RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 Q6ZSV7 163 aa5.05□□□□□ -1.6
SYNPO2-206ENST00000610556 Q6ZTI0 123 aa5.05□□□□□ -1.6
SYNPO2-206ENST00000610556 ATP6V0E2Q8NHE4 81 aa5.05□□□□□ -1.6
SYNPO2-206ENST00000610556 CLUHP3Q96NS8 147 aa5.05□□□□□ -1.6
SYNPO2-206ENST00000610556 TRBV10-2A0A0K0K1G8 114 aa5.05□□□□□ -1.6
SYNPO2-206ENST00000610556 C3orf56Q8N813 242 aa5.05□□□□□ -1.6
SYNPO2-206ENST00000610556 TMEM86BQ8N661 226 aa5.05□□□□□ -1.6
SYNPO2-206ENST00000610556 RNF183Q96D59 192 aa5.05□□□□□ -1.6
SYNPO2-206ENST00000610556 PRORYQ9H606 182 aa5.05□□□□□ -1.6
SYNPO2-206ENST00000610556 BAALC-AS2P0C853 105 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 XCL1P47992 114 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 ODF3Q96PU9 254 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 KIF25-AS1Q9Y6Z4 181 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 A0A0B4J2C4 111 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 MIAQ16674 131 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 LINC01546A6NGU7 62 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 LINC00315P59091 139 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 RPL32P62910 135 aaKnown RBP5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 ESM1Q9NQ30 184 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 K7EQD1 137 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 NDUFA7O95182 113 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 SPATA25Q9BR10 227 aa5.04□□□□□ -1.6
SYNPO2-206ENST00000610556 DEFB113Q30KQ7 82 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 DNAJC30Q96LL9 226 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 TINCRA0A1B0GVN0 87 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 TMEM89A2RUT3 159 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 DEFB114Q30KQ6 69 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 CITED2Q99967 270 aaPredicted RBP5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 Q9HAA7 133 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 Q9UF83 564 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 CRLF1O75462 422 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 HIST1H4AP62805 103 aaKnown RBP5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 PIK3CD-AS1Q5SR53 167 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 Q6YL49 198 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 POM121L12Q8N7R1 296 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 ZNF702PQ9H963 129 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 SND1-IT1Q9HBX3 110 aa5.03□□□□□ -1.6
SYNPO2-206ENST00000610556 SMG1Q96Q15 3661 aaKnown RBP5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 S100A7L2Q5SY68 101 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 TMEM263Q8WUH6 116 aaKnown RBP5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 IGHV4-31P0DP07 118 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 UBE2D3P61077 147 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 UBE2D2P62837 147 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 ADAMTSL4-AS1Q5T5F5 129 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 Q6ZSN1 163 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 ZNF575Q86XF7 245 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 MIR7-3HGQ8N6C7 128 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 FASNP49327 2511 aaKnown RBP5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 IGLV10-54A0A075B6I4 117 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 SS18Q15532 418 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 WFDC10AQ9H1F0 79 aa5.02□□□□□ -1.61
SYNPO2-206ENST00000610556 SMCPP49901 116 aaPredicted RBP5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 DAZ2Q13117 558 aaKnown RBP5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 DAZ4Q86SG3 579 aaKnown RBP5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 C4orf3Q8WVX3 66 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 EDA2RQ9HAV5 297 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 DAZ3Q9NR90 486 aaKnown RBP5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 UBE2D4Q9Y2X8 147 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 COL12A1Q99715 3063 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 CMC4P56277 68 aaPredicted RBP5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 MUC4Q99102 2169 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 TRAV4A0A0B4J268 109 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 H3BT86 120 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 DEFB4AO15263 64 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 HIST2H2BCQ6DN03 193 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 RNF152Q8N8N0 203 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 PYGO1Q9Y3Y4 419 aa5.01□□□□□ -1.61
SYNPO2-206ENST00000610556 KRTAP10-9P60411 292 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 MRPS36P82909 103 aaKnown RBP5□□□□□ -1.61
SYNPO2-206ENST00000610556 LINC00308Q8TCZ7 52 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 TRBV30A0A0K0K1B3 111 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 ATP5G1P05496 136 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 INAFM2P0DMQ5 153 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 RBMY1FQ15415 496 aaKnown RBP5□□□□□ -1.61
SYNPO2-206ENST00000610556 PRO0461Q9UI25 63 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 LOC100131303A0A0U1RQF7 123 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 ANGP03950 147 aaKnown RBP5□□□□□ -1.61
SYNPO2-206ENST00000610556 GYPEP15421 78 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 C9orf153Q5TBE3 101 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 COX7B2Q8TF08 81 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 FAM19A4Q96LR4 140 aa5□□□□□ -1.61
SYNPO2-206ENST00000610556 FAM236AA0A1B0GUQ0 79 aa4.99□□□□□ -1.61
SYNPO2-206ENST00000610556 FAM236BA0A1B0GV22 79 aa4.99□□□□□ -1.61
SYNPO2-206ENST00000610556 F5H768 121 aa4.99□□□□□ -1.61
SYNPO2-206ENST00000610556 HERV-K104P63124 156 aa4.99□□□□□ -1.61
SYNPO2-206ENST00000610556 WFDC11Q8NEX6 87 aa4.99□□□□□ -1.61
SYNPO2-206ENST00000610556 DNAJC9-AS1A6NH13 148 aa4.99□□□□□ -1.61
SYNPO2-206ENST00000610556 LAMTOR3Q9UHA4 124 aa4.99□□□□□ -1.61
SYNPO2-206ENST00000610556 LINC00694P0DN24 101 aa4.99□□□□□ -1.61
SYNPO2-206ENST00000610556 NDUFV3P56181 108 aaKnown RBP4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 COX6A2Q02221 97 aa4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 CDIP1Q9H305 208 aa4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 IGKV3D-7A0A0C4DH55 119 aa4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 H7C423 109 aa4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 LECT2O14960 151 aa4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 CHCHD7Q9BUK0 85 aa4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 TRBV10-1A0A0K0K1A3 114 aa4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 NDUFA1O15239 70 aa4.98□□□□□ -1.61
SYNPO2-206ENST00000610556 SMIM20Q8N5G0 67 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms