RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 TEX49A0A1B0GTD5 131 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 LOC101927531A0A1B0GV80 90 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 A0A1B0GWA3 101 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 C2orf70A6NJV1 201 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 FAM223BA6NKX1 122 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 F8WEM9 126 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 RTL8CO15255 209 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 UBE2D1P51668 147 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 EDDM3BP56851 147 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 PLGLAQ15195 96 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 DEFB116Q30KQ4 102 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 DEFB113Q30KQ7 82 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 LINC00483Q53H64 154 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 Q6JHZ5 121 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 ZNF833PQ6ZTB9 187 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
PSPC1-208ENST00000635562 BAGE3Q86Y29 109 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 BAGE2Q86Y30 109 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 LYPD6Q86Y78 171 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 C20orf197Q8N268 126 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 IFI27L1Q96BM0 104 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 COL4A5P29400 1685 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 FAM208AQ9UK61 1670 aaKnown RBP1.79□□□□□ -2.12
PSPC1-208ENST00000635562 FREM3P0C091 2139 aa1.79□□□□□ -2.12
PSPC1-208ENST00000635562 MED13Q9UHV7 2174 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 LY75O60449 1722 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 LRRC37A3O60309 1634 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 IGHV3OR16-8A0A075B7F1 116 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 TRBV6-6A0A0A6YYG2 114 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 TRAV12-1A0A0B4J245 112 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 TMEM30CPA0ZSE6 113 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 TMEM14DPA8MWL7 114 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 CHKB-CPT1BH3BT56 60 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 IGLV1-47P01700 117 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 C10orf128Q5T292 105 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 UBALD1Q8TB05 177 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 TMEM14BQ9NUH8 114 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 ARL2-SNX15V9GYD0 113 aa1.78□□□□□ -2.12
PSPC1-208ENST00000635562 MYO7BQ6PIF6 2116 aa1.78□□□□□ -2.13
PSPC1-208ENST00000635562 CR1P17927 2039 aa1.78□□□□□ -2.13
PSPC1-208ENST00000635562 SAMD9Q5K651 1589 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 PRRC2AP48634 2157 aaKnown RBP1.77□□□□□ -2.13
PSPC1-208ENST00000635562 TRBV10-1A0A0K0K1A3 114 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 LOC285095A0A1B0GVY8 99 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 CEBPZOSA8MTT3 80 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 C10orf142B7Z368 130 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 TFF1P04155 84 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 CISD3P0C7P0 127 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 SFTA2Q6UW10 78 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 C2orf82Q6UX34 121 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 LINC00167Q96N53 147 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 PROK2Q9HC23 129 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 ANAPC11Q9NYG5 84 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 PSENENQ9NZ42 101 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 KLK12Q9UKR0 248 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 UBE2D4Q9Y2X8 147 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 LHFPL6Q9Y693 200 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 QSER1Q2KHR3 1735 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 ZNF831Q5JPB2 1677 aa1.77□□□□□ -2.13
PSPC1-208ENST00000635562 MED12Q93074 2177 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 ZMYM4Q5VZL5 1548 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 PCDH15Q96QU1 1955 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 ZNF815PA8K554 130 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 PSCAO43653 123 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 IGHV3-33P01772 117 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 IFI27P40305 119 aaPredicted RBP1.76□□□□□ -2.13
PSPC1-208ENST00000635562 KRTAP25-1Q3LHN0 102 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 C1orf137Q5JT78 98 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 ATP5EP2Q5VTU8 51 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 C9orf163Q8N9P6 203 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 CYYR1Q96J86 154 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 NDUFA4L2Q9NRX3 87 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 DLEC1Q9Y238 1755 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 DDX60LQ5H9U9 1706 aaKnown RBP1.76□□□□□ -2.13
PSPC1-208ENST00000635562 IQGAP1P46940 1657 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 PI4KAP42356 2102 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 ESPL1Q14674 2120 aa1.76□□□□□ -2.13
PSPC1-208ENST00000635562 ZFHX2Q9C0A1 2572 aaPredicted RBP1.75□□□□□ -2.13
PSPC1-208ENST00000635562 SPTBP11277 2137 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 TET1Q8NFU7 2136 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 NRAPQ86VF7 1730 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 DOT1LQ8TEK3 1739 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 TRBV6-8A0A0A6YYG3 113 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 A0A0J9YX75 114 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 CLPSL1A2RUU4 121 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 HMGN4O00479 90 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 ZNF861PO60384 105 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 WISP3O95389 354 aaPredicted RBP1.75□□□□□ -2.13
PSPC1-208ENST00000635562 SAA2P0DJI9 122 aaPredicted RBP1.75□□□□□ -2.13
PSPC1-208ENST00000635562 MDKP21741 143 aaPredicted RBP1.75□□□□□ -2.13
PSPC1-208ENST00000635562 ELOF1P60002 83 aaKnown RBP1.75□□□□□ -2.13
PSPC1-208ENST00000635562 ERHP84090 104 aaKnown RBP1.75□□□□□ -2.13
PSPC1-208ENST00000635562 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 CSAG1Q6PB30 78 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 CLECL1Q8IZS7 167 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 FAM103A1Q9BTL3 118 aaKnown RBP1.75□□□□□ -2.13
PSPC1-208ENST00000635562 LRP6O75581 1613 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 CPS1P31327 1500 aa1.75□□□□□ -2.13
PSPC1-208ENST00000635562 MDC1Q14676 2089 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms