RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 RMI2Q96E14 147 aa9.87□□□□□ -0.83
PNKP-221ENST00000627317 RPL39P62891 51 aaKnown RBP9.86□□□□□ -0.83
PNKP-221ENST00000627317 Q6ZRN7 208 aaPredicted RBP9.86□□□□□ -0.83
PNKP-221ENST00000627317 TM2D2Q9BX73 214 aa9.86□□□□□ -0.83
PNKP-221ENST00000627317 PSCAO43653 123 aa9.85□□□□□ -0.83
PNKP-221ENST00000627317 TRGC2P03986 189 aa9.85□□□□□ -0.83
PNKP-221ENST00000627317 REG3AQ06141 175 aa9.85□□□□□ -0.83
PNKP-221ENST00000627317 C18orf32Q8TCD1 76 aa9.85□□□□□ -0.83
PNKP-221ENST00000627317 PRR34Q9NV39 138 aa9.85□□□□□ -0.83
PNKP-221ENST00000627317 IGKV2D-24A0A075B6R9 120 aa9.84□□□□□ -0.83
PNKP-221ENST00000627317 MIAQ16674 131 aa9.84□□□□□ -0.83
PNKP-221ENST00000627317 ENHOQ6UWT2 76 aa9.84□□□□□ -0.83
PNKP-221ENST00000627317 TIMM21Q9BVV7 248 aa9.84□□□□□ -0.83
PNKP-221ENST00000627317 C1orf43Q9BWL3 253 aa9.84□□□□□ -0.83
PNKP-221ENST00000627317 SPANXA1Q9NS26 97 aa9.84□□□□□ -0.83
PNKP-221ENST00000627317 CYSLTR1Q9Y271 337 aa9.84□□□□□ -0.83
PNKP-221ENST00000627317 UBE2D4Q9Y2X8 147 aa9.84□□□□□ -0.83
PNKP-221ENST00000627317 LRP1BQ9NZR2 4599 aa9.83□□□□□ -0.84
PNKP-221ENST00000627317 RYR1P21817 5038 aa9.83□□□□□ -0.84
PNKP-221ENST00000627317 IGKV3OR2-268A0A0C4DH90 116 aa9.83□□□□□ -0.84
PNKP-221ENST00000627317 G0S2P27469 103 aa9.83□□□□□ -0.84
PNKP-221ENST00000627317 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
PNKP-221ENST00000627317 COX11Q9Y6N1 276 aa9.83□□□□□ -0.84
PNKP-221ENST00000627317 C2orf66Q6UXQ4 117 aa9.82□□□□□ -0.84
PNKP-221ENST00000627317 Q6ZUT4 128 aa9.82□□□□□ -0.84
PNKP-221ENST00000627317 ZNF664Q8N3J9 261 aa9.82□□□□□ -0.84
PNKP-221ENST00000627317 AP5S1Q9NUS5 200 aa9.82□□□□□ -0.84
PNKP-221ENST00000627317 PCLOQ9Y6V0 5065 aa9.81□□□□□ -0.84
PNKP-221ENST00000627317 RAB5BP61020 215 aa9.81□□□□□ -0.84
PNKP-221ENST00000627317 CDC42SE2Q9NRR3 84 aa9.81□□□□□ -0.84
PNKP-221ENST00000627317 IGLV10-54A0A075B6I4 117 aa9.8□□□□□ -0.84
PNKP-221ENST00000627317 TRAV8-4A0A0B4J246 113 aa9.8□□□□□ -0.84
PNKP-221ENST00000627317 LINC01546A6NGU7 62 aa9.8□□□□□ -0.84
PNKP-221ENST00000627317 RNASE13Q5GAN3 156 aaKnown RBP9.8□□□□□ -0.84
PNKP-221ENST00000627317 LINC00614P0C842 121 aa9.79□□□□□ -0.84
PNKP-221ENST00000627317 MRPS36P82909 103 aaKnown RBP9.79□□□□□ -0.84
PNKP-221ENST00000627317 PYGO1Q9Y3Y4 419 aa9.79□□□□□ -0.84
PNKP-221ENST00000627317 DNAH5Q8TE73 4624 aa9.78□□□□□ -0.84
PNKP-221ENST00000627317 HSPG2P98160 4391 aa9.78□□□□□ -0.84
PNKP-221ENST00000627317 EREGO14944 169 aa9.78□□□□□ -0.84
PNKP-221ENST00000627317 BAGE3Q86Y29 109 aa9.78□□□□□ -0.84
PNKP-221ENST00000627317 TOMM6Q96B49 74 aa9.78□□□□□ -0.84
PNKP-221ENST00000627317 IGLV4-3A0A075B6K6 122 aa9.77□□□□□ -0.85
PNKP-221ENST00000627317 LINC01549A6NIU2 74 aa9.77□□□□□ -0.85
PNKP-221ENST00000627317 KRTAP10-2P60368 255 aa9.77□□□□□ -0.85
PNKP-221ENST00000627317 SS18Q15532 418 aa9.77□□□□□ -0.85
PNKP-221ENST00000627317 Q6ZN92 141 aa9.77□□□□□ -0.85
PNKP-221ENST00000627317 URB1-AS1Q96HZ7 61 aa9.77□□□□□ -0.85
PNKP-221ENST00000627317 TMEM141Q96I45 108 aa9.77□□□□□ -0.85
PNKP-221ENST00000627317 OPRPNQ99935 248 aaPredicted RBP9.77□□□□□ -0.85
PNKP-221ENST00000627317 LINC00959A0A1B0GUT2 108 aa9.76□□□□□ -0.85
PNKP-221ENST00000627317 IFITM10A6NMD0 228 aa9.76□□□□□ -0.85
PNKP-221ENST00000627317 CHCHD10Q8WYQ3 142 aaPredicted RBP9.76□□□□□ -0.85
PNKP-221ENST00000627317 CHCHD1Q96BP2 118 aaKnown RBP9.76□□□□□ -0.85
PNKP-221ENST00000627317 SCGB3A1Q96QR1 104 aa9.76□□□□□ -0.85
PNKP-221ENST00000627317 APOBP04114 4563 aaKnown RBP9.75□□□□□ -0.85
PNKP-221ENST00000627317 A0A087WTM6 91 aa9.75□□□□□ -0.85
PNKP-221ENST00000627317 TRAV13-1A0A0B4J241 112 aa9.75□□□□□ -0.85
PNKP-221ENST00000627317 C16orf90A8MZG2 172 aa9.75□□□□□ -0.85
PNKP-221ENST00000627317 HBDP02042 147 aa9.75□□□□□ -0.85
PNKP-221ENST00000627317 NPSP0C0P6 89 aa9.75□□□□□ -0.85
PNKP-221ENST00000627317 PAPPA-AS1Q5QFB9 102 aa9.75□□□□□ -0.85
PNKP-221ENST00000627317 TEX43Q6ZNM6 134 aa9.75□□□□□ -0.85
PNKP-221ENST00000627317 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
PNKP-221ENST00000627317 TIMM17AQ99595 171 aa9.75□□□□□ -0.85
PNKP-221ENST00000627317 GAGE12HA6NDE8 117 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 LECT2O14960 151 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 CCL25O15444 150 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 XCL1P47992 114 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 PMCHL1Q16048 86 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 ERASQ7Z444 233 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 MAPKAPK5-AS1Q8N8E1 139 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 BAALCQ8WXS3 180 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 C2orf88Q9BSF0 95 aa9.74□□□□□ -0.85
PNKP-221ENST00000627317 C1orf196B1AJZ1 125 aa9.73□□□□□ -0.85
PNKP-221ENST00000627317 HSBP1O75506 76 aa9.73□□□□□ -0.85
PNKP-221ENST00000627317 KRTAP26-1Q6PEX3 210 aa9.73□□□□□ -0.85
PNKP-221ENST00000627317 FAM104AQ969W3 186 aa9.73□□□□□ -0.85
PNKP-221ENST00000627317 KRTAP17-1Q9BYP8 105 aa9.73□□□□□ -0.85
PNKP-221ENST00000627317 VCX2Q9H322 139 aa9.73□□□□□ -0.85
PNKP-221ENST00000627317 ABCA13Q86UQ4 5058 aa9.72□□□□□ -0.85
PNKP-221ENST00000627317 A0A096LNJ9 63 aa9.72□□□□□ -0.85
PNKP-221ENST00000627317 LRCOL1A6NCL2 159 aa9.72□□□□□ -0.85
PNKP-221ENST00000627317 CDK2AP2O75956 126 aa9.72□□□□□ -0.85
PNKP-221ENST00000627317 HIST1H2BKO60814 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 SERF1AO75920 110 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST1H2BJP06899 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST1H2BOP23527 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST1H2BBP33778 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST1H2BDP58876 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST1H2BCP62807 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 WFDC2Q14508 124 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST2H2BEQ16778 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST1H2BHQ93079 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST1H2BNQ99877 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 HIST1H2BMQ99879 126 aa9.71□□□□□ -0.86
PNKP-221ENST00000627317 USP17L23D6RBM5 183 aa9.7□□□□□ -0.86
PNKP-221ENST00000627317 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms