RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 UBE2D1P51668 147 aa14□□□□□ -0.17
SPAST-203ENST00000615843 C6orf99Q4VX62 202 aa14□□□□□ -0.17
SPAST-203ENST00000615843 MRPL55Q7Z7F7 128 aaKnown RBP13.99□□□□□ -0.17
SPAST-203ENST00000615843 FSTL3O95633 263 aa13.99□□□□□ -0.17
SPAST-203ENST00000615843 CHCHD10Q8WYQ3 142 aaPredicted RBP13.99□□□□□ -0.17
SPAST-203ENST00000615843 DEFB113Q30KQ7 82 aa13.99□□□□□ -0.17
SPAST-203ENST00000615843 TNFRSF13BO14836 293 aaPredicted RBP13.97□□□□□ -0.17
SPAST-203ENST00000615843 ZFHX2Q9C0A1 2572 aaPredicted RBP13.97□□□□□ -0.17
SPAST-203ENST00000615843 H0Y9J4 135 aa13.97□□□□□ -0.17
SPAST-203ENST00000615843 IGIPA6NJ69 53 aa13.97□□□□□ -0.17
SPAST-203ENST00000615843 CCL18P55774 89 aa13.97□□□□□ -0.17
SPAST-203ENST00000615843 NRGNQ92686 78 aa13.97□□□□□ -0.17
SPAST-203ENST00000615843 UBE2AP49459 152 aa13.97□□□□□ -0.17
SPAST-203ENST00000615843 UBE2D3P61077 147 aa13.97□□□□□ -0.17
SPAST-203ENST00000615843 UBE2D2P62837 147 aa13.97□□□□□ -0.17
SPAST-203ENST00000615843 Q6JHZ5 121 aa13.96□□□□□ -0.17
SPAST-203ENST00000615843 C2CD3Q4AC94 2353 aa13.96□□□□□ -0.17
SPAST-203ENST00000615843 UBE2D4Q9Y2X8 147 aa13.96□□□□□ -0.17
SPAST-203ENST00000615843 CRIP2P52943 208 aaPredicted RBP13.96□□□□□ -0.18
SPAST-203ENST00000615843 POM121L12Q8N7R1 296 aa13.95□□□□□ -0.18
SPAST-203ENST00000615843 Q8NA96 180 aa13.95□□□□□ -0.18
SPAST-203ENST00000615843 SMIM11BQ8TCY0 68 aa13.95□□□□□ -0.18
SPAST-203ENST00000615843 CRYGDP07320 174 aa13.94□□□□□ -0.18
SPAST-203ENST00000615843 ATG2AQ2TAZ0 1938 aa13.94□□□□□ -0.18
SPAST-203ENST00000615843 A0A096LNJ9 63 aa13.94□□□□□ -0.18
SPAST-203ENST00000615843 KLLNB2CW77 178 aa13.94□□□□□ -0.18
SPAST-203ENST00000615843 ATRXP46100 2492 aa13.94□□□□□ -0.18
SPAST-203ENST00000615843 TRBV6-8A0A0A6YYG3 113 aa13.94□□□□□ -0.18
SPAST-203ENST00000615843 MRPS36P82909 103 aaKnown RBP13.93□□□□□ -0.18
SPAST-203ENST00000615843 CCKP06307 115 aa13.92□□□□□ -0.18
SPAST-203ENST00000615843 C9orf85Q96MD7 179 aa13.92□□□□□ -0.18
SPAST-203ENST00000615843 DEFB114Q30KQ6 69 aa13.91□□□□□ -0.18
SPAST-203ENST00000615843 LINC00526Q96FQ7 95 aa13.91□□□□□ -0.18
SPAST-203ENST00000615843 HRCT1Q6UXD1 115 aa13.91□□□□□ -0.18
SPAST-203ENST00000615843 FAM19A3Q7Z5A8 133 aa13.91□□□□□ -0.18
SPAST-203ENST00000615843 SMIM9A6NGZ8 99 aa13.91□□□□□ -0.18
SPAST-203ENST00000615843 Q8N6K4 173 aa13.91□□□□□ -0.18
SPAST-203ENST00000615843 IGLV4-69A0A075B6H9 119 aa13.9□□□□□ -0.18
SPAST-203ENST00000615843 F8W735 103 aaPredicted RBP13.9□□□□□ -0.18
SPAST-203ENST00000615843 Q6ZQY7 126 aa13.9□□□□□ -0.18
SPAST-203ENST00000615843 XAGE1AQ9HD64 81 aa13.9□□□□□ -0.18
SPAST-203ENST00000615843 TRBV6-4A0A1B0GX49 114 aa13.89□□□□□ -0.19
SPAST-203ENST00000615843 NAV3Q8IVL0 2385 aa13.89□□□□□ -0.19
SPAST-203ENST00000615843 ACACBO00763 2458 aa13.89□□□□□ -0.19
SPAST-203ENST00000615843 BDP1A6H8Y1 2624 aa13.88□□□□□ -0.19
SPAST-203ENST00000615843 TSPEAR-AS2P59090 65 aa13.88□□□□□ -0.19
SPAST-203ENST00000615843 DCANP1Q8TF63 244 aa13.88□□□□□ -0.19
SPAST-203ENST00000615843 ARHGAP32A7KAX9 2087 aa13.87□□□□□ -0.19
SPAST-203ENST00000615843 SMIM26A0A096LP01 95 aa13.87□□□□□ -0.19
SPAST-203ENST00000615843 IGKV4-1P06312 121 aa13.87□□□□□ -0.19
SPAST-203ENST00000615843 CSPG4Q6UVK1 2322 aa13.87□□□□□ -0.19
SPAST-203ENST00000615843 C3orf84H3BNL1 204 aa13.86□□□□□ -0.19
SPAST-203ENST00000615843 PSMG3-AS1Q96PY0 264 aa13.86□□□□□ -0.19
SPAST-203ENST00000615843 C1orf158Q8N1D5 194 aa13.85□□□□□ -0.19
SPAST-203ENST00000615843 C1orf195Q5TG92 126 aa13.85□□□□□ -0.19
SPAST-203ENST00000615843 HIGD2AQ9BW72 106 aa13.85□□□□□ -0.19
SPAST-203ENST00000615843 LTBP2Q14767 1821 aa13.85□□□□□ -0.19
SPAST-203ENST00000615843 SORL1Q92673 2214 aa13.85□□□□□ -0.19
SPAST-203ENST00000615843 TTC28Q96AY4 2481 aa13.84□□□□□ -0.19
SPAST-203ENST00000615843 Q6ZSV7 163 aa13.84□□□□□ -0.19
SPAST-203ENST00000615843 A0A087WVE0 104 aa13.83□□□□□ -0.19
SPAST-203ENST00000615843 C10orf99Q6UWK7 81 aa13.83□□□□□ -0.2
SPAST-203ENST00000615843 LYRM9A8MSI8 78 aa13.82□□□□□ -0.2
SPAST-203ENST00000615843 EML5Q05BV3 1969 aa13.82□□□□□ -0.2
SPAST-203ENST00000615843 WFDC10BQ8IUB3 73 aa13.81□□□□□ -0.2
SPAST-203ENST00000615843 CDIP1Q9H305 208 aa13.81□□□□□ -0.2
SPAST-203ENST00000615843 SERP1Q9Y6X1 66 aa13.81□□□□□ -0.2
SPAST-203ENST00000615843 FAM19A5Q7Z5A7 132 aaPredicted RBP13.8□□□□□ -0.2
SPAST-203ENST00000615843 TRAV7A0A075B6U4 112 aa13.8□□□□□ -0.2
SPAST-203ENST00000615843 COX8CQ7Z4L0 72 aa13.8□□□□□ -0.2
SPAST-203ENST00000615843 DNAJC9-AS1A6NH13 148 aa13.8□□□□□ -0.2
SPAST-203ENST00000615843 MIFP14174 115 aa13.8□□□□□ -0.2
SPAST-203ENST00000615843 IGLV2-18A0A075B6J9 118 aa13.79□□□□□ -0.2
SPAST-203ENST00000615843 CD164L2Q6UWJ8 174 aa13.79□□□□□ -0.2
SPAST-203ENST00000615843 Q6YL49 198 aa13.79□□□□□ -0.2
SPAST-203ENST00000615843 B9D2Q9BPU9 175 aa13.79□□□□□ -0.2
SPAST-203ENST00000615843 LINC00959A0A1B0GUT2 108 aa13.79□□□□□ -0.2
SPAST-203ENST00000615843 LINC00242Q5T6M2 205 aa13.79□□□□□ -0.2
SPAST-203ENST00000615843 IGKV2-24A0A0C4DH68 120 aa13.79□□□□□ -0.2
SPAST-203ENST00000615843 PRM2P04554 102 aa13.78□□□□□ -0.2
SPAST-203ENST00000615843 PRR4Q16378 134 aa13.78□□□□□ -0.2
SPAST-203ENST00000615843 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
SPAST-203ENST00000615843 ADAMTSL4-AS1Q5T5F5 129 aa13.78□□□□□ -0.2
SPAST-203ENST00000615843 RPL28P46779 137 aaKnown RBP13.77□□□□□ -0.2
SPAST-203ENST00000615843 C11orf71Q6IPW1 123 aa13.77□□□□□ -0.21
SPAST-203ENST00000615843 LOC100131303A0A0U1RQF7 123 aa13.77□□□□□ -0.21
SPAST-203ENST00000615843 NTM-AS1Q6ZSK4 140 aa13.77□□□□□ -0.21
SPAST-203ENST00000615843 KLK5Q9Y337 293 aaPredicted RBP13.77□□□□□ -0.21
SPAST-203ENST00000615843 SEC61GP60059 68 aa13.76□□□□□ -0.21
SPAST-203ENST00000615843 MUC22E2RYF6 1773 aaPredicted RBP13.76□□□□□ -0.21
SPAST-203ENST00000615843 A0A096LNI7 61 aa13.76□□□□□ -0.21
SPAST-203ENST00000615843 J3QKU1 62 aa13.76□□□□□ -0.21
SPAST-203ENST00000615843 PTPN13Q12923 2485 aa13.76□□□□□ -0.21
SPAST-203ENST00000615843 SMIM1B2RUZ4 78 aa13.75□□□□□ -0.21
SPAST-203ENST00000615843 FAM19A1Q7Z5A9 133 aa13.75□□□□□ -0.21
SPAST-203ENST00000615843 TECTAO75443 2155 aa13.75□□□□□ -0.21
SPAST-203ENST00000615843 ZNF580Q9UK33 172 aa13.74□□□□□ -0.21
SPAST-203ENST00000615843 A6NED7 52 aa13.73□□□□□ -0.21
SPAST-203ENST00000615843 BBC3Q96PG8 261 aaPredicted RBP13.73□□□□□ -0.21
SPAST-203ENST00000615843 COX17Q14061 63 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms