RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 X6R8D5 127 aa15.23■□□□□ 0.03
SGMS1-210ENST00000619438 Q8NAQ8 132 aa15.22■□□□□ 0.03
SGMS1-210ENST00000619438 FXYD2P54710 66 aa15.22■□□□□ 0.03
SGMS1-210ENST00000619438 OR4C5Q8NGB2 326 aa15.22■□□□□ 0.03
SGMS1-210ENST00000619438 AMELXQ99217 191 aa15.22■□□□□ 0.03
SGMS1-210ENST00000619438 LYSTQ99698 3801 aa15.22■□□□□ 0.03
SGMS1-210ENST00000619438 CHCHD7Q9BUK0 85 aa15.22■□□□□ 0.03
SGMS1-210ENST00000619438 VCX2Q9H322 139 aa15.22■□□□□ 0.03
SGMS1-210ENST00000619438 C16orf74Q96GX8 76 aa15.21■□□□□ 0.03
SGMS1-210ENST00000619438 OPRPNQ99935 248 aaPredicted RBP15.21■□□□□ 0.03
SGMS1-210ENST00000619438 SPANXA1Q9NS26 97 aa15.21■□□□□ 0.03
SGMS1-210ENST00000619438 Q9UF83 564 aa15.21■□□□□ 0.03
SGMS1-210ENST00000619438 TRBV7-3A0A075B6L6 115 aa15.2■□□□□ 0.02
SGMS1-210ENST00000619438 TRGV1A0A0A0MS02 117 aa15.2■□□□□ 0.02
SGMS1-210ENST00000619438 TRAV4A0A0B4J268 109 aa15.2■□□□□ 0.02
SGMS1-210ENST00000619438 TRBV10-1A0A0K0K1A3 114 aa15.2■□□□□ 0.02
SGMS1-210ENST00000619438 SMIM13P0DJ93 91 aa15.2■□□□□ 0.02
SGMS1-210ENST00000619438 NANOS2P60321 138 aaKnown RBP15.2■□□□□ 0.02
SGMS1-210ENST00000619438 FAM104AQ969W3 186 aa15.2■□□□□ 0.02
SGMS1-210ENST00000619438 EMP1P54849 157 aa15.19■□□□□ 0.02
SGMS1-210ENST00000619438 AMMECR1LQ6DCA0 310 aa15.19■□□□□ 0.02
SGMS1-210ENST00000619438 NUPR2A6NF83 97 aa15.19■□□□□ 0.02
SGMS1-210ENST00000619438 ZNF815PA8K554 130 aa15.19■□□□□ 0.02
SGMS1-210ENST00000619438 CIDEAO60543 219 aa15.19■□□□□ 0.02
SGMS1-210ENST00000619438 COTL1Q14019 142 aa15.19■□□□□ 0.02
SGMS1-210ENST00000619438 TMEM170BQ5T4T1 132 aa15.19■□□□□ 0.02
SGMS1-210ENST00000619438 PLAC8L1A1L4L8 177 aa15.17■□□□□ 0.02
SGMS1-210ENST00000619438 SMIM9A6NGZ8 99 aa15.17■□□□□ 0.02
SGMS1-210ENST00000619438 CEMP1Q6PRD7 247 aaPredicted RBP15.17■□□□□ 0.02
SGMS1-210ENST00000619438 Q6ZTI0 123 aa15.17■□□□□ 0.02
SGMS1-210ENST00000619438 PHLDA1Q8WV24 401 aaPredicted RBP15.17■□□□□ 0.02
SGMS1-210ENST00000619438 HIST1H4GQ99525 98 aa15.17■□□□□ 0.02
SGMS1-210ENST00000619438 UBE2D4Q9Y2X8 147 aa15.17■□□□□ 0.02
SGMS1-210ENST00000619438 KLK5Q9Y337 293 aaPredicted RBP15.17■□□□□ 0.02
SGMS1-210ENST00000619438 DYNC2H1Q8NCM8 4307 aaKnown RBP15.16■□□□□ 0.02
SGMS1-210ENST00000619438 TMEM223A0PJW6 202 aa15.16■□□□□ 0.02
SGMS1-210ENST00000619438 MRPS36P82909 103 aaKnown RBP15.16■□□□□ 0.02
SGMS1-210ENST00000619438 ZNF479Q96JC4 524 aa15.16■□□□□ 0.02
SGMS1-210ENST00000619438 TIMM21Q9BVV7 248 aa15.16■□□□□ 0.02
SGMS1-210ENST00000619438 K7EP13 123 aa15.15■□□□□ 0.02
SGMS1-210ENST00000619438 ZNF22P17026 224 aaPredicted RBP15.15■□□□□ 0.02
SGMS1-210ENST00000619438 K7EQD1 137 aa15.14■□□□□ 0.01
SGMS1-210ENST00000619438 LEPROTO15243 131 aa15.14■□□□□ 0.01
SGMS1-210ENST00000619438 A0A1B0GWB2 263 aa15.13■□□□□ 0.01
SGMS1-210ENST00000619438 H3BUT2 72 aa15.13■□□□□ 0.01
SGMS1-210ENST00000619438 RPL36AP83881 106 aaKnown RBP15.13■□□□□ 0.01
SGMS1-210ENST00000619438 RRN3P1Q2M238 152 aa15.13■□□□□ 0.01
SGMS1-210ENST00000619438 RPL36ALQ969Q0 106 aaKnown RBP15.13■□□□□ 0.01
SGMS1-210ENST00000619438 NOP10Q9NPE3 64 aaKnown RBP15.13■□□□□ 0.01
SGMS1-210ENST00000619438 A0A0J9YXV3 536 aa15.12■□□□□ 0.01
SGMS1-210ENST00000619438 J3QQQ9 107 aa15.12■□□□□ 0.01
SGMS1-210ENST00000619438 SCGB1D4Q6XE38 83 aa15.12■□□□□ 0.01
SGMS1-210ENST00000619438 TSPEAR-AS2P59090 65 aa15.12■□□□□ 0.01
SGMS1-210ENST00000619438 DAZ4Q86SG3 579 aaKnown RBP15.12■□□□□ 0.01
SGMS1-210ENST00000619438 OR5A1Q8NGJ0 315 aa15.12■□□□□ 0.01
SGMS1-210ENST00000619438 DAZ3Q9NR90 486 aaKnown RBP15.12■□□□□ 0.01
SGMS1-210ENST00000619438 NHP2Q9NX24 153 aaKnown RBP15.12■□□□□ 0.01
SGMS1-210ENST00000619438 A0A0J9YY99 117 aa15.11■□□□□ 0.01
SGMS1-210ENST00000619438 LCE6AA0A183 80 aa15.11■□□□□ 0.01
SGMS1-210ENST00000619438 A0A1W2PPM0 123 aa15.11■□□□□ 0.01
SGMS1-210ENST00000619438 GTF2H5Q6ZYL4 71 aa15.11■□□□□ 0.01
SGMS1-210ENST00000619438 RAB37Q96AX2 223 aa15.11■□□□□ 0.01
SGMS1-210ENST00000619438 PLEKHB2Q96CS7 222 aa15.11■□□□□ 0.01
SGMS1-210ENST00000619438 SPANXB1Q9NS25 103 aaPredicted RBP15.11■□□□□ 0.01
SGMS1-210ENST00000619438 SPART-AS1P0CW21 52 aa15.1■□□□□ 0.01
SGMS1-210ENST00000619438 IGHV3-38A0A0C4DH36 116 aa15.09■□□□□ 0.01
SGMS1-210ENST00000619438 TINCRA0A1B0GVN0 87 aa15.09■□□□□ 0.01
SGMS1-210ENST00000619438 GAGE10A6NGK3 116 aa15.09■□□□□ 0.01
SGMS1-210ENST00000619438 LGALS3P17931 250 aaKnown RBP15.09■□□□□ 0.01
SGMS1-210ENST00000619438 UBE2D3P61077 147 aa15.09■□□□□ 0.01
SGMS1-210ENST00000619438 UBE2D2P62837 147 aa15.09■□□□□ 0.01
SGMS1-210ENST00000619438 C12orf74Q32Q52 190 aa15.09■□□□□ 0.01
SGMS1-210ENST00000619438 SLC25A29Q8N8R3 303 aa15.09■□□□□ 0.01
SGMS1-210ENST00000619438 CELA1Q9UNI1 258 aa15.09■□□□□ 0.01
SGMS1-210ENST00000619438 SACSQ9NZJ4 4579 aa15.09■□□□□ 0.01
SGMS1-210ENST00000619438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.09■□□□□ 0.01
SGMS1-210ENST00000619438 IGKV2-29A2NJV5 120 aaPredicted RBP15.09■□□□□ 0.01
SGMS1-210ENST00000619438 K7EP34 96 aa15.08■□□□□ 0
SGMS1-210ENST00000619438 Q6ZTC4 211 aa15.08■□□□□ 0
SGMS1-210ENST00000619438 TMEM238LA0A1B0GVL6 79 aa15.07■□□□□ 0
SGMS1-210ENST00000619438 TRBV6-4A0A1B0GX49 114 aa15.07■□□□□ 0
SGMS1-210ENST00000619438 A6NJY4 79 aa15.07■□□□□ 0
SGMS1-210ENST00000619438 CSDC2Q9Y534 153 aaKnown RBP15.07■□□□□ 0
SGMS1-210ENST00000619438 RYR2Q92736 4967 aa15.07■□□□□ 0
SGMS1-210ENST00000619438 K7ERJ3 54 aa15.06■□□□□ 0
SGMS1-210ENST00000619438 FABP2P12104 132 aa15.06■□□□□ 0
SGMS1-210ENST00000619438 Q6ZUT4 128 aa15.06■□□□□ 0
SGMS1-210ENST00000619438 GTSF1LQ9H1H1 148 aa15.06■□□□□ 0
SGMS1-210ENST00000619438 TRGV2A0A075B6R0 118 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 TRAV10A0A0B4J240 114 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 GAGE12BA1L429 117 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 IGLL5B9A064 214 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 GAGE7O76087 117 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 GAGE12FP0CL80 117 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 GAGE12GP0CL81 117 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 GAGE12IP0CL82 117 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 SMAGPQ0VAQ4 97 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 SRSF9Q13242 221 aaKnown RBP eCLIP15.05■□□□□ -0
SGMS1-210ENST00000619438 FAM222AQ5U5X8 452 aa15.05■□□□□ -0
SGMS1-210ENST00000619438 TEX48A0A1B0GUV7 120 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms