABRA1-220ENST00000638159 OR10D4PQ8NGN7 298 aa2.81□□□□□ -1.96
GABRA1-220ENST00000638159 ALMS1Q8TCU4 4167 aa2.81□□□□□ -1.96
GABRA1-220ENST00000638159 IGKV1D-8A0A087WSZ0 117 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 C5orf52A6NGY3 159 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 TYMSP04818 313 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 LINC01551Q86U37 167 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 C11orf52Q96A22 123 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 SMIM12Q96EX1 92 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 TCAPO15273 167 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 GATCO43716 136 aaKnown RBP2.8□□□□□ -1.96
GABRA1-220ENST00000638159 PRSS1P07477 247 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 A8MTW9 85 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 F8WEM9 126 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 CCL25O15444 150 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 IGLV7-43P04211 117 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 ZNF506Q5JVG8 444 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 PRO1933Q9H354 126 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 HERC2O95714 4834 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 TRRAPQ9Y4A5 3859 aa2.8□□□□□ -1.96
GABRA1-220ENST00000638159 IGSF23A1L1A6 192 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 C9JQL5 133 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 NUPR1O60356 82 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 FABP4P15090 132 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 TP53RKQ96S44 253 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 IMUPQ9GZP8 106 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 IGLV8-61A0A075B6I0 122 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 TRBV19A0A075B6N1 114 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 GAGE10A6NGK3 116 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 IFITM10A6NMD0 228 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 G0S2P27469 103 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 PRSS3P2Q8NHM4 247 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 ZNF727A8MUV8 499 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 H0Y9J4 135 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 CDC34P49427 236 aaPredicted RBP2.79□□□□□ -1.96
GABRA1-220ENST00000638159 MPV17L2Q567V2 206 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 SPACA4Q8TDM5 124 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 RETNLBQ9BQ08 111 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 GNG13Q9P2W3 67 aa2.79□□□□□ -1.96
GABRA1-220ENST00000638159 RBAKDNA6NC62 111 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 H3BQ15 152 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 CRXO43186 299 aaPredicted RBP2.78□□□□□ -1.96
GABRA1-220ENST00000638159 NHLH2Q02577 135 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 C5orf38Q86SI9 138 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 TMEM170AQ8WVE7 144 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 A0A1B0GV90 55 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 FAM24AA6NFZ4 105 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 PYYP10082 97 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 RAB4BP61018 213 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 OR5C1Q8NGR4 320 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 TRGC2P03986 189 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 SEC11AP67812 179 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 ADIRFQ15847 76 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 CFAP126Q5VTH2 177 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 Q6ZRN7 208 aaPredicted RBP2.78□□□□□ -1.96
GABRA1-220ENST00000638159 TMEM126AQ9H061 195 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 PARLQ9H300 379 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 ST20Q9HBF5 79 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 PLAC8Q9NZF1 115 aa2.78□□□□□ -1.96
GABRA1-220ENST00000638159 TRAV8-2A0A0B4J237 113 aa2.78□□□□□ -1.97
GABRA1-220ENST00000638159 MRPS12O15235 138 aaKnown RBP2.78□□□□□ -1.97
GABRA1-220ENST00000638159 TWIST1Q15672 202 aa2.78□□□□□ -1.97
GABRA1-220ENST00000638159 PYY3Q5JQD4 70 aa2.78□□□□□ -1.97
GABRA1-220ENST00000638159 ATP11AUNQ6ZP68 121 aa2.78□□□□□ -1.97
GABRA1-220ENST00000638159 C14orf178Q8N769 122 aaPredicted RBP2.78□□□□□ -1.97
GABRA1-220ENST00000638159 GNB1LQ9BYB4 327 aa2.78□□□□□ -1.97
GABRA1-220ENST00000638159 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.97
GABRA1-220ENST00000638159 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.78□□□□□ -1.97
GABRA1-220ENST00000638159 KMT2AQ03164 3969 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 TRAV9-1A0A075B6T8 112 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 H3BS24 57 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 ATP5LO75964 103 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 ATP6V0CP27449 155 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 FP248Q71RG6 208 aaPredicted RBP2.77□□□□□ -1.97
GABRA1-220ENST00000638159 WFDC1Q9HC57 220 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 SOCS3O14543 225 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 CRISP2P16562 243 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 ZNF25P17030 456 aaPredicted RBP2.77□□□□□ -1.97
GABRA1-220ENST00000638159 DDTP30046 118 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 NMUP48645 174 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 SFRP2Q96HF1 295 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 CYYR1Q96J86 154 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 SMIM7Q9BQ49 75 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 MAP1LC3B2A6NCE7 125 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 SLC25A20O43772 301 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 LGALS3P17931 250 aaKnown RBP2.77□□□□□ -1.97
GABRA1-220ENST00000638159 RPL29P47914 159 aaKnown RBP2.77□□□□□ -1.97
GABRA1-220ENST00000638159 RYR3Q15413 4870 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 MRPL52Q86TS9 123 aaKnown RBP2.77□□□□□ -1.97
GABRA1-220ENST00000638159 BAGE2Q86Y30 109 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 MAP1LC3BQ9GZQ8 125 aa2.77□□□□□ -1.97
GABRA1-220ENST00000638159 IGKV3D-20A0A0C4DH25 116 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 CNBPP62633 177 aaKnown RBP2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST1H2BKO60814 126 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 SCGB1D1O95968 90 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST1H2BJP06899 126 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms