RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PYGO1Q9Y3Y4 419 aa13.42□□□□□ -0.26
PDLIM2-221ENST00000622702 NBDYA0A0U1RRE5 68 aa13.41□□□□□ -0.26
PDLIM2-221ENST00000622702 HBDP02042 147 aa13.41□□□□□ -0.26
PDLIM2-221ENST00000622702 OR5A1Q8NGJ0 315 aa13.41□□□□□ -0.26
PDLIM2-221ENST00000622702 TMEM101Q96IK0 257 aa13.41□□□□□ -0.26
PDLIM2-221ENST00000622702 NUPR1O60356 82 aa13.4□□□□□ -0.26
PDLIM2-221ENST00000622702 DGAT2L7PQ6IED9 249 aa13.4□□□□□ -0.26
PDLIM2-221ENST00000622702 Q6ZR54 194 aa13.4□□□□□ -0.26
PDLIM2-221ENST00000622702 FRAS1Q86XX4 4008 aa13.4□□□□□ -0.27
PDLIM2-221ENST00000622702 IGIPA6NJ69 53 aa13.39□□□□□ -0.27
PDLIM2-221ENST00000622702 ANGP03950 147 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-221ENST00000622702 PMCHL1Q16048 86 aa13.39□□□□□ -0.27
PDLIM2-221ENST00000622702 KRTAP1-5Q9BYS1 174 aa13.39□□□□□ -0.27
PDLIM2-221ENST00000622702 CDC42SE2Q9NRR3 84 aa13.39□□□□□ -0.27
PDLIM2-221ENST00000622702 NPSP0C0P6 89 aa13.38□□□□□ -0.27
PDLIM2-221ENST00000622702 NDUFA6P56556 154 aa13.38□□□□□ -0.27
PDLIM2-221ENST00000622702 MRPS36P82909 103 aaKnown RBP13.38□□□□□ -0.27
PDLIM2-221ENST00000622702 KLK12Q9UKR0 248 aa13.38□□□□□ -0.27
PDLIM2-221ENST00000622702 IBA57-AS1B1ANH7 110 aa13.37□□□□□ -0.27
PDLIM2-221ENST00000622702 ERASQ7Z444 233 aa13.37□□□□□ -0.27
PDLIM2-221ENST00000622702 FAM104AQ969W3 186 aa13.37□□□□□ -0.27
PDLIM2-221ENST00000622702 TIMM17AQ99595 171 aa13.37□□□□□ -0.27
PDLIM2-221ENST00000622702 PDZD11Q5EBL8 140 aa13.36□□□□□ -0.27
PDLIM2-221ENST00000622702 FAM19A2Q8N3H0 131 aa13.36□□□□□ -0.27
PDLIM2-221ENST00000622702 ZNF664Q8N3J9 261 aa13.36□□□□□ -0.27
PDLIM2-221ENST00000622702 SCGB3A1Q96QR1 104 aa13.36□□□□□ -0.27
PDLIM2-221ENST00000622702 PRR34Q9NV39 138 aa13.36□□□□□ -0.27
PDLIM2-221ENST00000622702 Q6ZUT4 128 aa13.36□□□□□ -0.27
PDLIM2-221ENST00000622702 LINC00269Q8N2A0 174 aa13.36□□□□□ -0.27
PDLIM2-221ENST00000622702 IGLV4-3A0A075B6K6 122 aa13.35□□□□□ -0.27
PDLIM2-221ENST00000622702 TMEM141Q96I45 108 aa13.35□□□□□ -0.27
PDLIM2-221ENST00000622702 REG3AQ06141 175 aa13.34□□□□□ -0.27
PDLIM2-221ENST00000622702 UBE2WQ96B02 151 aa13.34□□□□□ -0.27
PDLIM2-221ENST00000622702 OPRPNQ99935 248 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-221ENST00000622702 DNAH17Q9UFH2 4485 aa13.33□□□□□ -0.27
PDLIM2-221ENST00000622702 ENHOQ6UWT2 76 aa13.33□□□□□ -0.28
PDLIM2-221ENST00000622702 FAT2Q9NYQ8 4349 aa13.33□□□□□ -0.28
PDLIM2-221ENST00000622702 EPPK1P58107 5090 aaKnown RBP13.32□□□□□ -0.28
PDLIM2-221ENST00000622702 TRAV8-3A0A0A6YYJ7 113 aa13.32□□□□□ -0.28
PDLIM2-221ENST00000622702 ATP5LO75964 103 aa13.32□□□□□ -0.28
PDLIM2-221ENST00000622702 CRPP02741 224 aa13.32□□□□□ -0.28
PDLIM2-221ENST00000622702 PAPPA-AS1Q5QFB9 102 aa13.32□□□□□ -0.28
PDLIM2-221ENST00000622702 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.31□□□□□ -0.28
PDLIM2-221ENST00000622702 MIAQ16674 131 aa13.31□□□□□ -0.28
PDLIM2-221ENST00000622702 C1orf134Q5TEV5 83 aa13.31□□□□□ -0.28
PDLIM2-221ENST00000622702 CLPSL2Q6UWE3 100 aa13.31□□□□□ -0.28
PDLIM2-221ENST00000622702 Q6ZN92 141 aa13.31□□□□□ -0.28
PDLIM2-221ENST00000622702 S100A6P06703 90 aa13.3□□□□□ -0.28
PDLIM2-221ENST00000622702 RNASE13Q5GAN3 156 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-221ENST00000622702 AMELXQ99217 191 aa13.3□□□□□ -0.28
PDLIM2-221ENST00000622702 RTL8CO15255 209 aa13.29□□□□□ -0.28
PDLIM2-221ENST00000622702 LEPROTL1O95214 131 aa13.29□□□□□ -0.28
PDLIM2-221ENST00000622702 VCX2Q9H322 139 aa13.29□□□□□ -0.28
PDLIM2-221ENST00000622702 TEX43Q6ZNM6 134 aa13.29□□□□□ -0.28
PDLIM2-221ENST00000622702 LINC00173Q6ZV60 143 aa13.29□□□□□ -0.28
PDLIM2-221ENST00000622702 TRAV8-4A0A0B4J246 113 aa13.28□□□□□ -0.28
PDLIM2-221ENST00000622702 C6orf223Q8N319 242 aa13.28□□□□□ -0.28
PDLIM2-221ENST00000622702 PACRGQ96M98 296 aaPredicted RBP13.28□□□□□ -0.28
PDLIM2-221ENST00000622702 Q9HAA7 133 aa13.28□□□□□ -0.28
PDLIM2-221ENST00000622702 IGKV3OR2-268A0A0C4DH90 116 aa13.27□□□□□ -0.29
PDLIM2-221ENST00000622702 LINC00959A0A1B0GUT2 108 aa13.27□□□□□ -0.29
PDLIM2-221ENST00000622702 NFE4Q86UQ8 179 aa13.27□□□□□ -0.29
PDLIM2-221ENST00000622702 BAALCQ8WXS3 180 aa13.27□□□□□ -0.29
PDLIM2-221ENST00000622702 IFI27L1Q96BM0 104 aa13.27□□□□□ -0.29
PDLIM2-221ENST00000622702 HSPB8Q9UJY1 196 aa13.27□□□□□ -0.29
PDLIM2-221ENST00000622702 IFITM10A6NMD0 228 aa13.26□□□□□ -0.29
PDLIM2-221ENST00000622702 CCL25O15444 150 aa13.26□□□□□ -0.29
PDLIM2-221ENST00000622702 LINC00336Q6ZUF6 198 aa13.26□□□□□ -0.29
PDLIM2-221ENST00000622702 RMI2Q96E14 147 aa13.26□□□□□ -0.29
PDLIM2-221ENST00000622702 C2orf88Q9BSF0 95 aa13.26□□□□□ -0.29
PDLIM2-221ENST00000622702 FABP4P15090 132 aa13.25□□□□□ -0.29
PDLIM2-221ENST00000622702 ZC2HC1BQ5TFG8 222 aa13.25□□□□□ -0.29
PDLIM2-221ENST00000622702 HIST3H2BBQ8N257 126 aa13.25□□□□□ -0.29
PDLIM2-221ENST00000622702 TRAV13-1A0A0B4J241 112 aa13.24□□□□□ -0.29
PDLIM2-221ENST00000622702 PMVKQ15126 192 aa13.24□□□□□ -0.29
PDLIM2-221ENST00000622702 SS18Q15532 418 aa13.24□□□□□ -0.29
PDLIM2-221ENST00000622702 C1orf43Q9BWL3 253 aa13.24□□□□□ -0.29
PDLIM2-221ENST00000622702 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
PDLIM2-221ENST00000622702 C5orf52A6NGY3 159 aa13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 PRSS29PA6NIE9 313 aa13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 IGLV10-54A0A075B6I4 117 aa13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 IGKV2D-24A0A075B6R9 120 aa13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 UBE2D1P51668 147 aa13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 Q6ZRN7 208 aaPredicted RBP13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 CHCHD10Q8WYQ3 142 aaPredicted RBP13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 TM2D2Q9BX73 214 aa13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 HECTD4Q9Y4D8 3996 aa13.23□□□□□ -0.29
PDLIM2-221ENST00000622702 PKD1P98161 4303 aa13.22□□□□□ -0.29
PDLIM2-221ENST00000622702 PRSS1P07477 247 aa13.22□□□□□ -0.29
PDLIM2-221ENST00000622702 KRTAP26-1Q6PEX3 210 aa13.22□□□□□ -0.29
PDLIM2-221ENST00000622702 TMA7Q9Y2S6 64 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-221ENST00000622702 FAM19A3Q7Z5A8 133 aa13.21□□□□□ -0.3
PDLIM2-221ENST00000622702 TRAV12-1A0A0B4J245 112 aa13.2□□□□□ -0.3
PDLIM2-221ENST00000622702 S100A2P29034 98 aa13.2□□□□□ -0.3
PDLIM2-221ENST00000622702 LINC00242Q5T6M2 205 aa13.19□□□□□ -0.3
PDLIM2-221ENST00000622702 HIST1H2BLQ99880 126 aa13.19□□□□□ -0.3
PDLIM2-221ENST00000622702 MAP1LC3CQ9BXW4 147 aa13.19□□□□□ -0.3
PDLIM2-221ENST00000622702 XCL1P47992 114 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms