RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 RETNQ9HD89 108 aa6.26□□□□□ -1.41
CCDC47-207ENST00000612558 SPANXA1Q9NS26 97 aa6.26□□□□□ -1.41
CCDC47-207ENST00000612558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.25□□□□□ -1.41
CCDC47-207ENST00000612558 IGKV2-29A2NJV5 120 aaPredicted RBP6.25□□□□□ -1.41
CCDC47-207ENST00000612558 K7EIL1 84 aa6.25□□□□□ -1.41
CCDC47-207ENST00000612558 PRB2P02812 416 aaPredicted RBP6.25□□□□□ -1.41
CCDC47-207ENST00000612558 IGLC3P0DOY3 106 aa6.25□□□□□ -1.41
CCDC47-207ENST00000612558 GYPEP15421 78 aa6.25□□□□□ -1.41
CCDC47-207ENST00000612558 TMEM97Q5BJF2 176 aa6.25□□□□□ -1.41
CCDC47-207ENST00000612558 NTM-AS1Q6ZSK4 140 aa6.25□□□□□ -1.41
CCDC47-207ENST00000612558 SBSPONQ8IVN8 264 aa6.25□□□□□ -1.41
CCDC47-207ENST00000612558 VCX2Q9H322 139 aa6.25□□□□□ -1.41
CCDC47-207ENST00000612558 C11orf68Q9H3H3 251 aaKnown RBP6.25□□□□□ -1.41
CCDC47-207ENST00000612558 CST9LQ9H4G1 147 aa6.25□□□□□ -1.41
CCDC47-207ENST00000612558 UBE2D4Q9Y2X8 147 aa6.25□□□□□ -1.41
CCDC47-207ENST00000612558 IGLV4-3A0A075B6K6 122 aa6.24□□□□□ -1.41
CCDC47-207ENST00000612558 LINC00587B1AMM8 73 aa6.24□□□□□ -1.41
CCDC47-207ENST00000612558 SMAGPQ0VAQ4 97 aa6.24□□□□□ -1.41
CCDC47-207ENST00000612558 DEFB121Q5J5C9 76 aa6.24□□□□□ -1.41
CCDC47-207ENST00000612558 LURAP1LQ8IV03 231 aa6.24□□□□□ -1.41
CCDC47-207ENST00000612558 STPG4Q8N801 248 aa6.24□□□□□ -1.41
CCDC47-207ENST00000612558 OPRPNQ99935 248 aaPredicted RBP6.24□□□□□ -1.41
CCDC47-207ENST00000612558 TIMM21Q9BVV7 248 aa6.24□□□□□ -1.41
CCDC47-207ENST00000612558 UQCR10Q9UDW1 63 aa6.24□□□□□ -1.41
CCDC47-207ENST00000612558 TRBV25-1A0A075B6N4 114 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 F5H768 121 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 H7C423 109 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 ZC2HC1BQ5TFG8 222 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 CEMP1Q6PRD7 247 aaPredicted RBP6.23□□□□□ -1.41
CCDC47-207ENST00000612558 ATP6V0E2Q8NHE4 81 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 C14orf144Q96I85 54 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 SPATA25Q9BR10 227 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 TRBV6-8A0A0A6YYG3 113 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 MRPS36P82909 103 aaKnown RBP6.23□□□□□ -1.41
CCDC47-207ENST00000612558 C12orf74Q32Q52 190 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 ANKRD39Q53RE8 183 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 DGAT2L7PQ6IED9 249 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 MRPL52Q86TS9 123 aaKnown RBP6.23□□□□□ -1.41
CCDC47-207ENST00000612558 FAM104AQ969W3 186 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 VSIG2Q96IQ7 327 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 AMELXQ99217 191 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 TMEM243Q9BU79 118 aa6.23□□□□□ -1.41
CCDC47-207ENST00000612558 CSDC2Q9Y534 153 aaKnown RBP6.23□□□□□ -1.41
CCDC47-207ENST00000612558 IGLV4-69A0A075B6H9 119 aa6.22□□□□□ -1.41
CCDC47-207ENST00000612558 TRAV26-1A0A087WT03 109 aa6.22□□□□□ -1.41
CCDC47-207ENST00000612558 A0A0J9YY99 117 aa6.22□□□□□ -1.41
CCDC47-207ENST00000612558 UBE2L6O14933 153 aa6.22□□□□□ -1.41
CCDC47-207ENST00000612558 COX8AP10176 69 aa6.22□□□□□ -1.41
CCDC47-207ENST00000612558 FGF6P10767 208 aa6.22□□□□□ -1.41
CCDC47-207ENST00000612558 TM2D3Q9BRN9 247 aa6.22□□□□□ -1.41
CCDC47-207ENST00000612558 A0A0J9YWU9 116 aa6.21□□□□□ -1.42
CCDC47-207ENST00000612558 HTN3P15516 51 aa6.21□□□□□ -1.42
CCDC47-207ENST00000612558 DEFA6Q01524 100 aa6.21□□□□□ -1.42
CCDC47-207ENST00000612558 SLC25A34Q6PIV7 304 aa6.21□□□□□ -1.42
CCDC47-207ENST00000612558 MRAPQ8TCY5 172 aa6.21□□□□□ -1.42
CCDC47-207ENST00000612558 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
CCDC47-207ENST00000612558 MRPL23Q16540 153 aaKnown RBP6.2□□□□□ -1.42
CCDC47-207ENST00000612558 AMMECR1LQ6DCA0 310 aa6.2□□□□□ -1.42
CCDC47-207ENST00000612558 Q6ZUT4 128 aa6.2□□□□□ -1.42
CCDC47-207ENST00000612558 SH2D6Q7Z4S9 175 aa6.2□□□□□ -1.42
CCDC47-207ENST00000612558 NFE4Q86UQ8 179 aa6.2□□□□□ -1.42
CCDC47-207ENST00000612558 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
CCDC47-207ENST00000612558 TMEM101Q96IK0 257 aa6.2□□□□□ -1.42
CCDC47-207ENST00000612558 C2orf88Q9BSF0 95 aa6.2□□□□□ -1.42
CCDC47-207ENST00000612558 TENM3Q9P273 2699 aa6.2□□□□□ -1.42
CCDC47-207ENST00000612558 HUWE1Q7Z6Z7 4374 aaKnown RBP6.2□□□□□ -1.42
CCDC47-207ENST00000612558 ZNF25P17030 456 aaPredicted RBP6.19□□□□□ -1.42
CCDC47-207ENST00000612558 NMUP48645 174 aa6.19□□□□□ -1.42
CCDC47-207ENST00000612558 HNRNPA3P51991 378 aaKnown RBP6.19□□□□□ -1.42
CCDC47-207ENST00000612558 TCTAP57738 103 aa6.19□□□□□ -1.42
CCDC47-207ENST00000612558 RNASE13Q5GAN3 156 aaKnown RBP6.19□□□□□ -1.42
CCDC47-207ENST00000612558 C11orf45Q8TAV5 145 aa6.19□□□□□ -1.42
CCDC47-207ENST00000612558 CHCHD5Q9BSY4 110 aa6.19□□□□□ -1.42
CCDC47-207ENST00000612558 CDC42SE2Q9NRR3 84 aa6.19□□□□□ -1.42
CCDC47-207ENST00000612558 ICOSQ9Y6W8 199 aa6.19□□□□□ -1.42
CCDC47-207ENST00000612558 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 H3BNG1 76 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 DLEU1O43261 78 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 TMEM170BQ5T4T1 132 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 Q6ZTC4 211 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 BOD1L2Q8IYS8 172 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 CHAC1Q9BUX1 264 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 MRPS16Q9Y3D3 137 aaKnown RBP6.18□□□□□ -1.42
CCDC47-207ENST00000612558 A0A096LPF7 62 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 E9PLD3 99 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 HERVK_113P61574 105 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 GAGE6Q13070 117 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 PCP2Q8IVA1 136 aa6.18□□□□□ -1.42
CCDC47-207ENST00000612558 UBE2D1P51668 147 aa6.17□□□□□ -1.42
CCDC47-207ENST00000612558 NANOS2P60321 138 aaKnown RBP6.17□□□□□ -1.42
CCDC47-207ENST00000612558 CTAG1AP78358 180 aa6.17□□□□□ -1.42
CCDC47-207ENST00000612558 A0A1B0GUV1 79 aa6.16□□□□□ -1.42
CCDC47-207ENST00000612558 SIVA1O15304 175 aa6.16□□□□□ -1.42
CCDC47-207ENST00000612558 ZNF22P17026 224 aaPredicted RBP6.16□□□□□ -1.42
CCDC47-207ENST00000612558 TIRAPP58753 221 aa6.16□□□□□ -1.42
CCDC47-207ENST00000612558 SEC11AP67812 179 aa6.16□□□□□ -1.42
CCDC47-207ENST00000612558 KRTAP21-3Q3LHN1 58 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms