RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 TNFRSF6BO95407 300 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 SMIM17P0DL12 118 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 ESDP10768 282 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 RPL36AP83881 106 aaKnown RBP3.89□□□□□ -1.79
LINC00963-215ENST00000622972 WFDC2Q14508 124 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 IQCJQ1A5X6 159 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 SVBPQ8N300 66 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 Q8N976 141 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 RPL36ALQ969Q0 106 aaKnown RBP3.89□□□□□ -1.79
LINC00963-215ENST00000622972 MRAP2Q96G30 205 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 URB1-AS1Q96HZ7 61 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 BTF3L4Q96K17 158 aa3.89□□□□□ -1.79
LINC00963-215ENST00000622972 IGLV4-60A0A075B6I1 120 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 TRBV24-1A0A075B6N3 115 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 IGKV2D-24A0A075B6R9 120 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 TRAV9-1A0A075B6T8 112 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 A0A087WX48 190 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 TRBV27A0A0K0K1C4 114 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 A0A1B0GW15 77 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 SNAPINO95295 136 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 GAGE6Q13070 117 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 LAGE3Q14657 143 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 KRTAP26-1Q6PEX3 210 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 C20orf203Q8NBC4 194 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 BORCS7Q96B45 105 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 RMI2Q96E14 147 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 COX11Q9Y6N1 276 aa3.88□□□□□ -1.79
LINC00963-215ENST00000622972 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.87□□□□□ -1.79
LINC00963-215ENST00000622972 IGKV2-29A2NJV5 120 aaPredicted RBP3.87□□□□□ -1.79
LINC00963-215ENST00000622972 COLCA2A8K830 154 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 TMEM262E9PQX1 116 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 H7C1H1 209 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 ATP6V1G1O75348 118 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 SUMO2P61956 95 aaKnown RBP3.87□□□□□ -1.79
LINC00963-215ENST00000622972 RBX1P62877 108 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 ENHOQ6UWT2 76 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.87□□□□□ -1.79
LINC00963-215ENST00000622972 BAALCQ8WXS3 180 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 UBE2WQ96B02 151 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 PRELID3AQ96N28 172 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 ALKBH7Q9BT30 221 aaPredicted RBP3.87□□□□□ -1.79
LINC00963-215ENST00000622972 SMIM2Q9BVW6 85 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 KLK12Q9UKR0 248 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 HSPG2P98160 4391 aa3.87□□□□□ -1.79
LINC00963-215ENST00000622972 A0A096LNJ9 63 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 IGHV1-24A0A0C4DH33 117 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 PRSS47A8MTI9 375 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 TCAPO15273 167 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 CRPP02741 224 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 NPSP0C0P6 89 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 CKS2P33552 79 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 RPL39P62891 51 aaKnown RBP3.86□□□□□ -1.79
LINC00963-215ENST00000622972 RPL32P62910 135 aaKnown RBP3.86□□□□□ -1.79
LINC00963-215ENST00000622972 NDUFA5Q16718 116 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 CLPSL2Q6UWE3 100 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 SMIM15Q7Z3B0 74 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 ORMDL3Q8N138 153 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 GNB1LQ9BYB4 327 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 ST20Q9HBF5 79 aa3.86□□□□□ -1.79
LINC00963-215ENST00000622972 I3L3M4 83 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 HLA-DQA1P01909 254 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 AMTP48728 403 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 LINC01620Q4KN68 170 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 SVIPQ8NHG7 77 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 OPRPNQ99935 248 aaPredicted RBP3.85□□□□□ -1.79
LINC00963-215ENST00000622972 C20orf78Q9BR46 151 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 CHCHD5Q9BSY4 110 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 TMEM243Q9BU79 118 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 PRR34Q9NV39 138 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
LINC00963-215ENST00000622972 TRBV25-1A0A075B6N4 114 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 LOC389332A0A1B0GUA5 103 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 LINC01546A6NGU7 62 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 APCSP02743 223 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 PPBPP02775 128 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 ANGP03950 147 aaKnown RBP3.84□□□□□ -1.79
LINC00963-215ENST00000622972 S100A8P05109 93 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 FGF6P10767 208 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 S100PP25815 95 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.79
LINC00963-215ENST00000622972 Q0VG73 95 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 FABP9Q0Z7S8 132 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 COTL1Q14019 142 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
LINC00963-215ENST00000622972 ZC2HC1BQ5TFG8 222 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 Q6ZUT4 128 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 C18orf32Q8TCD1 76 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 SMCO4Q9NRQ5 59 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 UBE2D4Q9Y2X8 147 aa3.84□□□□□ -1.79
LINC00963-215ENST00000622972 VPS13BQ7Z7G8 4022 aa3.84□□□□□ -1.8
LINC00963-215ENST00000622972 VCYO14598 125 aa3.83□□□□□ -1.8
LINC00963-215ENST00000622972 PMCHP20382 165 aa3.83□□□□□ -1.8
LINC00963-215ENST00000622972 C14orf177Q52M58 125 aa3.83□□□□□ -1.8
LINC00963-215ENST00000622972 LINC00173Q6ZV60 143 aa3.83□□□□□ -1.8
LINC00963-215ENST00000622972 MRPL52Q86TS9 123 aaKnown RBP3.83□□□□□ -1.8
LINC00963-215ENST00000622972 LINC00269Q8N2A0 174 aa3.83□□□□□ -1.8
LINC00963-215ENST00000622972 Q8N8P6 123 aa3.83□□□□□ -1.8
LINC00963-215ENST00000622972 IGLV10-54A0A075B6I4 117 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms