RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 IGHV3-64A0A075B6Q5 118 aa12.21□□□□□ -0.45
SEMA3B-213ENST00000618865 C4orf26Q17RF5 130 aa12.21□□□□□ -0.45
SEMA3B-213ENST00000618865 ODF3L2Q3SX64 289 aa12.21□□□□□ -0.45
SEMA3B-213ENST00000618865 MTORP42345 2549 aa12.21□□□□□ -0.45
SEMA3B-213ENST00000618865 A0A0J9YXV3 536 aa12.21□□□□□ -0.46
SEMA3B-213ENST00000618865 CFAP126Q5VTH2 177 aa12.21□□□□□ -0.46
SEMA3B-213ENST00000618865 ZNF415Q09FC8 603 aa12.2□□□□□ -0.46
SEMA3B-213ENST00000618865 SRSF9Q13242 221 aaKnown RBP eCLIP12.2□□□□□ -0.46
SEMA3B-213ENST00000618865 RNASE13Q5GAN3 156 aaKnown RBP12.2□□□□□ -0.46
SEMA3B-213ENST00000618865 NFE4Q86UQ8 179 aa12.2□□□□□ -0.46
SEMA3B-213ENST00000618865 XCL2Q9UBD3 114 aa12.2□□□□□ -0.46
SEMA3B-213ENST00000618865 JMJD1CQ15652 2540 aa12.2□□□□□ -0.46
SEMA3B-213ENST00000618865 ZNF22P17026 224 aaPredicted RBP12.19□□□□□ -0.46
SEMA3B-213ENST00000618865 TMEM86BQ8N661 226 aa12.19□□□□□ -0.46
SEMA3B-213ENST00000618865 J3QQQ9 107 aa12.18□□□□□ -0.46
SEMA3B-213ENST00000618865 TMEM223A0PJW6 202 aa12.18□□□□□ -0.46
SEMA3B-213ENST00000618865 A8MWV9 139 aa12.18□□□□□ -0.46
SEMA3B-213ENST00000618865 SPANXA1Q9NS26 97 aa12.18□□□□□ -0.46
SEMA3B-213ENST00000618865 IGHV3-38A0A0C4DH36 116 aa12.17□□□□□ -0.46
SEMA3B-213ENST00000618865 NOTCH3Q9UM47 2321 aa12.17□□□□□ -0.46
SEMA3B-213ENST00000618865 IGHV3OR16-12A0A075B7B8 117 aa12.17□□□□□ -0.46
SEMA3B-213ENST00000618865 A0A0U1RRA0 63 aa12.17□□□□□ -0.46
SEMA3B-213ENST00000618865 INSP01308 110 aa12.17□□□□□ -0.46
SEMA3B-213ENST00000618865 KRTAP1-1Q07627 177 aa12.17□□□□□ -0.46
SEMA3B-213ENST00000618865 CCL24O00175 119 aa12.16□□□□□ -0.46
SEMA3B-213ENST00000618865 UBE2D1P51668 147 aa12.16□□□□□ -0.46
SEMA3B-213ENST00000618865 SFTA2Q6UW10 78 aa12.16□□□□□ -0.46
SEMA3B-213ENST00000618865 CHCHD7Q9BUK0 85 aa12.15□□□□□ -0.46
SEMA3B-213ENST00000618865 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.15□□□□□ -0.46
SEMA3B-213ENST00000618865 IGKV2-29A2NJV5 120 aaPredicted RBP12.15□□□□□ -0.46
SEMA3B-213ENST00000618865 IGHV3-30P01768 117 aa12.15□□□□□ -0.46
SEMA3B-213ENST00000618865 IGHV3-30-5P0DP03 117 aa12.15□□□□□ -0.46
SEMA3B-213ENST00000618865 LGALS3P17931 250 aaKnown RBP12.15□□□□□ -0.46
SEMA3B-213ENST00000618865 C1orf158Q8N1D5 194 aa12.15□□□□□ -0.46
SEMA3B-213ENST00000618865 TRAV4A0A0B4J268 109 aa12.14□□□□□ -0.47
SEMA3B-213ENST00000618865 SLC25A29Q8N8R3 303 aa12.14□□□□□ -0.47
SEMA3B-213ENST00000618865 SNCGO76070 127 aa12.14□□□□□ -0.47
SEMA3B-213ENST00000618865 KLK5Q9Y337 293 aaPredicted RBP12.14□□□□□ -0.47
SEMA3B-213ENST00000618865 LEPROTO15243 131 aa12.14□□□□□ -0.47
SEMA3B-213ENST00000618865 BEAN1Q3B7T3 259 aa12.13□□□□□ -0.47
SEMA3B-213ENST00000618865 LINC00467Q9BRT7 94 aa12.13□□□□□ -0.47
SEMA3B-213ENST00000618865 SMCPP49901 116 aaPredicted RBP12.13□□□□□ -0.47
SEMA3B-213ENST00000618865 STHQ8IWL8 128 aa12.13□□□□□ -0.47
SEMA3B-213ENST00000618865 PYGO1Q9Y3Y4 419 aa12.13□□□□□ -0.47
SEMA3B-213ENST00000618865 HELZ2Q9BYK8 2649 aaKnown RBP12.12□□□□□ -0.47
SEMA3B-213ENST00000618865 IGHV3-53P01767 116 aa12.12□□□□□ -0.47
SEMA3B-213ENST00000618865 ADARB2-AS1A8MUL3 147 aa12.12□□□□□ -0.47
SEMA3B-213ENST00000618865 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
SEMA3B-213ENST00000618865 UBE2D4Q9Y2X8 147 aa12.11□□□□□ -0.47
SEMA3B-213ENST00000618865 TRAV8-3A0A0A6YYJ7 113 aa12.11□□□□□ -0.47
SEMA3B-213ENST00000618865 LINC01006Q8NI28 216 aa12.11□□□□□ -0.47
SEMA3B-213ENST00000618865 WFDC10AQ9H1F0 79 aa12.11□□□□□ -0.47
SEMA3B-213ENST00000618865 CFC1BP0CG36 223 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 CFC1P0CG37 223 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 NDUFA11Q86Y39 141 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 C10orf126Q8N4M7 172 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 LOC107984156A0A0G2JMH3 177 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 ARL17AQ8IVW1 177 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 FAM236AA0A1B0GUQ0 79 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 FAM236BA0A1B0GV22 79 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 EIF4EBP3O60516 100 aaPredicted RBP12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 PSMB2P49721 201 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 HERVK_113P63121 156 aa12.1□□□□□ -0.47
SEMA3B-213ENST00000618865 A8MZ25 164 aa12.09□□□□□ -0.47
SEMA3B-213ENST00000618865 CRLF1O75462 422 aa12.09□□□□□ -0.47
SEMA3B-213ENST00000618865 TIRAPP58753 221 aa12.09□□□□□ -0.47
SEMA3B-213ENST00000618865 MRPS36P82909 103 aaKnown RBP12.09□□□□□ -0.47
SEMA3B-213ENST00000618865 ATP6V0E2Q8NHE4 81 aa12.09□□□□□ -0.47
SEMA3B-213ENST00000618865 TRGV1A0A0A0MS02 117 aa12.09□□□□□ -0.47
SEMA3B-213ENST00000618865 IGHV3-30-3P0DP02 117 aa12.09□□□□□ -0.47
SEMA3B-213ENST00000618865 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
SEMA3B-213ENST00000618865 CHCHD5Q9BSY4 110 aa12.08□□□□□ -0.48
SEMA3B-213ENST00000618865 UNC79Q9P2D8 2635 aa12.08□□□□□ -0.48
SEMA3B-213ENST00000618865 Q6ZTI0 123 aa12.07□□□□□ -0.48
SEMA3B-213ENST00000618865 GIG44P09565 113 aaPredicted RBP12.07□□□□□ -0.48
SEMA3B-213ENST00000618865 PRO0628Q9UI54 55 aa12.07□□□□□ -0.48
SEMA3B-213ENST00000618865 TIMM21Q9BVV7 248 aa12.06□□□□□ -0.48
SEMA3B-213ENST00000618865 C9orf153Q5TBE3 101 aa12.06□□□□□ -0.48
SEMA3B-213ENST00000618865 C2CD3Q4AC94 2353 aa12.05□□□□□ -0.48
SEMA3B-213ENST00000618865 A0A0J9YXY3 114 aa12.05□□□□□ -0.48
SEMA3B-213ENST00000618865 CARD19Q96LW7 228 aa12.05□□□□□ -0.48
SEMA3B-213ENST00000618865 MUSTN1Q8IVN3 82 aa12.05□□□□□ -0.48
SEMA3B-213ENST00000618865 MALP21145 153 aa12.04□□□□□ -0.48
SEMA3B-213ENST00000618865 UBE2D3P61077 147 aa12.04□□□□□ -0.48
SEMA3B-213ENST00000618865 UBE2D2P62837 147 aa12.04□□□□□ -0.48
SEMA3B-213ENST00000618865 NDUFA7O95182 113 aa12.04□□□□□ -0.48
SEMA3B-213ENST00000618865 RNASE1P07998 156 aaKnown RBP12.04□□□□□ -0.48
SEMA3B-213ENST00000618865 A0A1B0GX51 115 aa12.04□□□□□ -0.48
SEMA3B-213ENST00000618865 FASNP49327 2511 aaKnown RBP12.03□□□□□ -0.48
SEMA3B-213ENST00000618865 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.03□□□□□ -0.48
SEMA3B-213ENST00000618865 FAM236DA0A1B0GTK5 79 aa12.03□□□□□ -0.48
SEMA3B-213ENST00000618865 FAM236CP0DP71 79 aa12.03□□□□□ -0.48
SEMA3B-213ENST00000618865 LITAFQ99732 161 aa12.03□□□□□ -0.48
SEMA3B-213ENST00000618865 KMT2BQ9UMN6 2715 aaPredicted RBP12.03□□□□□ -0.48
SEMA3B-213ENST00000618865 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.48
SEMA3B-213ENST00000618865 PLA2G2AP14555 144 aa12.02□□□□□ -0.48
SEMA3B-213ENST00000618865 TEN1Q86WV5 123 aa12.02□□□□□ -0.48
SEMA3B-213ENST00000618865 PPDPFLQ8WWR9 84 aa12.02□□□□□ -0.48
SEMA3B-213ENST00000618865 SMR3AQ99954 134 aa12.02□□□□□ -0.48
SEMA3B-213ENST00000618865 C16orf95Q9H693 158 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms