RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 ZNF625Q96I27 306 aaPredicted RBP12.3□□□□□ -0.44
TNIP1-220ENST00000610535 ZNF469Q96JG9 3925 aaPredicted RBP12.29□□□□□ -0.44
TNIP1-220ENST00000610535 MYO9AB2RTY4 2548 aa12.29□□□□□ -0.44
TNIP1-220ENST00000610535 H3BT86 120 aa12.29□□□□□ -0.44
TNIP1-220ENST00000610535 EDA2RQ9HAV5 297 aa12.29□□□□□ -0.44
TNIP1-220ENST00000610535 Q6Q795 121 aa12.29□□□□□ -0.44
TNIP1-220ENST00000610535 RBMY1BA6NDE4 496 aaKnown RBP12.28□□□□□ -0.44
TNIP1-220ENST00000610535 RBMY1EA6NEQ0 496 aaKnown RBP12.28□□□□□ -0.44
TNIP1-220ENST00000610535 RBMY1DP0C7P1 496 aaKnown RBP12.28□□□□□ -0.44
TNIP1-220ENST00000610535 CITED2Q99967 270 aaPredicted RBP12.28□□□□□ -0.44
TNIP1-220ENST00000610535 SPANXA1Q9NS26 97 aa12.28□□□□□ -0.44
TNIP1-220ENST00000610535 COX6A2Q02221 97 aa12.27□□□□□ -0.44
TNIP1-220ENST00000610535 RNF152Q8N8N0 203 aa12.27□□□□□ -0.44
TNIP1-220ENST00000610535 TMEM101Q96IK0 257 aa12.27□□□□□ -0.44
TNIP1-220ENST00000610535 YAE1D1Q9NRH1 226 aa12.27□□□□□ -0.45
TNIP1-220ENST00000610535 C3orf56Q8N813 242 aa12.26□□□□□ -0.45
TNIP1-220ENST00000610535 DEFB136Q30KP8 78 aa12.26□□□□□ -0.45
TNIP1-220ENST00000610535 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
TNIP1-220ENST00000610535 NF1P21359 2839 aa12.25□□□□□ -0.45
TNIP1-220ENST00000610535 C18orf65Q6ZTR6 163 aa12.24□□□□□ -0.45
TNIP1-220ENST00000610535 UBR5O95071 2799 aaPredicted RBP12.24□□□□□ -0.45
TNIP1-220ENST00000610535 B4DSR2 109 aa12.24□□□□□ -0.45
TNIP1-220ENST00000610535 NOTCH3Q9UM47 2321 aa12.24□□□□□ -0.45
TNIP1-220ENST00000610535 SLURP1P55000 103 aa12.24□□□□□ -0.45
TNIP1-220ENST00000610535 Q9H8V8 135 aa12.24□□□□□ -0.45
TNIP1-220ENST00000610535 NDUFA1O15239 70 aa12.23□□□□□ -0.45
TNIP1-220ENST00000610535 TIMM17BO60830 172 aa12.23□□□□□ -0.45
TNIP1-220ENST00000610535 NDUFA7O95182 113 aa12.23□□□□□ -0.45
TNIP1-220ENST00000610535 DGAT2L7PQ6IED9 249 aa12.23□□□□□ -0.45
TNIP1-220ENST00000610535 C2CD3Q4AC94 2353 aa12.23□□□□□ -0.45
TNIP1-220ENST00000610535 DEFB121Q5J5C9 76 aa12.23□□□□□ -0.45
TNIP1-220ENST00000610535 LINC00308Q8TCZ7 52 aa12.23□□□□□ -0.45
TNIP1-220ENST00000610535 CHD6Q8TD26 2715 aa12.22□□□□□ -0.45
TNIP1-220ENST00000610535 ZNF415Q09FC8 603 aa12.22□□□□□ -0.45
TNIP1-220ENST00000610535 SMIM20Q8N5G0 67 aa12.22□□□□□ -0.45
TNIP1-220ENST00000610535 LINC01587Q99440 93 aa12.22□□□□□ -0.45
TNIP1-220ENST00000610535 IGHV3OR16-12A0A075B7B8 117 aa12.22□□□□□ -0.45
TNIP1-220ENST00000610535 IGHV3-53P01767 116 aa12.22□□□□□ -0.45
TNIP1-220ENST00000610535 Q8N2B8 174 aa12.22□□□□□ -0.45
TNIP1-220ENST00000610535 APCP25054 2843 aa12.22□□□□□ -0.45
TNIP1-220ENST00000610535 TMEM89A2RUT3 159 aa12.21□□□□□ -0.45
TNIP1-220ENST00000610535 KRTAP10-9P60411 292 aa12.21□□□□□ -0.46
TNIP1-220ENST00000610535 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.46
TNIP1-220ENST00000610535 MEIG1Q5JSS6 88 aa12.21□□□□□ -0.46
TNIP1-220ENST00000610535 TIRAPP58753 221 aa12.2□□□□□ -0.46
TNIP1-220ENST00000610535 HIST2H2BDQ6DRA6 164 aa12.2□□□□□ -0.46
TNIP1-220ENST00000610535 SOSTDC1Q6X4U4 206 aa12.2□□□□□ -0.46
TNIP1-220ENST00000610535 C11orf72Q8NBR9 251 aa12.2□□□□□ -0.46
TNIP1-220ENST00000610535 IGLV5-45A0A087WSX0 123 aa12.2□□□□□ -0.46
TNIP1-220ENST00000610535 FAM240AA0A1B0GVK7 77 aa12.2□□□□□ -0.46
TNIP1-220ENST00000610535 LINC00242Q5T6M2 205 aa12.2□□□□□ -0.46
TNIP1-220ENST00000610535 TENM4Q6N022 2769 aa12.2□□□□□ -0.46
TNIP1-220ENST00000610535 LINC00694P0DN24 101 aa12.19□□□□□ -0.46
TNIP1-220ENST00000610535 UBE2E2Q96LR5 201 aa12.19□□□□□ -0.46
TNIP1-220ENST00000610535 MRPL23Q16540 153 aaKnown RBP12.18□□□□□ -0.46
TNIP1-220ENST00000610535 TRAV13-1A0A0B4J241 112 aa12.17□□□□□ -0.46
TNIP1-220ENST00000610535 IGLV5-39A0A0G2JS06 123 aa12.17□□□□□ -0.46
TNIP1-220ENST00000610535 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
TNIP1-220ENST00000610535 ACANP16112 2415 aa12.17□□□□□ -0.46
TNIP1-220ENST00000610535 A8MTW9 85 aa12.17□□□□□ -0.46
TNIP1-220ENST00000610535 COX7A2LO14548 114 aa12.16□□□□□ -0.46
TNIP1-220ENST00000610535 ZNF702PQ9H963 129 aa12.16□□□□□ -0.46
TNIP1-220ENST00000610535 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
TNIP1-220ENST00000610535 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
TNIP1-220ENST00000610535 PIK3CD-AS1Q5SR53 167 aa12.16□□□□□ -0.46
TNIP1-220ENST00000610535 HIST2H2BCQ6DN03 193 aa12.15□□□□□ -0.46
TNIP1-220ENST00000610535 NIPBLQ6KC79 2804 aaeCLIP12.15□□□□□ -0.46
TNIP1-220ENST00000610535 SMIM1B2RUZ4 78 aa12.15□□□□□ -0.47
TNIP1-220ENST00000610535 RS1O15537 224 aa12.15□□□□□ -0.47
TNIP1-220ENST00000610535 HERVK_113P63121 156 aa12.15□□□□□ -0.47
TNIP1-220ENST00000610535 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.47
TNIP1-220ENST00000610535 SMCR5Q8TEV8 140 aa12.15□□□□□ -0.47
TNIP1-220ENST00000610535 MAP6D1Q9H9H5 199 aa12.15□□□□□ -0.47
TNIP1-220ENST00000610535 TRBV7-7A0A0K0K1E9 115 aa12.14□□□□□ -0.47
TNIP1-220ENST00000610535 HERV-K104P63124 156 aa12.14□□□□□ -0.47
TNIP1-220ENST00000610535 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
TNIP1-220ENST00000610535 PRIMA1Q86XR5 153 aa12.14□□□□□ -0.47
TNIP1-220ENST00000610535 XCL2Q9UBD3 114 aa12.14□□□□□ -0.47
TNIP1-220ENST00000610535 VPREB3Q9UKI3 123 aa12.14□□□□□ -0.47
TNIP1-220ENST00000610535 MTORP42345 2549 aa12.13□□□□□ -0.47
TNIP1-220ENST00000610535 DAZ2Q13117 558 aaKnown RBP12.13□□□□□ -0.47
TNIP1-220ENST00000610535 DAZ4Q86SG3 579 aaKnown RBP12.13□□□□□ -0.47
TNIP1-220ENST00000610535 DAZ3Q9NR90 486 aaKnown RBP12.13□□□□□ -0.47
TNIP1-220ENST00000610535 ITPR3Q14573 2671 aa12.13□□□□□ -0.47
TNIP1-220ENST00000610535 WNK1Q9H4A3 2382 aa12.12□□□□□ -0.47
TNIP1-220ENST00000610535 FLNAP21333 2647 aaKnown RBP12.12□□□□□ -0.47
TNIP1-220ENST00000610535 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
TNIP1-220ENST00000610535 FAM218AQ96MZ4 157 aa12.12□□□□□ -0.47
TNIP1-220ENST00000610535 BAALC-AS2P0C853 105 aa12.11□□□□□ -0.47
TNIP1-220ENST00000610535 LINC01356Q8N9X3 169 aa12.11□□□□□ -0.47
TNIP1-220ENST00000610535 ZNF843Q8N446 348 aa12.11□□□□□ -0.47
TNIP1-220ENST00000610535 TRGV1A0A0A0MS02 117 aa12.1□□□□□ -0.47
TNIP1-220ENST00000610535 INSP01308 110 aa12.1□□□□□ -0.47
TNIP1-220ENST00000610535 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
TNIP1-220ENST00000610535 C22orf24Q9Y442 160 aa12.1□□□□□ -0.47
TNIP1-220ENST00000610535 Q9HAA7 133 aa12.1□□□□□ -0.47
TNIP1-220ENST00000610535 ITPR2Q14571 2701 aa12.09□□□□□ -0.47
TNIP1-220ENST00000610535 DYNLRB2Q8TF09 96 aa12.09□□□□□ -0.47
TNIP1-220ENST00000610535 Q96MF0 132 aa12.09□□□□□ -0.47
TNIP1-220ENST00000610535 F5H768 121 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms