RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, human

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB28-208	ENST00000630951	FCER1G	P30273	86 aa		13.81	□□□□□ -0.2
RAB28-208	ENST00000630951	MRPL54	Q6P161	138 aa	Known RBP	13.81	□□□□□ -0.2
RAB28-208	ENST00000630951	CFAP161	Q6P656	301 aa		13.81	□□□□□ -0.2
RAB28-208	ENST00000630951	C20orf78	Q9BR46	151 aa		13.81	□□□□□ -0.2
RAB28-208	ENST00000630951	CKS2	P33552	79 aa		13.8	□□□□□ -0.2
RAB28-208	ENST00000630951	CIRBP-AS1	Q8TBR5	109 aa		13.8	□□□□□ -0.2
RAB28-208	ENST00000630951	AP5S1	Q9NUS5	200 aa		13.8	□□□□□ -0.2
RAB28-208	ENST00000630951	CLLU1	Q5K131	121 aa		13.79	□□□□□ -0.2
RAB28-208	ENST00000630951	CDC42SE2	Q9NRR3	84 aa		13.79	□□□□□ -0.2
RAB28-208	ENST00000630951	RPL32	P62910	135 aa	Known RBP	13.79	□□□□□ -0.2
RAB28-208	ENST00000630951	ATP5L2	Q7Z4Y8	100 aa		13.79	□□□□□ -0.2
RAB28-208	ENST00000630951	LINC00528	Q8N1L1	170 aa		13.79	□□□□□ -0.2
RAB28-208	ENST00000630951	PLA2G1B	P04054	148 aa	Known RBP	13.78	□□□□□ -0.2
RAB28-208	ENST00000630951	CSDC2	Q9Y534	153 aa	Known RBP	13.78	□□□□□ -0.2
RAB28-208	ENST00000630951	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.77	□□□□□ -0.21
RAB28-208	ENST00000630951	SMAGP	Q0VAQ4	97 aa		13.77	□□□□□ -0.21
RAB28-208	ENST00000630951	SDIM1	Q6ZPB5	146 aa		13.77	□□□□□ -0.21
RAB28-208	ENST00000630951	ZNF664	Q8N3J9	261 aa		13.77	□□□□□ -0.21
RAB28-208	ENST00000630951	C15orf56	Q8N910	161 aa		13.77	□□□□□ -0.21
RAB28-208	ENST00000630951	LINC00959	A0A1B0GUT2	108 aa		13.76	□□□□□ -0.21
RAB28-208	ENST00000630951	ANAPC16	Q96DE5	110 aa		13.76	□□□□□ -0.21
RAB28-208	ENST00000630951	TCAP	O15273	167 aa		13.75	□□□□□ -0.21
RAB28-208	ENST00000630951	TNFRSF6B	O95407	300 aa		13.75	□□□□□ -0.21
RAB28-208	ENST00000630951	PPBP	P02775	128 aa		13.75	□□□□□ -0.21
RAB28-208	ENST00000630951	MT-ND4L	P03901	98 aa		13.75	□□□□□ -0.21
RAB28-208	ENST00000630951	SLPI	P03973	132 aa		13.75	□□□□□ -0.21
RAB28-208	ENST00000630951	FOXI1	Q12951	378 aa		13.75	□□□□□ -0.21
RAB28-208	ENST00000630951		D6R8Y8	96 aa		13.75	□□□□□ -0.21
RAB28-208	ENST00000630951	PHOX2A	O14813	284 aa		13.75	□□□□□ -0.21
RAB28-208	ENST00000630951	XCL1	P47992	114 aa		13.74	□□□□□ -0.21
RAB28-208	ENST00000630951	UBE2D4	Q9Y2X8	147 aa		13.74	□□□□□ -0.21
RAB28-208	ENST00000630951	SS18	Q15532	418 aa		13.73	□□□□□ -0.21
RAB28-208	ENST00000630951	TMEM18	Q96B42	140 aa		13.73	□□□□□ -0.21
RAB28-208	ENST00000630951	CCL25	O15444	150 aa		13.72	□□□□□ -0.21
RAB28-208	ENST00000630951	IGHV3-64	A0A075B6Q5	118 aa		13.72	□□□□□ -0.21
RAB28-208	ENST00000630951	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.72	□□□□□ -0.21
RAB28-208	ENST00000630951	TIMM21	Q9BVV7	248 aa		13.72	□□□□□ -0.21
RAB28-208	ENST00000630951	SMIM2	Q9BVW6	85 aa		13.72	□□□□□ -0.21
RAB28-208	ENST00000630951	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.72	□□□□□ -0.21
RAB28-208	ENST00000630951	NPY	P01303	97 aa		13.71	□□□□□ -0.21
RAB28-208	ENST00000630951	CD164L2	Q6UWJ8	174 aa		13.71	□□□□□ -0.21
RAB28-208	ENST00000630951	ORMDL3	Q8N138	153 aa		13.71	□□□□□ -0.21
RAB28-208	ENST00000630951	MYCBP2	O75592	4640 aa		13.7	□□□□□ -0.22
RAB28-208	ENST00000630951	IFITM2	Q01629	132 aa		13.7	□□□□□ -0.22
RAB28-208	ENST00000630951	C1orf196	B1AJZ1	125 aa		13.69	□□□□□ -0.22
RAB28-208	ENST00000630951	HIGD2B	Q4VC39	106 aa		13.69	□□□□□ -0.22
RAB28-208	ENST00000630951	UQCC3	Q6UW78	93 aa		13.69	□□□□□ -0.22
RAB28-208	ENST00000630951	TMEM136	Q6ZRR5	245 aa		13.69	□□□□□ -0.22
RAB28-208	ENST00000630951	FLG2	Q5D862	2391 aa	Predicted RBP	13.69	□□□□□ -0.22
RAB28-208	ENST00000630951	CIRBP	Q14011	172 aa	Known RBP	13.69	□□□□□ -0.22
RAB28-208	ENST00000630951	PANO1	I0J062	215 aa		13.68	□□□□□ -0.22
RAB28-208	ENST00000630951	IGHV1-58	A0A0C4DH39	117 aa		13.67	□□□□□ -0.22
RAB28-208	ENST00000630951	PRELID3A	Q96N28	172 aa		13.67	□□□□□ -0.22
RAB28-208	ENST00000630951	LAMTOR2	Q9Y2Q5	125 aa		13.66	□□□□□ -0.22
RAB28-208	ENST00000630951	TMEM218	A2RU14	115 aa		13.65	□□□□□ -0.22
RAB28-208	ENST00000630951	RPL39	P62891	51 aa	Known RBP	13.65	□□□□□ -0.22
RAB28-208	ENST00000630951	IMMP2L	Q96T52	175 aa		13.65	□□□□□ -0.22
RAB28-208	ENST00000630951	PRSS47	A8MTI9	375 aa		13.64	□□□□□ -0.23
RAB28-208	ENST00000630951	KRTAP10-4	P60372	401 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB28-208	ENST00000630951	RNASE13	Q5GAN3	156 aa	Known RBP	13.64	□□□□□ -0.23
RAB28-208	ENST00000630951		Q6ZUT4	128 aa		13.64	□□□□□ -0.23
RAB28-208	ENST00000630951	SPANXA1	Q9NS26	97 aa		13.64	□□□□□ -0.23
RAB28-208	ENST00000630951	TRAV13-1	A0A0B4J241	112 aa		13.63	□□□□□ -0.23
RAB28-208	ENST00000630951	ADCYAP1	P18509	176 aa		13.63	□□□□□ -0.23
RAB28-208	ENST00000630951	RAB5A	P20339	215 aa		13.63	□□□□□ -0.23
RAB28-208	ENST00000630951	DPH3	Q96FX2	82 aa		13.63	□□□□□ -0.23
RAB28-208	ENST00000630951	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB28-208	ENST00000630951	COX6A2	Q02221	97 aa		13.62	□□□□□ -0.23
RAB28-208	ENST00000630951	SPACA4	Q8TDM5	124 aa		13.62	□□□□□ -0.23
RAB28-208	ENST00000630951	COX7A2L	O14548	114 aa		13.61	□□□□□ -0.23
RAB28-208	ENST00000630951	MRPS36	P82909	103 aa	Known RBP	13.61	□□□□□ -0.23
RAB28-208	ENST00000630951	FAM104A	Q969W3	186 aa		13.61	□□□□□ -0.23
RAB28-208	ENST00000630951	ZNF561-AS1	K7EIQ3	104 aa		13.6	□□□□□ -0.23
RAB28-208	ENST00000630951	CHTF8	P0CG12	524 aa		13.6	□□□□□ -0.23
RAB28-208	ENST00000630951	MAL	P21145	153 aa		13.6	□□□□□ -0.23
RAB28-208	ENST00000630951	CTDSP1	Q9GZU7	261 aa		13.6	□□□□□ -0.23
RAB28-208	ENST00000630951	PRSS3P2	Q8NHM4	247 aa		13.59	□□□□□ -0.23
RAB28-208	ENST00000630951	SEC11C	Q9BY50	192 aa		13.59	□□□□□ -0.23
RAB28-208	ENST00000630951	MAP1LC3A	Q9H492	121 aa		13.59	□□□□□ -0.23
RAB28-208	ENST00000630951	HERC1	Q15751	4861 aa		13.59	□□□□□ -0.23
RAB28-208	ENST00000630951		A0A087WYN8	130 aa		13.59	□□□□□ -0.23
RAB28-208	ENST00000630951	RPL37A	P61513	92 aa	Known RBP	13.58	□□□□□ -0.24
RAB28-208	ENST00000630951	LINC00526	Q96FQ7	95 aa		13.58	□□□□□ -0.24
RAB28-208	ENST00000630951	PKIG	Q9Y2B9	76 aa		13.58	□□□□□ -0.24
RAB28-208	ENST00000630951	CARD19	Q96LW7	228 aa		13.57	□□□□□ -0.24
RAB28-208	ENST00000630951	PYGO1	Q9Y3Y4	419 aa		13.57	□□□□□ -0.24
RAB28-208	ENST00000630951	LOC389332	A0A1B0GUA5	103 aa		13.56	□□□□□ -0.24
RAB28-208	ENST00000630951	IFI27	P40305	119 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB28-208	ENST00000630951	OPRPN	Q99935	248 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB28-208	ENST00000630951	PLAC8	Q9NZF1	115 aa		13.56	□□□□□ -0.24
RAB28-208	ENST00000630951	TRAV9-1	A0A075B6T8	112 aa		13.56	□□□□□ -0.24
RAB28-208	ENST00000630951	SYCN	Q0VAF6	134 aa		13.56	□□□□□ -0.24
RAB28-208	ENST00000630951		Q8N8P6	123 aa		13.56	□□□□□ -0.24
RAB28-208	ENST00000630951	APOM	O95445	188 aa		13.55	□□□□□ -0.24
RAB28-208	ENST00000630951	C5orf38	Q86SI9	138 aa		13.55	□□□□□ -0.24
RAB28-208	ENST00000630951	IGLV4-69	A0A075B6H9	119 aa		13.54	□□□□□ -0.24
RAB28-208	ENST00000630951		K7EMI3	77 aa		13.54	□□□□□ -0.24
RAB28-208	ENST00000630951	COMMD7	Q86VX2	200 aa		13.54	□□□□□ -0.24
RAB28-208	ENST00000630951	LINC00474	Q9P2X8	69 aa		13.54	□□□□□ -0.24
RAB28-208	ENST00000630951	IGKV2-24	A0A0C4DH68	120 aa		13.53	□□□□□ -0.24

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