RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 IGLV4-3A0A075B6K6 122 aa13.23□□□□□ -0.29
ATXN2-227ENST00000616825 PRB2P02812 416 aaPredicted RBP13.23□□□□□ -0.29
ATXN2-227ENST00000616825 C10orf99Q6UWK7 81 aa13.23□□□□□ -0.29
ATXN2-227ENST00000616825 LINC00482Q8N8I6 264 aa13.23□□□□□ -0.29
ATXN2-227ENST00000616825 TRBV6-4A0A1B0GX49 114 aa13.23□□□□□ -0.29
ATXN2-227ENST00000616825 ZNF22P17026 224 aaPredicted RBP13.23□□□□□ -0.29
ATXN2-227ENST00000616825 NEXN-AS1Q8NBZ9 246 aa13.23□□□□□ -0.29
ATXN2-227ENST00000616825 M0QY20 66 aa13.22□□□□□ -0.29
ATXN2-227ENST00000616825 TRBV6-8A0A0A6YYG3 113 aa13.22□□□□□ -0.29
ATXN2-227ENST00000616825 LINC00643Q86TS7 51 aa13.22□□□□□ -0.29
ATXN2-227ENST00000616825 ZNF843Q8N446 348 aa13.22□□□□□ -0.29
ATXN2-227ENST00000616825 Q8N976 141 aa13.22□□□□□ -0.29
ATXN2-227ENST00000616825 IBA57-AS1B1ANH7 110 aa13.22□□□□□ -0.29
ATXN2-227ENST00000616825 BPY2O14599 106 aa13.22□□□□□ -0.29
ATXN2-227ENST00000616825 PSMG3-AS1Q96PY0 264 aa13.21□□□□□ -0.29
ATXN2-227ENST00000616825 ZNF106Q9H2Y7 1883 aaKnown RBP13.21□□□□□ -0.29
ATXN2-227ENST00000616825 CFAP126Q5VTH2 177 aa13.21□□□□□ -0.3
ATXN2-227ENST00000616825 CRIP1P50238 77 aa13.2□□□□□ -0.3
ATXN2-227ENST00000616825 A0A096LNI7 61 aa13.2□□□□□ -0.3
ATXN2-227ENST00000616825 LINC01006Q8NI28 216 aa13.19□□□□□ -0.3
ATXN2-227ENST00000616825 KIAA1549Q9HCM3 1950 aa13.19□□□□□ -0.3
ATXN2-227ENST00000616825 TCL1BO95988 128 aa13.19□□□□□ -0.3
ATXN2-227ENST00000616825 A0A087WZ39 114 aa13.18□□□□□ -0.3
ATXN2-227ENST00000616825 FAM110AQ9BQ89 295 aa13.18□□□□□ -0.3
ATXN2-227ENST00000616825 XAGE1AQ9HD64 81 aa13.18□□□□□ -0.3
ATXN2-227ENST00000616825 TMEM131Q92545 1883 aa13.18□□□□□ -0.3
ATXN2-227ENST00000616825 TRBV27A0A0K0K1C4 114 aa13.18□□□□□ -0.3
ATXN2-227ENST00000616825 SYCNQ0VAF6 134 aa13.17□□□□□ -0.3
ATXN2-227ENST00000616825 SS18L2Q9UHA2 77 aa13.17□□□□□ -0.3
ATXN2-227ENST00000616825 Q8N6K4 173 aa13.16□□□□□ -0.3
ATXN2-227ENST00000616825 LINC00308Q8TCZ7 52 aa13.16□□□□□ -0.3
ATXN2-227ENST00000616825 TRBV6-5A0A0K0K1A5 114 aa13.15□□□□□ -0.3
ATXN2-227ENST00000616825 FAM19A1Q7Z5A9 133 aa13.15□□□□□ -0.3
ATXN2-227ENST00000616825 KIR2DL5BQ8NHK3 375 aa13.15□□□□□ -0.3
ATXN2-227ENST00000616825 TMEM223A0PJW6 202 aa13.15□□□□□ -0.3
ATXN2-227ENST00000616825 ZNF702PQ9H963 129 aa13.15□□□□□ -0.31
ATXN2-227ENST00000616825 HCFC1P51610 2035 aa13.14□□□□□ -0.31
ATXN2-227ENST00000616825 LY6G6DO95868 133 aa13.14□□□□□ -0.31
ATXN2-227ENST00000616825 PYGO1Q9Y3Y4 419 aa13.14□□□□□ -0.31
ATXN2-227ENST00000616825 BBC3Q96PG8 261 aaPredicted RBP13.14□□□□□ -0.31
ATXN2-227ENST00000616825 TRAV10A0A0B4J240 114 aa13.13□□□□□ -0.31
ATXN2-227ENST00000616825 PIK3CD-AS1Q5SR53 167 aa13.13□□□□□ -0.31
ATXN2-227ENST00000616825 PROK1P58294 105 aa13.13□□□□□ -0.31
ATXN2-227ENST00000616825 COL4A4P53420 1690 aaPredicted RBP13.13□□□□□ -0.31
ATXN2-227ENST00000616825 TNRC6BQ9UPQ9 1833 aaKnown RBP13.13□□□□□ -0.31
ATXN2-227ENST00000616825 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
ATXN2-227ENST00000616825 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.11□□□□□ -0.31
ATXN2-227ENST00000616825 G3V4G9 280 aa13.11□□□□□ -0.31
ATXN2-227ENST00000616825 IGKV4-1P06312 121 aa13.11□□□□□ -0.31
ATXN2-227ENST00000616825 LRCOL1A6NCL2 159 aa13.11□□□□□ -0.31
ATXN2-227ENST00000616825 C6orf99Q4VX62 202 aa13.11□□□□□ -0.31
ATXN2-227ENST00000616825 SPANXB1Q9NS25 103 aaPredicted RBP13.11□□□□□ -0.31
ATXN2-227ENST00000616825 MUC4Q99102 2169 aa13.11□□□□□ -0.31
ATXN2-227ENST00000616825 BPTFQ12830 3046 aa13.1□□□□□ -0.31
ATXN2-227ENST00000616825 RNASE3P12724 160 aaKnown RBP13.1□□□□□ -0.31
ATXN2-227ENST00000616825 TRAV23DV6A0A075B6W5 121 aa13.1□□□□□ -0.31
ATXN2-227ENST00000616825 IGLV2-11P01706 119 aa13.1□□□□□ -0.31
ATXN2-227ENST00000616825 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
ATXN2-227ENST00000616825 KLLNB2CW77 178 aa13.1□□□□□ -0.31
ATXN2-227ENST00000616825 LTBP2Q14767 1821 aa13.09□□□□□ -0.31
ATXN2-227ENST00000616825 CD164L2Q6UWJ8 174 aa13.09□□□□□ -0.31
ATXN2-227ENST00000616825 MAPKAPK5-AS1Q8N8E1 139 aa13.08□□□□□ -0.31
ATXN2-227ENST00000616825 UPK3BQ9BT76 320 aa13.08□□□□□ -0.31
ATXN2-227ENST00000616825 U3KQK5 164 aa13.08□□□□□ -0.31
ATXN2-227ENST00000616825 KPRPQ5T749 579 aaPredicted RBP13.08□□□□□ -0.32
ATXN2-227ENST00000616825 J3KT08 172 aa13.08□□□□□ -0.32
ATXN2-227ENST00000616825 IGLV1-40P01703 118 aa13.08□□□□□ -0.32
ATXN2-227ENST00000616825 TEX49A0A1B0GTD5 131 aa13.07□□□□□ -0.32
ATXN2-227ENST00000616825 FAM19A5Q7Z5A7 132 aaPredicted RBP13.07□□□□□ -0.32
ATXN2-227ENST00000616825 SLPIP03973 132 aa13.06□□□□□ -0.32
ATXN2-227ENST00000616825 Q6ZS46 218 aa13.06□□□□□ -0.32
ATXN2-227ENST00000616825 WFDC10AQ9H1F0 79 aa13.06□□□□□ -0.32
ATXN2-227ENST00000616825 C11orf21Q9P2W6 132 aa13.06□□□□□ -0.32
ATXN2-227ENST00000616825 POLR2KP53803 58 aaKnown RBP13.06□□□□□ -0.32
ATXN2-227ENST00000616825 SEC61GP60059 68 aa13.05□□□□□ -0.32
ATXN2-227ENST00000616825 TRIAP1O43715 76 aa13.05□□□□□ -0.32
ATXN2-227ENST00000616825 CENPFP49454 3210 aa13.05□□□□□ -0.32
ATXN2-227ENST00000616825 LELP1Q5T871 98 aa13.05□□□□□ -0.32
ATXN2-227ENST00000616825 TRBV30A0A0K0K1B3 111 aa13.05□□□□□ -0.32
ATXN2-227ENST00000616825 TSHBP01222 138 aa13.04□□□□□ -0.32
ATXN2-227ENST00000616825 C20orf197Q8N268 126 aa13.04□□□□□ -0.32
ATXN2-227ENST00000616825 NRACQ8N912 160 aa13.04□□□□□ -0.32
ATXN2-227ENST00000616825 PRR9Q5T870 116 aa13.04□□□□□ -0.32
ATXN2-227ENST00000616825 NDUFC2O95298 119 aa13.03□□□□□ -0.32
ATXN2-227ENST00000616825 DCANP1Q8TF63 244 aa13.03□□□□□ -0.32
ATXN2-227ENST00000616825 CEP350Q5VT06 3117 aa13.03□□□□□ -0.32
ATXN2-227ENST00000616825 TIMM17BO60830 172 aa13.03□□□□□ -0.32
ATXN2-227ENST00000616825 CCKP06307 115 aa13.03□□□□□ -0.32
ATXN2-227ENST00000616825 C7orf33Q8WU49 177 aa13.03□□□□□ -0.32
ATXN2-227ENST00000616825 ATP5EP2Q5VTU8 51 aa13.02□□□□□ -0.32
ATXN2-227ENST00000616825 ACANP16112 2415 aa13.02□□□□□ -0.33
ATXN2-227ENST00000616825 C18orf65Q6ZTR6 163 aa13.02□□□□□ -0.33
ATXN2-227ENST00000616825 C1orf158Q8N1D5 194 aa13.02□□□□□ -0.33
ATXN2-227ENST00000616825 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.33
ATXN2-227ENST00000616825 USP17L23D6RBM5 183 aa13.02□□□□□ -0.33
ATXN2-227ENST00000616825 C9orf85Q96MD7 179 aa13.02□□□□□ -0.33
ATXN2-227ENST00000616825 TP73-AS1Q9UF72 201 aa13.02□□□□□ -0.33
ATXN2-227ENST00000616825 IGLV2-18A0A075B6J9 118 aa13.01□□□□□ -0.33
ATXN2-227ENST00000616825 MRGPRG-AS1Q2M3A8 158 aa13.01□□□□□ -0.33
ATXN2-227ENST00000616825 LINC00526Q96FQ7 95 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms