RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SERTAD4-AS1Q5TG53 156 aa12.02□□□□□ -0.49
TRAPPC3-209ENST00000616395 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.49
TRAPPC3-209ENST00000616395 PRADC1Q9BSG0 188 aa12.02□□□□□ -0.49
TRAPPC3-209ENST00000616395 CYSLTR1Q9Y271 337 aa12.02□□□□□ -0.49
TRAPPC3-209ENST00000616395 K7EQD1 137 aa12.01□□□□□ -0.49
TRAPPC3-209ENST00000616395 SMAGPQ0VAQ4 97 aa12.01□□□□□ -0.49
TRAPPC3-209ENST00000616395 IFI27L1Q96BM0 104 aa12.01□□□□□ -0.49
TRAPPC3-209ENST00000616395 TRBV6-4A0A1B0GX49 114 aa12□□□□□ -0.49
TRAPPC3-209ENST00000616395 SYS1-DBNDD2H3BUS1 97 aa12□□□□□ -0.49
TRAPPC3-209ENST00000616395 MRPS16Q9Y3D3 137 aaKnown RBP12□□□□□ -0.49
TRAPPC3-209ENST00000616395 KRTAP29-1A8MX34 341 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC3-209ENST00000616395 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC3-209ENST00000616395 Q6ZN92 141 aa11.99□□□□□ -0.49
TRAPPC3-209ENST00000616395 LINC00612Q8N6U2 182 aa11.99□□□□□ -0.49
TRAPPC3-209ENST00000616395 ZNF479Q96JC4 524 aa11.99□□□□□ -0.49
TRAPPC3-209ENST00000616395 TRAV26-1A0A087WT03 109 aa11.98□□□□□ -0.49
TRAPPC3-209ENST00000616395 HSBP1L1C9JCN9 74 aa11.98□□□□□ -0.49
TRAPPC3-209ENST00000616395 COTL1Q14019 142 aa11.98□□□□□ -0.49
TRAPPC3-209ENST00000616395 TRBV7-3A0A075B6L6 115 aa11.97□□□□□ -0.49
TRAPPC3-209ENST00000616395 PRSS1P07477 247 aa11.97□□□□□ -0.49
TRAPPC3-209ENST00000616395 DNAH10OSP0CZ25 163 aa11.97□□□□□ -0.49
TRAPPC3-209ENST00000616395 C2orf66Q6UXQ4 117 aa11.97□□□□□ -0.49
TRAPPC3-209ENST00000616395 DAZ4Q86SG3 579 aaKnown RBP11.97□□□□□ -0.49
TRAPPC3-209ENST00000616395 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
TRAPPC3-209ENST00000616395 SCGB3A1Q96QR1 104 aa11.97□□□□□ -0.49
TRAPPC3-209ENST00000616395 VAMP8Q9BV40 100 aa11.97□□□□□ -0.49
TRAPPC3-209ENST00000616395 DAZ3Q9NR90 486 aaKnown RBP11.97□□□□□ -0.49
TRAPPC3-209ENST00000616395 A0A0J9YY99 117 aa11.96□□□□□ -0.49
TRAPPC3-209ENST00000616395 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
TRAPPC3-209ENST00000616395 PAPPA-AS1Q5QFB9 102 aa11.96□□□□□ -0.49
TRAPPC3-209ENST00000616395 NEXN-AS1Q8NBZ9 246 aa11.96□□□□□ -0.49
TRAPPC3-209ENST00000616395 TMEM141Q96I45 108 aa11.96□□□□□ -0.49
TRAPPC3-209ENST00000616395 TSTD3H0UI37 97 aa11.95□□□□□ -0.5
TRAPPC3-209ENST00000616395 H0Y8G0 127 aa11.95□□□□□ -0.5
TRAPPC3-209ENST00000616395 GCSHP23434 173 aa11.95□□□□□ -0.5
TRAPPC3-209ENST00000616395 ERASQ7Z444 233 aa11.95□□□□□ -0.5
TRAPPC3-209ENST00000616395 A0A087WTM6 91 aa11.94□□□□□ -0.5
TRAPPC3-209ENST00000616395 A0A096LNJ9 63 aa11.94□□□□□ -0.5
TRAPPC3-209ENST00000616395 TEX43Q6ZNM6 134 aa11.92□□□□□ -0.5
TRAPPC3-209ENST00000616395 NEGR1Q7Z3B1 354 aa11.92□□□□□ -0.5
TRAPPC3-209ENST00000616395 SLC25A29Q8N8R3 303 aa11.92□□□□□ -0.5
TRAPPC3-209ENST00000616395 PRO0255Q9UI72 69 aa11.92□□□□□ -0.5
TRAPPC3-209ENST00000616395 PLA2G2DQ9UNK4 145 aa11.92□□□□□ -0.5
TRAPPC3-209ENST00000616395 HHLA3Q9XRX5 114 aa11.92□□□□□ -0.5
TRAPPC3-209ENST00000616395 TSHBP01222 138 aa11.91□□□□□ -0.5
TRAPPC3-209ENST00000616395 NPSP0C0P6 89 aa11.91□□□□□ -0.5
TRAPPC3-209ENST00000616395 LINC01545Q5VT33 79 aa11.91□□□□□ -0.5
TRAPPC3-209ENST00000616395 TIMM17AQ99595 171 aa11.91□□□□□ -0.5
TRAPPC3-209ENST00000616395 PKIAP61925 76 aa11.9□□□□□ -0.5
TRAPPC3-209ENST00000616395 FHL2Q14192 279 aa11.9□□□□□ -0.5
TRAPPC3-209ENST00000616395 LINC00173Q6ZV60 143 aa11.9□□□□□ -0.5
TRAPPC3-209ENST00000616395 C20orf203Q8NBC4 194 aa11.9□□□□□ -0.5
TRAPPC3-209ENST00000616395 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
TRAPPC3-209ENST00000616395 GAGE12JA6NER3 117 aa11.89□□□□□ -0.51
TRAPPC3-209ENST00000616395 GAGE1Q13065 139 aa11.89□□□□□ -0.51
TRAPPC3-209ENST00000616395 GAGE4Q13068 117 aa11.89□□□□□ -0.51
TRAPPC3-209ENST00000616395 GAGE5Q13069 117 aa11.89□□□□□ -0.51
TRAPPC3-209ENST00000616395 GAGE13Q4V321 117 aa11.89□□□□□ -0.51
TRAPPC3-209ENST00000616395 TRAV9-2A0A087WT02 112 aa11.88□□□□□ -0.51
TRAPPC3-209ENST00000616395 H3BNG1 76 aa11.88□□□□□ -0.51
TRAPPC3-209ENST00000616395 SIVA1O15304 175 aa11.88□□□□□ -0.51
TRAPPC3-209ENST00000616395 UBE2D3P61077 147 aa11.88□□□□□ -0.51
TRAPPC3-209ENST00000616395 UBE2D2P62837 147 aa11.88□□□□□ -0.51
TRAPPC3-209ENST00000616395 SH2D6Q7Z4S9 175 aa11.88□□□□□ -0.51
TRAPPC3-209ENST00000616395 PAX4O43316 350 aa11.87□□□□□ -0.51
TRAPPC3-209ENST00000616395 PLNP26678 52 aa11.87□□□□□ -0.51
TRAPPC3-209ENST00000616395 DGAT2L7PQ6IED9 249 aa11.87□□□□□ -0.51
TRAPPC3-209ENST00000616395 GTSF1LQ9H1H1 148 aa11.87□□□□□ -0.51
TRAPPC3-209ENST00000616395 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
TRAPPC3-209ENST00000616395 UBE2L6O14933 153 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 DPM2O94777 84 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 CRYBA4P53673 196 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 NFE4Q86UQ8 179 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 Q8N976 141 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 VSIG2Q96IQ7 327 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 PYGO1Q9Y3Y4 419 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 A0A087WX48 190 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 A0A096LPF7 62 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 H7C423 109 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 PMVKQ15126 192 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 SPATA45Q537H7 98 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 PAM16Q9Y3D7 125 aa11.86□□□□□ -0.51
TRAPPC3-209ENST00000616395 TRBV25-1A0A075B6N4 114 aa11.85□□□□□ -0.51
TRAPPC3-209ENST00000616395 PLA2G1BP04054 148 aaKnown RBP11.85□□□□□ -0.51
TRAPPC3-209ENST00000616395 DEFB104AQ8WTQ1 72 aa11.85□□□□□ -0.51
TRAPPC3-209ENST00000616395 CHTOPQ9Y3Y2 248 aaKnown RBP11.85□□□□□ -0.51
TRAPPC3-209ENST00000616395 IGHV3-38A0A0C4DH36 116 aa11.84□□□□□ -0.51
TRAPPC3-209ENST00000616395 PCP4L1A6NKN8 68 aa11.84□□□□□ -0.51
TRAPPC3-209ENST00000616395 IGKCP01834 107 aa11.84□□□□□ -0.51
TRAPPC3-209ENST00000616395 GYPEP15421 78 aa11.84□□□□□ -0.51
TRAPPC3-209ENST00000616395 ATP6V0E2Q8NHE4 81 aa11.84□□□□□ -0.51
TRAPPC3-209ENST00000616395 TMEM101Q96IK0 257 aa11.84□□□□□ -0.51
TRAPPC3-209ENST00000616395 TMEM243Q9BU79 118 aa11.84□□□□□ -0.51
TRAPPC3-209ENST00000616395 TIMM21Q9BVV7 248 aa11.84□□□□□ -0.51
TRAPPC3-209ENST00000616395 VCX2Q9H322 139 aa11.84□□□□□ -0.51
TRAPPC3-209ENST00000616395 LRP1Q07954 4544 aaKnown RBP11.83□□□□□ -0.52
TRAPPC3-209ENST00000616395 RNF213Q63HN8 5207 aa11.83□□□□□ -0.52
TRAPPC3-209ENST00000616395 IGIPA6NJ69 53 aa11.83□□□□□ -0.52
TRAPPC3-209ENST00000616395 F8VRH5 84 aa11.83□□□□□ -0.52
TRAPPC3-209ENST00000616395 ODF1Q14990 250 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms