RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
LIN28B-202ENST00000635857 RHEBQ15382 184 aa11.2□□□□□ -0.62
LIN28B-202ENST00000635857 MAP1LC3AQ9H492 121 aa11.19□□□□□ -0.62
LIN28B-202ENST00000635857 DNAH5Q8TE73 4624 aa11.19□□□□□ -0.62
LIN28B-202ENST00000635857 LRP1BQ9NZR2 4599 aa11.18□□□□□ -0.62
LIN28B-202ENST00000635857 CLRN3Q8NCR9 226 aa11.18□□□□□ -0.62
LIN28B-202ENST00000635857 RPS10P5Q9NQ39 176 aa11.18□□□□□ -0.62
LIN28B-202ENST00000635857 CARHSP1Q9Y2V2 147 aaKnown RBP11.18□□□□□ -0.62
LIN28B-202ENST00000635857 RYR1P21817 5038 aa11.18□□□□□ -0.62
LIN28B-202ENST00000635857 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
LIN28B-202ENST00000635857 SS18Q15532 418 aa11.17□□□□□ -0.62
LIN28B-202ENST00000635857 C10orf91Q5T1B1 145 aa11.17□□□□□ -0.62
LIN28B-202ENST00000635857 CFAP161Q6P656 301 aa11.17□□□□□ -0.62
LIN28B-202ENST00000635857 ZNF664Q8N3J9 261 aa11.17□□□□□ -0.62
LIN28B-202ENST00000635857 CHCHD10Q8WYQ3 142 aaPredicted RBP11.17□□□□□ -0.62
LIN28B-202ENST00000635857 AP5S1Q9NUS5 200 aa11.17□□□□□ -0.62
LIN28B-202ENST00000635857 KRTAP26-1Q6PEX3 210 aa11.16□□□□□ -0.62
LIN28B-202ENST00000635857 CDC42SE2Q9NRR3 84 aa11.16□□□□□ -0.62
LIN28B-202ENST00000635857 UBE2D4Q9Y2X8 147 aa11.16□□□□□ -0.62
LIN28B-202ENST00000635857 CSDC2Q9Y534 153 aaKnown RBP11.16□□□□□ -0.62
LIN28B-202ENST00000635857 hDV102S1A0JD36 115 aa11.15□□□□□ -0.62
LIN28B-202ENST00000635857 APOC3P02656 99 aa11.15□□□□□ -0.62
LIN28B-202ENST00000635857 COX19Q49B96 90 aa11.15□□□□□ -0.62
LIN28B-202ENST00000635857 LOC389332A0A1B0GUA5 103 aa11.14□□□□□ -0.63
LIN28B-202ENST00000635857 LINC00959A0A1B0GUT2 108 aa11.14□□□□□ -0.63
LIN28B-202ENST00000635857 XCL1P47992 114 aa11.14□□□□□ -0.63
LIN28B-202ENST00000635857 TIMM21Q9BVV7 248 aa11.14□□□□□ -0.63
LIN28B-202ENST00000635857 CCL25O15444 150 aa11.13□□□□□ -0.63
LIN28B-202ENST00000635857 SNAPINO95295 136 aa11.13□□□□□ -0.63
LIN28B-202ENST00000635857 PRSS1P07477 247 aa11.13□□□□□ -0.63
LIN28B-202ENST00000635857 SVBPQ8N300 66 aa11.13□□□□□ -0.63
LIN28B-202ENST00000635857 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
LIN28B-202ENST00000635857 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.12□□□□□ -0.63
LIN28B-202ENST00000635857 IFI27P40305 119 aaPredicted RBP11.12□□□□□ -0.63
LIN28B-202ENST00000635857 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
LIN28B-202ENST00000635857 C1orf196B1AJZ1 125 aa11.11□□□□□ -0.63
LIN28B-202ENST00000635857 MT-ND6P03923 174 aa11.11□□□□□ -0.63
LIN28B-202ENST00000635857 RPL39P62891 51 aaKnown RBP11.11□□□□□ -0.63
LIN28B-202ENST00000635857 Q8N8P6 123 aa11.11□□□□□ -0.63
LIN28B-202ENST00000635857 GNB1LQ9BYB4 327 aa11.11□□□□□ -0.63
LIN28B-202ENST00000635857 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
LIN28B-202ENST00000635857 K7EMI3 77 aa11.1□□□□□ -0.63
LIN28B-202ENST00000635857 LINC01620Q4KN68 170 aa11.1□□□□□ -0.63
LIN28B-202ENST00000635857 ORMDL2Q53FV1 153 aa11.1□□□□□ -0.63
LIN28B-202ENST00000635857 RNASE13Q5GAN3 156 aaKnown RBP11.1□□□□□ -0.63
LIN28B-202ENST00000635857 Q6ZUT4 128 aa11.1□□□□□ -0.63
LIN28B-202ENST00000635857 Q8N1X5 172 aa11.1□□□□□ -0.63
LIN28B-202ENST00000635857 TRAV13-1A0A0B4J241 112 aa11.09□□□□□ -0.63
LIN28B-202ENST00000635857 XGP55808 180 aa11.09□□□□□ -0.63
LIN28B-202ENST00000635857 CD164L2Q6UWJ8 174 aa11.09□□□□□ -0.63
LIN28B-202ENST00000635857 APOBP04114 4563 aaKnown RBP11.08□□□□□ -0.64
LIN28B-202ENST00000635857 MALP21145 153 aa11.08□□□□□ -0.64
LIN28B-202ENST00000635857 G0S2P27469 103 aa11.08□□□□□ -0.64
LIN28B-202ENST00000635857 FOXI1Q12951 378 aa11.08□□□□□ -0.64
LIN28B-202ENST00000635857 KIAA1644Q3SXP7 199 aa11.08□□□□□ -0.64
LIN28B-202ENST00000635857 CYSLTR1Q9Y271 337 aa11.08□□□□□ -0.64
LIN28B-202ENST00000635857 IGHV1-58A0A0C4DH39 117 aa11.07□□□□□ -0.64
LIN28B-202ENST00000635857 CNBPP62633 177 aaKnown RBP11.07□□□□□ -0.64
LIN28B-202ENST00000635857 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
LIN28B-202ENST00000635857 C9orf163Q8N9P6 203 aa11.07□□□□□ -0.64
LIN28B-202ENST00000635857 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
LIN28B-202ENST00000635857 HAMPP81172 84 aa11.06□□□□□ -0.64
LIN28B-202ENST00000635857 MRPS36P82909 103 aaKnown RBP11.06□□□□□ -0.64
LIN28B-202ENST00000635857 FABP9Q0Z7S8 132 aa11.06□□□□□ -0.64
LIN28B-202ENST00000635857 C15orf56Q8N910 161 aa11.06□□□□□ -0.64
LIN28B-202ENST00000635857 PRSS3P2Q8NHM4 247 aa11.06□□□□□ -0.64
LIN28B-202ENST00000635857 HSPG2P98160 4391 aa11.05□□□□□ -0.64
LIN28B-202ENST00000635857 IGHV3-64A0A075B6Q5 118 aa11.05□□□□□ -0.64
LIN28B-202ENST00000635857 EPM2AB3EWF7 344 aa11.05□□□□□ -0.64
LIN28B-202ENST00000635857 COX7A2LO14548 114 aa11.05□□□□□ -0.64
LIN28B-202ENST00000635857 C2orf66Q6UXQ4 117 aa11.05□□□□□ -0.64
LIN28B-202ENST00000635857 Q6ZN92 141 aa11.05□□□□□ -0.64
LIN28B-202ENST00000635857 Q6ZSA8 131 aa11.05□□□□□ -0.64
LIN28B-202ENST00000635857 MRPL18Q9H0U6 180 aaKnown RBP11.05□□□□□ -0.64
LIN28B-202ENST00000635857 FAM30AQ9NZY2 134 aa11.05□□□□□ -0.64
LIN28B-202ENST00000635857 PYGO1Q9Y3Y4 419 aa11.05□□□□□ -0.64
LIN28B-202ENST00000635857 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
LIN28B-202ENST00000635857 FAM229AH3BQW9 127 aa11.04□□□□□ -0.64
LIN28B-202ENST00000635857 ZNF561-AS1K7EIQ3 104 aa11.04□□□□□ -0.64
LIN28B-202ENST00000635857 TMEM141Q96I45 108 aa11.04□□□□□ -0.64
LIN28B-202ENST00000635857 APOMO95445 188 aa11.03□□□□□ -0.64
LIN28B-202ENST00000635857 TEX43Q6ZNM6 134 aa11.03□□□□□ -0.64
LIN28B-202ENST00000635857 C2orf88Q9BSF0 95 aa11.03□□□□□ -0.64
LIN28B-202ENST00000635857 SMR3BP02814 79 aaPredicted RBP11.02□□□□□ -0.65
LIN28B-202ENST00000635857 PAPPA-AS1Q5QFB9 102 aa11.02□□□□□ -0.65
LIN28B-202ENST00000635857 OPRPNQ99935 248 aaPredicted RBP11.02□□□□□ -0.65
LIN28B-202ENST00000635857 SMCO4Q9NRQ5 59 aa11.02□□□□□ -0.65
LIN28B-202ENST00000635857 PKIGQ9Y2B9 76 aa11.02□□□□□ -0.65
LIN28B-202ENST00000635857 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
LIN28B-202ENST00000635857 TGIF2-C20orf24A0A0A6YYL0 155 aa11.01□□□□□ -0.65
LIN28B-202ENST00000635857 Q5VSD8 79 aa11.01□□□□□ -0.65
LIN28B-202ENST00000635857 ALKBH7Q9BT30 221 aaPredicted RBP11.01□□□□□ -0.65
LIN28B-202ENST00000635857 CHAC1Q9BUX1 264 aa11.01□□□□□ -0.65
LIN28B-202ENST00000635857 IGLV4-3A0A075B6K6 122 aa11□□□□□ -0.65
LIN28B-202ENST00000635857 LINC01549A6NIU2 74 aa11□□□□□ -0.65
LIN28B-202ENST00000635857 NPSP0C0P6 89 aa11□□□□□ -0.65
LIN28B-202ENST00000635857 FA2HQ7L5A8 372 aa11□□□□□ -0.65
LIN28B-202ENST00000635857 SCXQ7RTU7 201 aa11□□□□□ -0.65
LIN28B-202ENST00000635857 C5orf38Q86SI9 138 aa10.99□□□□□ -0.65
LIN28B-202ENST00000635857 DPH3Q96FX2 82 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms