RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 DKK4Q9UBT3 224 aa9.82□□□□□ -0.84
COL1A2-213ENST00000620463 LINC01356Q8N9X3 169 aa9.81□□□□□ -0.84
COL1A2-213ENST00000620463 IGHV4OR15-8A0A075B7B6 117 aa9.81□□□□□ -0.84
COL1A2-213ENST00000620463 A0A087WW49 117 aa9.81□□□□□ -0.84
COL1A2-213ENST00000620463 CCDC140Q96MF4 163 aa9.81□□□□□ -0.84
COL1A2-213ENST00000620463 IGLV4-69A0A075B6H9 119 aa9.81□□□□□ -0.84
COL1A2-213ENST00000620463 IGF2-ASQ6U949 168 aa9.81□□□□□ -0.84
COL1A2-213ENST00000620463 APRG1Q8IVJ8 170 aa9.81□□□□□ -0.84
COL1A2-213ENST00000620463 TRBV6-5A0A0K0K1A5 114 aa9.8□□□□□ -0.84
COL1A2-213ENST00000620463 DIRC1Q969H9 104 aa9.8□□□□□ -0.84
COL1A2-213ENST00000620463 TRAV7A0A075B6U4 112 aa9.8□□□□□ -0.84
COL1A2-213ENST00000620463 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
COL1A2-213ENST00000620463 EXPH5Q8NEV8 1989 aa9.79□□□□□ -0.84
COL1A2-213ENST00000620463 RNASE3P12724 160 aaKnown RBP9.79□□□□□ -0.84
COL1A2-213ENST00000620463 MIFP14174 115 aa9.79□□□□□ -0.84
COL1A2-213ENST00000620463 PRR9Q5T870 116 aa9.79□□□□□ -0.84
COL1A2-213ENST00000620463 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
COL1A2-213ENST00000620463 PYGO1Q9Y3Y4 419 aa9.79□□□□□ -0.84
COL1A2-213ENST00000620463 LINC01548A6NM66 108 aa9.79□□□□□ -0.84
COL1A2-213ENST00000620463 TSHBP01222 138 aa9.79□□□□□ -0.84
COL1A2-213ENST00000620463 RPS28P62857 69 aaKnown RBP9.79□□□□□ -0.84
COL1A2-213ENST00000620463 CLPSL1A2RUU4 121 aa9.78□□□□□ -0.84
COL1A2-213ENST00000620463 J3QLI3 93 aa9.78□□□□□ -0.84
COL1A2-213ENST00000620463 PRRC2AP48634 2157 aaKnown RBP9.78□□□□□ -0.84
COL1A2-213ENST00000620463 HIVEP2P31629 2446 aa9.78□□□□□ -0.84
COL1A2-213ENST00000620463 PRR4Q16378 134 aa9.78□□□□□ -0.84
COL1A2-213ENST00000620463 KIR2DL5BQ8NHK3 375 aa9.78□□□□□ -0.84
COL1A2-213ENST00000620463 HIVEP3Q5T1R4 2406 aa9.78□□□□□ -0.84
COL1A2-213ENST00000620463 CRYGAP11844 174 aa9.78□□□□□ -0.84
COL1A2-213ENST00000620463 PMAIP1Q13794 54 aa9.78□□□□□ -0.84
COL1A2-213ENST00000620463 SMIM11BQ8TCY0 68 aa9.77□□□□□ -0.84
COL1A2-213ENST00000620463 ZFAND3Q9H8U3 227 aa9.77□□□□□ -0.85
COL1A2-213ENST00000620463 IGLV2-18A0A075B6J9 118 aa9.77□□□□□ -0.85
COL1A2-213ENST00000620463 LRCOL1A6NCL2 159 aa9.77□□□□□ -0.85
COL1A2-213ENST00000620463 LTBP2Q14767 1821 aa9.77□□□□□ -0.85
COL1A2-213ENST00000620463 C5orf56Q8N8D9 126 aa9.76□□□□□ -0.85
COL1A2-213ENST00000620463 ANKRD11Q6UB99 2663 aaPredicted RBP9.76□□□□□ -0.85
COL1A2-213ENST00000620463 C6orf99Q4VX62 202 aa9.76□□□□□ -0.85
COL1A2-213ENST00000620463 NDUFS5O43920 106 aa9.75□□□□□ -0.85
COL1A2-213ENST00000620463 ZNF580Q9UK33 172 aa9.75□□□□□ -0.85
COL1A2-213ENST00000620463 DEFB136Q30KP8 78 aa9.75□□□□□ -0.85
COL1A2-213ENST00000620463 ADAMTSL4-AS1Q5T5F5 129 aa9.75□□□□□ -0.85
COL1A2-213ENST00000620463 IBA57-AS1B1ANH7 110 aa9.75□□□□□ -0.85
COL1A2-213ENST00000620463 ZNF462Q96JM2 2506 aa9.75□□□□□ -0.85
COL1A2-213ENST00000620463 K7EMT4 169 aa9.75□□□□□ -0.85
COL1A2-213ENST00000620463 WISP2O76076 250 aa9.74□□□□□ -0.85
COL1A2-213ENST00000620463 PROK1P58294 105 aa9.74□□□□□ -0.85
COL1A2-213ENST00000620463 SIRPDQ9H106 197 aa9.74□□□□□ -0.85
COL1A2-213ENST00000620463 GYPEP15421 78 aa9.74□□□□□ -0.85
COL1A2-213ENST00000620463 ETDCA0A1B0GVM5 59 aa9.74□□□□□ -0.85
COL1A2-213ENST00000620463 ZFYVE26Q68DK2 2539 aa9.73□□□□□ -0.85
COL1A2-213ENST00000620463 COX7BP24311 80 aa9.73□□□□□ -0.85
COL1A2-213ENST00000620463 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
COL1A2-213ENST00000620463 A6NED7 52 aa9.73□□□□□ -0.85
COL1A2-213ENST00000620463 CCKP06307 115 aa9.73□□□□□ -0.85
COL1A2-213ENST00000620463 UBE2BP63146 152 aa9.73□□□□□ -0.85
COL1A2-213ENST00000620463 CAMK2N2Q96S95 79 aa9.73□□□□□ -0.85
COL1A2-213ENST00000620463 SPAG11BQ08648 103 aa9.72□□□□□ -0.85
COL1A2-213ENST00000620463 LINC00846Q9NV44 126 aa9.72□□□□□ -0.85
COL1A2-213ENST00000620463 CHKB-CPT1BH3BT56 60 aa9.72□□□□□ -0.85
COL1A2-213ENST00000620463 J3QKU1 62 aa9.72□□□□□ -0.85
COL1A2-213ENST00000620463 FSTL3O95633 263 aa9.72□□□□□ -0.85
COL1A2-213ENST00000620463 SEM1Q6ZVN7 128 aa9.72□□□□□ -0.85
COL1A2-213ENST00000620463 FAM19A1Q7Z5A9 133 aa9.72□□□□□ -0.85
COL1A2-213ENST00000620463 NHLRC4P0CG21 123 aaPredicted RBP9.72□□□□□ -0.85
COL1A2-213ENST00000620463 FASNP49327 2511 aaKnown RBP9.71□□□□□ -0.85
COL1A2-213ENST00000620463 A0A1W2PNU3 283 aaPredicted RBP9.71□□□□□ -0.85
COL1A2-213ENST00000620463 SLURP1P55000 103 aa9.71□□□□□ -0.86
COL1A2-213ENST00000620463 SBSPONQ8IVN8 264 aa9.71□□□□□ -0.86
COL1A2-213ENST00000620463 RNF223E7ERA6 249 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 FHL3Q13643 280 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 Q6ZQY7 126 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 TLN2Q9Y4G6 2542 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 HILS1P60008 231 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 GPHB5Q86YW7 130 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 MAPK1IP1LQ8NDC0 245 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 RMI2Q96E14 147 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 JMJD1CQ15652 2540 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 CRYGDP07320 174 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 C22orf34Q6ZV56 151 aa9.7□□□□□ -0.86
COL1A2-213ENST00000620463 UBE2D4Q9Y2X8 147 aa9.69□□□□□ -0.86
COL1A2-213ENST00000620463 IGHV4-59P01825 116 aa9.69□□□□□ -0.86
COL1A2-213ENST00000620463 PSMG3-AS1Q96PY0 264 aa9.69□□□□□ -0.86
COL1A2-213ENST00000620463 TRBV7-6A0A0J9YX20 115 aa9.68□□□□□ -0.86
COL1A2-213ENST00000620463 GRNP28799 593 aaKnown RBP9.68□□□□□ -0.86
COL1A2-213ENST00000620463 LYRM9A8MSI8 78 aa9.67□□□□□ -0.86
COL1A2-213ENST00000620463 RPL28P46779 137 aaKnown RBP9.67□□□□□ -0.86
COL1A2-213ENST00000620463 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
COL1A2-213ENST00000620463 COX8CQ7Z4L0 72 aa9.67□□□□□ -0.86
COL1A2-213ENST00000620463 Q8N3U1 123 aa9.67□□□□□ -0.86
COL1A2-213ENST00000620463 C16orf74Q96GX8 76 aa9.67□□□□□ -0.86
COL1A2-213ENST00000620463 TET2Q6N021 2002 aaPredicted RBP9.67□□□□□ -0.86
COL1A2-213ENST00000620463 A0A087WYN8 130 aa9.66□□□□□ -0.86
COL1A2-213ENST00000620463 PSPHP1O15172 72 aa9.66□□□□□ -0.86
COL1A2-213ENST00000620463 CCL18P55774 89 aa9.66□□□□□ -0.86
COL1A2-213ENST00000620463 EBI3Q14213 229 aa9.66□□□□□ -0.86
COL1A2-213ENST00000620463 ZFP36P26651 326 aaKnown RBP9.66□□□□□ -0.86
COL1A2-213ENST00000620463 NTM-AS1Q6ZSK4 140 aa9.66□□□□□ -0.86
COL1A2-213ENST00000620463 PRORYQ9H606 182 aa9.66□□□□□ -0.86
COL1A2-213ENST00000620463 IGHV4-38-2P0DP08 117 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms