RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 IGIPA6NJ69 53 aa11.21□□□□□ -0.61
CCNA1-203ENST00000625767 ANGP03950 147 aaKnown RBP11.21□□□□□ -0.61
CCNA1-203ENST00000625767 TMEM18Q96B42 140 aa11.21□□□□□ -0.61
CCNA1-203ENST00000625767 RYR2Q92736 4967 aa11.21□□□□□ -0.62
CCNA1-203ENST00000625767 A0A1B0GUV1 79 aa11.2□□□□□ -0.62
CCNA1-203ENST00000625767 IGLV4-3A0A075B6K6 122 aa11.2□□□□□ -0.62
CCNA1-203ENST00000625767 LINC00269Q8N2A0 174 aa11.2□□□□□ -0.62
CCNA1-203ENST00000625767 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
CCNA1-203ENST00000625767 SCGB3A1Q96QR1 104 aa11.2□□□□□ -0.62
CCNA1-203ENST00000625767 CDC42SE2Q9NRR3 84 aa11.2□□□□□ -0.62
CCNA1-203ENST00000625767 IGKV3OR2-268A0A0C4DH90 116 aa11.19□□□□□ -0.62
CCNA1-203ENST00000625767 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
CCNA1-203ENST00000625767 TIMM21Q9BVV7 248 aa11.19□□□□□ -0.62
CCNA1-203ENST00000625767 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
CCNA1-203ENST00000625767 LCE6AA0A183 80 aa11.18□□□□□ -0.62
CCNA1-203ENST00000625767 FABP4P15090 132 aa11.18□□□□□ -0.62
CCNA1-203ENST00000625767 ZNF25P17030 456 aaPredicted RBP11.18□□□□□ -0.62
CCNA1-203ENST00000625767 ZNF664Q8N3J9 261 aa11.18□□□□□ -0.62
CCNA1-203ENST00000625767 TMEM101Q96IK0 257 aa11.18□□□□□ -0.62
CCNA1-203ENST00000625767 SPANXA1Q9NS26 97 aa11.18□□□□□ -0.62
CCNA1-203ENST00000625767 PYGO1Q9Y3Y4 419 aa11.18□□□□□ -0.62
CCNA1-203ENST00000625767 SNRPEP62304 92 aaKnown RBP11.17□□□□□ -0.62
CCNA1-203ENST00000625767 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
CCNA1-203ENST00000625767 ERASQ7Z444 233 aa11.17□□□□□ -0.62
CCNA1-203ENST00000625767 UBE2WQ96B02 151 aa11.17□□□□□ -0.62
CCNA1-203ENST00000625767 CSDC2Q9Y534 153 aaKnown RBP11.17□□□□□ -0.62
CCNA1-203ENST00000625767 S100A6P06703 90 aa11.17□□□□□ -0.62
CCNA1-203ENST00000625767 PKIAP61925 76 aa11.16□□□□□ -0.62
CCNA1-203ENST00000625767 HIST3H2BBQ8N257 126 aa11.16□□□□□ -0.62
CCNA1-203ENST00000625767 TIMM17AQ99595 171 aa11.16□□□□□ -0.62
CCNA1-203ENST00000625767 Q9HAA7 133 aa11.16□□□□□ -0.62
CCNA1-203ENST00000625767 RYR3Q15413 4870 aa11.15□□□□□ -0.62
CCNA1-203ENST00000625767 G0S2P27469 103 aa11.15□□□□□ -0.62
CCNA1-203ENST00000625767 REG3AQ06141 175 aa11.15□□□□□ -0.62
CCNA1-203ENST00000625767 TMEM141Q96I45 108 aa11.15□□□□□ -0.62
CCNA1-203ENST00000625767 IGLV10-54A0A075B6I4 117 aa11.14□□□□□ -0.63
CCNA1-203ENST00000625767 C5orf52A6NGY3 159 aa11.14□□□□□ -0.63
CCNA1-203ENST00000625767 IFITM10A6NMD0 228 aa11.14□□□□□ -0.63
CCNA1-203ENST00000625767 IBA57-AS1B1ANH7 110 aa11.14□□□□□ -0.63
CCNA1-203ENST00000625767 LEPROTL1O95214 131 aa11.14□□□□□ -0.63
CCNA1-203ENST00000625767 MRPS36P82909 103 aaKnown RBP11.14□□□□□ -0.63
CCNA1-203ENST00000625767 Q6ZR54 194 aa11.14□□□□□ -0.63
CCNA1-203ENST00000625767 BAALCQ8WXS3 180 aa11.14□□□□□ -0.63
CCNA1-203ENST00000625767 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
CCNA1-203ENST00000625767 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
CCNA1-203ENST00000625767 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.13□□□□□ -0.63
CCNA1-203ENST00000625767 AMELXQ99217 191 aa11.13□□□□□ -0.63
CCNA1-203ENST00000625767 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
CCNA1-203ENST00000625767 TRAV9-2A0A087WT02 112 aa11.12□□□□□ -0.63
CCNA1-203ENST00000625767 TRAV13-1A0A0B4J241 112 aa11.12□□□□□ -0.63
CCNA1-203ENST00000625767 SMAGPQ0VAQ4 97 aa11.12□□□□□ -0.63
CCNA1-203ENST00000625767 IFI27L1Q96BM0 104 aa11.12□□□□□ -0.63
CCNA1-203ENST00000625767 H0Y8G0 127 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 CRPP02741 224 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 TTC32Q5I0X7 151 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 C10orf126Q8N4M7 172 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 VCX2Q9H322 139 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 LINC00959A0A1B0GUT2 108 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 ATP5LO75964 103 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 Q6ZN92 141 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 TEX43Q6ZNM6 134 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 HIST1H2BLQ99880 126 aa11.11□□□□□ -0.63
CCNA1-203ENST00000625767 FAT2Q9NYQ8 4349 aa11.1□□□□□ -0.63
CCNA1-203ENST00000625767 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
CCNA1-203ENST00000625767 SPATA12Q7Z6I5 190 aa11.1□□□□□ -0.63
CCNA1-203ENST00000625767 CST9LQ9H4G1 147 aa11.09□□□□□ -0.63
CCNA1-203ENST00000625767 PRSS1P07477 247 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 NPSP0C0P6 89 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 IGKV2D-24A0A075B6R9 120 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 K7EP13 123 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 S100A2P29034 98 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 UBE2D1P51668 147 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 COX6A2Q02221 97 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 PMVKQ15126 192 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 MIAQ16674 131 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 KRTAP26-1Q6PEX3 210 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 HSPB8Q9UJY1 196 aa11.08□□□□□ -0.64
CCNA1-203ENST00000625767 TRAV8-3A0A0A6YYJ7 113 aa11.07□□□□□ -0.64
CCNA1-203ENST00000625767 CCL25O15444 150 aa11.07□□□□□ -0.64
CCNA1-203ENST00000625767 XCL1P47992 114 aa11.07□□□□□ -0.64
CCNA1-203ENST00000625767 CHCHD10Q8WYQ3 142 aaPredicted RBP11.07□□□□□ -0.64
CCNA1-203ENST00000625767 PMCHL2Q9BQD1 86 aa11.07□□□□□ -0.64
CCNA1-203ENST00000625767 A0A0J9YXV3 536 aa11.06□□□□□ -0.64
CCNA1-203ENST00000625767 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
CCNA1-203ENST00000625767 Q6ZRN7 208 aaPredicted RBP11.06□□□□□ -0.64
CCNA1-203ENST00000625767 MAPKAPK5-AS1Q8N8E1 139 aa11.06□□□□□ -0.64
CCNA1-203ENST00000625767 PAPPA-AS1Q5QFB9 102 aa11.05□□□□□ -0.64
CCNA1-203ENST00000625767 LINC00242Q5T6M2 205 aa11.05□□□□□ -0.64
CCNA1-203ENST00000625767 C2orf88Q9BSF0 95 aa11.05□□□□□ -0.64
CCNA1-203ENST00000625767 C1orf43Q9BWL3 253 aa11.05□□□□□ -0.64
CCNA1-203ENST00000625767 IGLV4-69A0A075B6H9 119 aa11.04□□□□□ -0.64
CCNA1-203ENST00000625767 C6orf223Q8N319 242 aa11.04□□□□□ -0.64
CCNA1-203ENST00000625767 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
CCNA1-203ENST00000625767 GAGE12HA6NDE8 117 aa11.04□□□□□ -0.64
CCNA1-203ENST00000625767 KRTDAPP60985 99 aa11.04□□□□□ -0.64
CCNA1-203ENST00000625767 ODF1Q14990 250 aa11.04□□□□□ -0.64
CCNA1-203ENST00000625767 SS18Q15532 418 aa11.04□□□□□ -0.64
CCNA1-203ENST00000625767 MAP1LC3CQ9BXW4 147 aa11.04□□□□□ -0.64
CCNA1-203ENST00000625767 MRPL35Q9NZE8 188 aaKnown RBP11.04□□□□□ -0.64
CCNA1-203ENST00000625767 SYS1-DBNDD2H3BUS1 97 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms