RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 RPL36ALQ969Q0 106 aaKnown RBP13.8□□□□□ -0.2
PTBP1-220ENST00000627714 TRBV10-2A0A0K0K1G8 114 aa13.79□□□□□ -0.2
PTBP1-220ENST00000627714 TRGV1A0A0A0MS02 117 aa13.79□□□□□ -0.2
PTBP1-220ENST00000627714 A8MZ25 164 aa13.79□□□□□ -0.2
PTBP1-220ENST00000627714 CIDEAO60543 219 aa13.79□□□□□ -0.2
PTBP1-220ENST00000627714 DAZ2Q13117 558 aaKnown RBP13.79□□□□□ -0.2
PTBP1-220ENST00000627714 DAZ4Q86SG3 579 aaKnown RBP13.79□□□□□ -0.2
PTBP1-220ENST00000627714 TMEM101Q96IK0 257 aa13.79□□□□□ -0.2
PTBP1-220ENST00000627714 DAZ3Q9NR90 486 aaKnown RBP13.79□□□□□ -0.2
PTBP1-220ENST00000627714 FAM208BQ5VWN6 2430 aa13.79□□□□□ -0.2
PTBP1-220ENST00000627714 IGHV3OR16-12A0A075B7B8 117 aa13.78□□□□□ -0.2
PTBP1-220ENST00000627714 IGLV5-39A0A0G2JS06 123 aa13.78□□□□□ -0.2
PTBP1-220ENST00000627714 K7EQD1 137 aa13.78□□□□□ -0.2
PTBP1-220ENST00000627714 XGP55808 180 aa13.78□□□□□ -0.2
PTBP1-220ENST00000627714 CMC4P56277 68 aaPredicted RBP13.77□□□□□ -0.21
PTBP1-220ENST00000627714 KRTAP1-3Q8IUG1 177 aa13.77□□□□□ -0.21
PTBP1-220ENST00000627714 COPS9Q8WXC6 57 aa13.77□□□□□ -0.21
PTBP1-220ENST00000627714 UBR5O95071 2799 aaPredicted RBP13.77□□□□□ -0.21
PTBP1-220ENST00000627714 TRAV4A0A0B4J268 109 aa13.76□□□□□ -0.21
PTBP1-220ENST00000627714 RPL13AP40429 203 aaKnown RBP13.76□□□□□ -0.21
PTBP1-220ENST00000627714 NAV2Q8IVL1 2488 aa13.76□□□□□ -0.21
PTBP1-220ENST00000627714 CCL24O00175 119 aa13.76□□□□□ -0.21
PTBP1-220ENST00000627714 MT-ATP8P03928 68 aa13.76□□□□□ -0.21
PTBP1-220ENST00000627714 LINC00242Q5T6M2 205 aa13.76□□□□□ -0.21
PTBP1-220ENST00000627714 ZNF843Q8N446 348 aa13.76□□□□□ -0.21
PTBP1-220ENST00000627714 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
PTBP1-220ENST00000627714 LRRK2Q5S007 2527 aa13.75□□□□□ -0.21
PTBP1-220ENST00000627714 DNAJC9-AS1A6NH13 148 aa13.75□□□□□ -0.21
PTBP1-220ENST00000627714 ZNF462Q96JM2 2506 aa13.75□□□□□ -0.21
PTBP1-220ENST00000627714 PTPN13Q12923 2485 aa13.74□□□□□ -0.21
PTBP1-220ENST00000627714 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-220ENST00000627714 NTN5Q8WTR8 489 aaPredicted RBP13.74□□□□□ -0.21
PTBP1-220ENST00000627714 MYO9AB2RTY4 2548 aa13.74□□□□□ -0.21
PTBP1-220ENST00000627714 H3BT86 120 aa13.74□□□□□ -0.21
PTBP1-220ENST00000627714 CKS1BP61024 79 aa13.74□□□□□ -0.21
PTBP1-220ENST00000627714 COX6A2Q02221 97 aa13.74□□□□□ -0.21
PTBP1-220ENST00000627714 TEX15Q9BXT5 2789 aa13.73□□□□□ -0.21
PTBP1-220ENST00000627714 NPC2P61916 151 aa13.72□□□□□ -0.21
PTBP1-220ENST00000627714 Q6ZTI0 123 aa13.72□□□□□ -0.21
PTBP1-220ENST00000627714 Q9H8V8 135 aa13.72□□□□□ -0.21
PTBP1-220ENST00000627714 LINC00694P0DN24 101 aa13.71□□□□□ -0.21
PTBP1-220ENST00000627714 SMIM1B2RUZ4 78 aa13.71□□□□□ -0.22
PTBP1-220ENST00000627714 LST1O00453 97 aa13.71□□□□□ -0.22
PTBP1-220ENST00000627714 CENPEQ02224 2701 aa13.7□□□□□ -0.22
PTBP1-220ENST00000627714 A0A1W2PRX2 142 aa13.7□□□□□ -0.22
PTBP1-220ENST00000627714 HIST2H2BDQ6DRA6 164 aa13.7□□□□□ -0.22
PTBP1-220ENST00000627714 C2orf82Q6UX34 121 aa13.7□□□□□ -0.22
PTBP1-220ENST00000627714 NTM-AS1Q6ZSK4 140 aa13.7□□□□□ -0.22
PTBP1-220ENST00000627714 LINC00308Q8TCZ7 52 aa13.7□□□□□ -0.22
PTBP1-220ENST00000627714 UBE2WQ96B02 151 aa13.7□□□□□ -0.22
PTBP1-220ENST00000627714 CDC42SE2Q9NRR3 84 aa13.7□□□□□ -0.22
PTBP1-220ENST00000627714 H7C423 109 aa13.69□□□□□ -0.22
PTBP1-220ENST00000627714 C16orf74Q96GX8 76 aa13.69□□□□□ -0.22
PTBP1-220ENST00000627714 FAM110AQ9BQ89 295 aa13.69□□□□□ -0.22
PTBP1-220ENST00000627714 PPDPFQ9H3Y8 114 aa13.69□□□□□ -0.22
PTBP1-220ENST00000627714 HERV-K104P63124 156 aa13.68□□□□□ -0.22
PTBP1-220ENST00000627714 DAND5Q8N907 189 aa13.68□□□□□ -0.22
PTBP1-220ENST00000627714 USP24Q9UPU5 2620 aa13.68□□□□□ -0.22
PTBP1-220ENST00000627714 TRAV13-1A0A0B4J241 112 aa13.67□□□□□ -0.22
PTBP1-220ENST00000627714 GAGE12JA6NER3 117 aa13.67□□□□□ -0.22
PTBP1-220ENST00000627714 GAGE4Q13068 117 aa13.67□□□□□ -0.22
PTBP1-220ENST00000627714 GAGE5Q13069 117 aa13.67□□□□□ -0.22
PTBP1-220ENST00000627714 C11orf44Q8N8P7 122 aa13.67□□□□□ -0.22
PTBP1-220ENST00000627714 TMEM243Q9BU79 118 aa13.67□□□□□ -0.22
PTBP1-220ENST00000627714 NOP10Q9NPE3 64 aaKnown RBP13.67□□□□□ -0.22
PTBP1-220ENST00000627714 TEX49A0A1B0GTD5 131 aa13.66□□□□□ -0.22
PTBP1-220ENST00000627714 UBE2L6O14933 153 aa13.66□□□□□ -0.22
PTBP1-220ENST00000627714 ZNF625Q96I27 306 aaPredicted RBP13.66□□□□□ -0.22
PTBP1-220ENST00000627714 ABCA12Q86UK0 2595 aa13.66□□□□□ -0.22
PTBP1-220ENST00000627714 CITED2Q99967 270 aaPredicted RBP13.66□□□□□ -0.22
PTBP1-220ENST00000627714 ESM1Q9NQ30 184 aa13.66□□□□□ -0.22
PTBP1-220ENST00000627714 TRAV8-4A0A0B4J246 113 aa13.65□□□□□ -0.22
PTBP1-220ENST00000627714 F5H768 121 aa13.65□□□□□ -0.22
PTBP1-220ENST00000627714 PRIMA1Q86XR5 153 aa13.65□□□□□ -0.22
PTBP1-220ENST00000627714 CLEC2BQ92478 149 aa13.65□□□□□ -0.22
PTBP1-220ENST00000627714 TRBV6-4A0A1B0GX49 114 aa13.64□□□□□ -0.23
PTBP1-220ENST00000627714 NDUFA7O95182 113 aa13.64□□□□□ -0.23
PTBP1-220ENST00000627714 C16orf95Q9H693 158 aa13.64□□□□□ -0.23
PTBP1-220ENST00000627714 GIG44P09565 113 aaPredicted RBP13.63□□□□□ -0.23
PTBP1-220ENST00000627714 MEIG1Q5JSS6 88 aa13.63□□□□□ -0.23
PTBP1-220ENST00000627714 WFDC11Q8NEX6 87 aa13.63□□□□□ -0.23
PTBP1-220ENST00000627714 CITED1Q99966 193 aa13.63□□□□□ -0.23
PTBP1-220ENST00000627714 ZFYVE26Q68DK2 2539 aa13.63□□□□□ -0.23
PTBP1-220ENST00000627714 TRGV2A0A075B6R0 118 aa13.62□□□□□ -0.23
PTBP1-220ENST00000627714 PLAC8L1A1L4L8 177 aa13.62□□□□□ -0.23
PTBP1-220ENST00000627714 SNCGO76070 127 aa13.62□□□□□ -0.23
PTBP1-220ENST00000627714 OVOL2Q9BRP0 275 aa13.62□□□□□ -0.23
PTBP1-220ENST00000627714 CHD6Q8TD26 2715 aa13.61□□□□□ -0.23
PTBP1-220ENST00000627714 COX7A2LO14548 114 aa13.61□□□□□ -0.23
PTBP1-220ENST00000627714 DEFB121Q5J5C9 76 aa13.61□□□□□ -0.23
PTBP1-220ENST00000627714 IGLV1-51P01701 117 aa13.6□□□□□ -0.23
PTBP1-220ENST00000627714 LINC01006Q8NI28 216 aa13.6□□□□□ -0.23
PTBP1-220ENST00000627714 FAM240AA0A1B0GVK7 77 aa13.6□□□□□ -0.23
PTBP1-220ENST00000627714 GAGE7O76087 117 aa13.6□□□□□ -0.23
PTBP1-220ENST00000627714 RNASE1P07998 156 aaKnown RBP13.6□□□□□ -0.23
PTBP1-220ENST00000627714 GAGE12FP0CL80 117 aa13.6□□□□□ -0.23
PTBP1-220ENST00000627714 GAGE12GP0CL81 117 aa13.6□□□□□ -0.23
PTBP1-220ENST00000627714 GAGE12IP0CL82 117 aa13.6□□□□□ -0.23
PTBP1-220ENST00000627714 SHISA2Q6UWI4 295 aa13.6□□□□□ -0.23
PTBP1-220ENST00000627714 SOSTDC1Q6X4U4 206 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms